Gchil5811.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5811.t1
Unique NameGchil5811.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length296
Homology
BLAST of Gchil5811.t1 vs. uniprot
Match: A0A2V3IFE3_9FLOR (Protein hedgehog n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFE3_9FLOR)

HSP 1 Score: 208 bits (529), Expect = 3.880e-63
Identity = 94/178 (52.81%), Postives = 136/178 (76.40%), Query Frame = 0
Query:  100 LEDIMQMLQQCFPGNSNVEVENIGTVRMNQLESGHKVAQMSGDSSEVFSFTHKLGSGVFRFKKLCSVEKCVTASPGHYIFSKDKLVAAGSVRIGDYLQMGNGSLVRVSSVENVWRRGLYNPQTVSGELVVDGFRVSSYTMAVRPNVAQTLLAPLRAAYRVLGTDITGGTLANIGAPWI 277
            +E++++ ++ CFPGN+ V+VENIG V M  L +G +V Q +G  SEVF F+H+L + +  F+++C+V KC+TAS GHYI++K KLVAAG+++ GD+L  G      V   E+VW +GLYNP T++GE VV+GFRVS YT AVRP++A+TLL+PLRAA+RV+G DI+GG LA++  PW+
Sbjct:   50 IEELIEQVESCFPGNAAVKVENIGWVPMRNLRTGDRVLQANGAYSEVFGFSHRLRTSIHPFRRICTVTKCMTASHGHYIYTKQKLVAAGAIKAGDFLATGVDEYEAVIGSEDVWEQGLYNPHTLTGEFVVEGFRVSCYTTAVRPDLAKTLLSPLRAAFRVIGADISGGLLASVRQPWM 227          
BLAST of Gchil5811.t1 vs. uniprot
Match: A0A2V3IGM3_9FLOR (Sonic hedgehog protein A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGM3_9FLOR)

HSP 1 Score: 148 bits (374), Expect = 6.050e-39
Identity = 79/172 (45.93%), Postives = 111/172 (64.53%), Query Frame = 0
Query:  110 CFPGNSNVEVENIGTVRMNQLESGHKV--AQMSGDS--SEVFSFTHKLGSGVFRFKKLCSVEKCVTASPGHYIFSKDKLVAAGSVRIGDYLQMGNGSLVRVSSVENVWRRGLYNPQTVSGELVVDGFRVSSYTMAVRPNVAQTLLAPLRAAYRVLGTDITGGTLANIGAPWI 277
            CFP ++ V   + G +R++QL+ G KV  A++  +S  S VF+F+H++    F FK + + E  +  S GHY++++D L AA ++R  D LQ+ +GS   V  V NVW +GLYNP T  GEL+VDGFRVSSYT +VR NVA  LLAP+RAA+ +L  DIT G   +    WI
Sbjct:  143 CFPASAVVTTLDRGAIRISQLQLGDKVLVAKVGTNSTYSTVFTFSHRIDHSWFPFKSIETEEGTLVVSAGHYVYTRDTLRAAKTLRPNDELQLADGSFTPVQRVHNVWEKGLYNPHTELGELLVDGFRVSSYTTSVRTNVATALLAPVRAAFALLRVDITAGLFEHSVHSWI 314          
BLAST of Gchil5811.t1 vs. uniprot
Match: UPI001E1DDBBD (warthog protein 6-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDBBD)

HSP 1 Score: 126 bits (317), Expect = 8.800e-31
Identity = 65/153 (42.48%), Postives = 94/153 (61.44%), Query Frame = 0
Query:  110 CFPGNSNVEVENIGTVRMNQLESGHKVAQMSGDSSEVFSFTHKLGSGVFRFKKLC-SVEKCVTASPGHYIFSKDKLVAAGSVRIGDYLQMGNGSLVRVSSVENVWRRGLYNPQTVSGELVVDGFRVSSYTMAVRPNVAQTLLAPLRAAYRVLG 261
            CFPG++ VE+E+    RM++++ G +V     + SEVF FTHK  +G++ F K+  S    V+ + GHYI     L AA  V +GD LQ+G G    V+ V  V  +G+YNPQT+ G++VV G RVS+YT AV P +A   L  +R+ YR+ G
Sbjct:  132 CFPGSAMVELESGARQRMDKMKIGDRVKVGRAEFSEVFMFTHKTHTGIYDFVKITTSSGHSVSLTGGHYIHVNGGLAAASVVAVGDMLQLGTGEATEVTDVTCVQSKGIYNPQTLHGDIVVGGIRVSTYTTAVEPRLAHAGLGAIRSMYRIFG 284          
BLAST of Gchil5811.t1 vs. uniprot
Match: A0A1X6P3Y5_PORUM (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3Y5_PORUM)

HSP 1 Score: 127 bits (319), Expect = 1.970e-29
Identity = 65/156 (41.67%), Postives = 96/156 (61.54%), Query Frame = 0
Query:  110 CFPGNSNVEVENIGTVRMNQLESGHKVAQMSGDSSEVFSFTHKLGSGVFRFKKLCSVEKC-VTASPGHYIFSKDKLVAAGSVRIGDYLQM-GNGSLVRVSSVENVWRRGLYNPQTVSGELVVDGFRVSSYTMAVRPNVAQTLLAPLRAAYRVLGTD 263
            CFP ++ VE++   TV M+QL  G  V   +   S VF FTHK+ +G F F KL +     +T +  HY+++  K+ AAG+V++GD L++ G      V+++  +   GLYNPQT+ G++VV+G R S++T AV P VA  LLAPLRA +R  G  
Sbjct:  429 CFPASAEVELDTGRTVTMDQLAVGDNVRVSADAFSRVFLFTHKIATGSFGFVKLTTASAASLTVTRSHYVYANGKMTAAGAVKLGDKLELVGAAKCDIVTAISPITETGLYNPQTLHGDIVVNGIRASTFTTAVEPRVASALLAPLRALFRATGVS 584          
BLAST of Gchil5811.t1 vs. uniprot
Match: R7QIA6_CHOCR (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIA6_CHOCR)

HSP 1 Score: 125 bits (315), Expect = 2.130e-29
Identity = 64/153 (41.83%), Postives = 95/153 (62.09%), Query Frame = 0
Query:  110 CFPGNSNVEVENIGTVRMNQLESGHKVAQMSGDSSEVFSFTHKLGSGVFRFKKLCSVEKC-VTASPGHYIFSKDKLVAAGSVRIGDYLQMGNGSLVRVSSVENVWRRGLYNPQTVSGELVVDGFRVSSYTMAVRPNVAQTLLAPLRAAYRVLG 261
            CFP +++VE+EN     M Q+E G +V    G  S+VF FTHK  S V  F ++ +     ++A+ GHYI+  +   AAGS ++GD L++G+GS   VS+V  V   GL+NPQTV G+++V+  R S++T  + P+ AQ +LAPLR  Y   G
Sbjct:  285 CFPADASVELENGSFKTMAQVELGDRVKVADGSFSDVFMFTHKDASAVHDFVRISTRSGASLSATRGHYIYINNAFAAAGSAKVGDTLELGDGSKTLVSNVGIVKGTGLFNPQTVHGDIIVNSVRASTFTRTIEPSAAQAMLAPLRMLYDTFG 437          
BLAST of Gchil5811.t1 vs. uniprot
Match: A0A1X6PD14_PORUM (Hint domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PD14_PORUM)

HSP 1 Score: 126 bits (317), Expect = 2.840e-29
Identity = 67/163 (41.10%), Postives = 100/163 (61.35%), Query Frame = 0
Query:  110 CFPGNSNVEVENIGTVRMNQLESGHKVAQMSGDSSEVFSFTHKLGSGVFRFKKLCSVEKCVTASPGHYIFSKDKLVAAGSVRIGDYLQMGNGSLVRVSSVENVWRRGLYNPQTVSGELVVDGFRVSSYTMAVRPNVAQTLLAPLRAAYR----VLGTDITGGT 268
            CFP ++ + + +   V ++ L +GH V       SEVF F+HK+  G   F +L +    +T S GHY+++   L AA +V +GD L+  +G+ V VS++  V   GLY P T+ G++VVDGFRVS+YT AV P +A  LLAP+RAAYR    ++G  + GG+
Sbjct:  385 CFPASAALTLADGTAVGVDILATGHTVRVGKAAHSEVFLFSHKVAGGDHPFLRLTTAAGALTLSAGHYVYANGGLKAAAAVAVGDTLETADGATVPVSAITAVRASGLYAPHTLHGDVVVDGFRVSTYTTAVEPRLAHALLAPVRAAYRAGYQLVGDRLEGGS 547          
BLAST of Gchil5811.t1 vs. uniprot
Match: A0A1X6P3R7_PORUM (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3R7_PORUM)

HSP 1 Score: 127 bits (318), Expect = 3.460e-29
Identity = 66/154 (42.86%), Postives = 95/154 (61.69%), Query Frame = 0
Query:  110 CFPGNSNVEVENIGTVRMNQLESGHKVAQMSGDSSEVFSFTHKLGSGVFRFKKLCSVEKC-VTASPGHYIFSKDKLVAAGSVRIGDYLQM-GNGSLVRVSSVENVWRRGLYNPQTVSGELVVDGFRVSSYTMAVRPNVAQTLLAPLRAAYRVLG 261
            CFP ++ VE++   TV M+QL  G  V   +   S VF FTHK+ SG F F KL +     +T +  HY+++  K+ AAG+V++GD L++ G      +++   V   GLYNPQT+ G++VV+G R S++T AV P VA  LLAPLRA +R  G
Sbjct:  493 CFPASAEVELDTGRTVTMDQLAVGDNVRVAADAFSRVFLFTHKIASGSFAFVKLTTASGASLTVTRSHYVYANGKMTAAGAVKLGDKLELVGAAKCDIITATSPVTETGLYNPQTLHGDIVVNGIRASTFTTAVEPRVASALLAPLRALFRATG 646          
BLAST of Gchil5811.t1 vs. uniprot
Match: A0A2V3IRZ6_9FLOR (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRZ6_9FLOR)

HSP 1 Score: 124 bits (312), Expect = 4.810e-29
Identity = 62/153 (40.52%), Postives = 94/153 (61.44%), Query Frame = 0
Query:  110 CFPGNSNVEVENIGTVRMNQLESGHKVAQMSGDSSEVFSFTHKLGSGVFRFKKLCSVEKC-VTASPGHYIFSKDKLVAAGSVRIGDYLQMGNGSLVRVSSVENVWRRGLYNPQTVSGELVVDGFRVSSYTMAVRPNVAQTLLAPLRAAYRVLG 261
            CFP  + VE+E+  T RM+Q++ G +V       SEVF FTHK+   V +F KL       ++A+ GHY++   +L AA + ++GD +++GNG+   V  V  V + GLYNPQT+ G+++V+  R S++T A+    AQ +LAPLR  Y V G
Sbjct:  272 CFPAEATVEMEDGSTKRMDQVQIGDRVKVGYDMFSEVFMFTHKVSKRVSQFVKLDMASGASISATSGHYVYLNGRLAAARTAKVGDVMELGNGARSTVEKVSMVRKSGLYNPQTLHGDIIVNEVRASTFTTAIEAGTAQAMLAPLRMVYDVFG 424          
BLAST of Gchil5811.t1 vs. uniprot
Match: A0A1X6P3Z4_PORUM (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3Z4_PORUM)

HSP 1 Score: 123 bits (309), Expect = 5.250e-29
Identity = 64/156 (41.03%), Postives = 94/156 (60.26%), Query Frame = 0
Query:  110 CFPGNSNVEVENIGTVRMNQLESGHKVAQMSGDSSEVFSFTHKLGSGVFRFKKLCSVEKC-VTASPGHYIFSKDKLVAAGSVRIGDYLQM-GNGSLVRVSSVENVWRRGLYNPQTVSGELVVDGFRVSSYTMAVRPNVAQTLLAPLRAAYRVLGTD 263
            CFP ++ VE++   TV M+QL  G  V   +   S VF FTHK+ +G F F KL +     +T +  HY+++  K+ AAG+V++GD L++ G      +++   V   GLYNPQT+ G++ V+G R S++T AV P VA  LLAPLRA +R  G  
Sbjct:  208 CFPASAQVELDTGRTVTMDQLAVGDNVRVSADAFSRVFLFTHKVAAGSFPFVKLTTASGASLTVTRSHYVYANGKMTAAGAVKLGDELELVGAAKCDIITATSPVTETGLYNPQTLHGDIFVNGIRASTFTTAVEPRVASALLAPLRALFRATGVS 363          
BLAST of Gchil5811.t1 vs. uniprot
Match: A0A1X6P5S6_PORUM (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P5S6_PORUM)

HSP 1 Score: 120 bits (302), Expect = 3.260e-28
Identity = 71/165 (43.03%), Postives = 95/165 (57.58%), Query Frame = 0
Query:  110 CFPGNSNVEVENIGTVRMNQLESGHKVAQMSGDS----SEVFSFTHKLGSGVFRFKKLCSVE--KCVTASPGHYIFSKDKLVAAGSVRIGDYLQM----GNGSLVRVSSVENVWRRGLYNPQTVSGELVVDGFRVSSYTMAVRPNVAQTLLAPLRAAYRVLGTDI 264
            CFP  +  E+ +   V M  L  G KV   +GD     S VF FTHKL +    + +L + E    +TAS GHY+++  +LVAA +V +GD LQ+    G  +   V+ V  V   GLYNPQT+ G++VVDG R S++T AV P VA  LLAPLRA YR  G  +
Sbjct:  133 CFPAAATAELADGRVVAMADLAVGDKVRVAAGDGPAAFSAVFLFTHKLPTPPRSYVRLTTSEGGAALTASAGHYVYAGGRLVAAAAVAVGDTLQVVAPGGGWATATVTGVRRVDAAGLYNPQTLHGDIVVDGVRASTFTTAVEPAVASALLAPLRAVYRSTGRSV 297          
The following BLAST results are available for this feature:
BLAST of Gchil5811.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFE3_9FLOR3.880e-6352.81Protein hedgehog n=1 Tax=Gracilariopsis chorda Tax... [more]
A0A2V3IGM3_9FLOR6.050e-3945.93Sonic hedgehog protein A n=1 Tax=Gracilariopsis ch... [more]
UPI001E1DDBBD8.800e-3142.48warthog protein 6-like n=1 Tax=Mercenaria mercenar... [more]
A0A1X6P3Y5_PORUM1.970e-2941.67HintN domain-containing protein n=1 Tax=Porphyra u... [more]
R7QIA6_CHOCR2.130e-2941.83HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A1X6PD14_PORUM2.840e-2941.10Hint domain-containing protein n=1 Tax=Porphyra um... [more]
A0A1X6P3R7_PORUM3.460e-2942.86HintN domain-containing protein n=1 Tax=Porphyra u... [more]
A0A2V3IRZ6_9FLOR4.810e-2940.52Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
A0A1X6P3Z4_PORUM5.250e-2941.03HintN domain-containing protein n=1 Tax=Porphyra u... [more]
A0A1X6P5S6_PORUM3.260e-2843.03HintN domain-containing protein n=1 Tax=Porphyra u... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001767Hedgehog protein, Hint domainPFAMPF01079Hintcoord: 108..259
e-value: 1.3E-19
score: 70.6
NoneNo IPR availableGENE3D2.170.16.10Hedgehog/Intein (Hint) domaincoord: 110..238
e-value: 1.0E-22
score: 83.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..61
NoneNo IPR availablePANTHERPTHR11889HEDGEHOGcoord: 106..260
NoneNo IPR availablePANTHERPTHR11889:SF31PROTEIN HEDGEHOGcoord: 106..260
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..295
NoneNo IPR availableCDDcd00081Hintcoord: 110..235
e-value: 2.68981E-10
score: 55.353
NoneNo IPR availableTMHMMTMhelixcoord: 2..24
IPR036844Hint domain superfamilySUPERFAMILY51294Hedgehog/intein (Hint) domaincoord: 110..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004449_piloncontigtig00004449_pilon:407898..408785 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5811.t1Gchil5811.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004449_pilon 407898..408785 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5811.t1 ID=Gchil5811.t1|Name=Gchil5811.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=296bp
MGILTAFAFVIILLVTALALPLGEQSGYSEASARLFVQDTDIDKGNIDRQ
MMSSGTGEEATPSPSYDPDEEDGHDGEEDHYNEDGHDNEIEDDESGDQGL
EDIMQMLQQCFPGNSNVEVENIGTVRMNQLESGHKVAQMSGDSSEVFSFT
HKLGSGVFRFKKLCSVEKCVTASPGHYIFSKDKLVAAGSVRIGDYLQMGN
GSLVRVSSVENVWRRGLYNPQTVSGELVVDGFRVSSYTMAVRPNVAQTLL
APLRAAYRVLGTDITGGTLANIGAPWIGAAALGGKACIGLSGLSC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001767Hedgehog_Hint
IPR036844Hint_dom_sf