Gchil5808.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5808.t1
Unique NameGchil5808.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length91
Homology
BLAST of Gchil5808.t1 vs. uniprot
Match: A0A7S3A2U0_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A2U0_9RHOD)

HSP 1 Score: 61.6 bits (148), Expect = 4.790e-10
Identity = 37/69 (53.62%), Postives = 47/69 (68.12%), Query Frame = 0
Query:   10 EALQLYRDILRTARIFRGQTNDKMQNMESELRKSARREFEQNRTLISREDICRSLVVGRDALHQIQEKI 78
            EA++LYRDILRT R F   TN+  +     L KSAR+EFE N+ L S E + RSL+VGR AL Q QE++
Sbjct:    9 EAIRLYRDILRTCRAFTW-TNEAGERWGVVLAKSARKEFEMNKFLSSPEQVARSLLVGRSALDQTQERV 76          
BLAST of Gchil5808.t1 vs. uniprot
Match: I1HA04_BRADI (Complex1_LYR_dom domain-containing protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=I1HA04_BRADI)

HSP 1 Score: 54.7 bits (130), Expect = 3.590e-7
Identity = 37/77 (48.05%), Postives = 48/77 (62.34%), Query Frame = 0
Query:    4 LSSLRHEALQLYRDILRTARIFRGQTNDKMQNMESELRKSARREFEQNRTLISREDICRSLVVGRDALHQIQEKIAE 80
            L+S R EAL LYRDILR AR+F       +   E+ LR +ARREFE+ R     E + R L+ GRDA+ Q  E++AE
Sbjct:   75 LTSTRREALALYRDILRAARLFEWPDERGVPWREA-LRANARREFEEARGERDPEVVARLLIGGRDAVEQALERVAE 150          
BLAST of Gchil5808.t1 vs. uniprot
Match: A0A1D6JMZ3_MAIZE (LYR family of Fe/S cluster biogenesis protein n=5 Tax=Andropogoneae TaxID=147429 RepID=A0A1D6JMZ3_MAIZE)

HSP 1 Score: 54.3 bits (129), Expect = 4.170e-7
Identity = 36/77 (46.75%), Postives = 48/77 (62.34%), Query Frame = 0
Query:    4 LSSLRHEALQLYRDILRTARIFRGQTNDKMQNMESELRKSARREFEQNRTLISREDICRSLVVGRDALHQIQEKIAE 80
            L+S R EAL LYRDILR AR+F   T+D+       LR +ARREFE  R     E + R L+ GRDA+ Q  +++A+
Sbjct:   63 LTSSRREALALYRDILRAARLF-AWTDDRGVPWREVLRANARREFEDARGERDPEVVARLLIGGRDAVQQALDRLAD 138          
BLAST of Gchil5808.t1 vs. uniprot
Match: A9SE50_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SE50_PHYPA)

HSP 1 Score: 52.4 bits (124), Expect = 1.710e-6
Identity = 41/88 (46.59%), Postives = 49/88 (55.68%), Query Frame = 0
Query:    2 GSLSSLRHEALQLYRDILRTARIFRGQTNDKMQNMESELRKSARREFEQNRTLISREDICRSLVVGRDALHQIQEKI---AEKVTKNE 86
              L++ R EAL LYR+ILRT R+F   TN+        LR S R EFEQ R     E I R LVVGRDA+    EK    AE++ K E
Sbjct:   39 AGLTTSRREALALYREILRTTRLFTW-TNEHGVPWRDLLRDSTRLEFEQARYETDPEVIARLLVVGRDAVQAAIEKFSVKAEELIKKE 125          
BLAST of Gchil5808.t1 vs. uniprot
Match: G5ACF1_PHYSP (Complex1_LYR_dom domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=G5ACF1_PHYSP)

HSP 1 Score: 51.2 bits (121), Expect = 1.900e-6
Identity = 32/74 (43.24%), Postives = 45/74 (60.81%), Query Frame = 0
Query:    8 RHEALQLYRDILRTARIFRGQTNDKMQNMESELRKSARREFEQNRTLISREDICRSLVVGRDALHQIQEKIAEK 81
            R E L+LYR+ILRT R+F    N++ Q     L+K+AR E EQNR     E I + ++ G   L ++QEK+ EK
Sbjct:    6 RKEVLRLYREILRTTRMF-PHRNEQGQLWSDVLQKNARMEIEQNRYETDGETISKRILFGWKCLQEVQEKVMEK 78          
BLAST of Gchil5808.t1 vs. uniprot
Match: H3GY39_PHYRM (Complex1_LYR_dom domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GY39_PHYRM)

HSP 1 Score: 50.8 bits (120), Expect = 7.380e-6
Identity = 32/74 (43.24%), Postives = 45/74 (60.81%), Query Frame = 0
Query:    8 RHEALQLYRDILRTARIFRGQTNDKMQNMESELRKSARREFEQNRTLISREDICRSLVVGRDALHQIQEKIAEK 81
            R E L+LYR+ILRT R+F    N++ Q   + L K+AR E EQNR     E I + ++ G   L ++QEK+ EK
Sbjct:   59 RKEVLRLYREILRTTRMF-PHLNEQGQPWSTVLHKNARMEIEQNRYETDGETISKRILFGWKCLQEVQEKMMEK 131          
The following BLAST results are available for this feature:
BLAST of Gchil5808.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A7S3A2U0_9RHOD4.790e-1053.62Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
I1HA04_BRADI3.590e-748.05Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A1D6JMZ3_MAIZE4.170e-746.75LYR family of Fe/S cluster biogenesis protein n=5 ... [more]
A9SE50_PHYPA1.710e-646.59Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
G5ACF1_PHYSP1.900e-643.24Complex1_LYR_dom domain-containing protein n=12 Ta... [more]
H3GY39_PHYRM7.380e-643.24Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR protein domainPFAMPF05347Complex1_LYRcoord: 10..72
e-value: 5.7E-9
score: 35.9
NoneNo IPR availablePANTHERPTHR47484COMPLEX 1 PROTEIN CONTAINING PROTEIN, EXPRESSEDcoord: 4..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004449_piloncontigtig00004449_pilon:337619..337968 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5808.t1Gchil5808.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004449_pilon 337619..337968 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5808.t1 ID=Gchil5808.t1|Name=Gchil5808.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=91bp
MGSLSSLRHEALQLYRDILRTARIFRGQTNDKMQNMESELRKSARREFEQ
NRTLISREDICRSLVVGRDALHQIQEKIAEKVTKNEPDDI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR_dom