Gchil5795.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5795.t1
Unique NameGchil5795.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length447
Homology
BLAST of Gchil5795.t1 vs. uniprot
Match: A0A2V3IF97_9FLOR (Protein REVEILLE 8 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF97_9FLOR)

HSP 1 Score: 290 bits (741), Expect = 2.440e-90
Identity = 213/473 (45.03%), Postives = 249/473 (52.64%), Query Frame = 0
Query:    1 MSNSSPVGERDRKAARKKYVLTKRREYWTPDEHNRFLTALALYGREWKAIERDVATKTAVQIRSHAQKYFLRLERSRSAVLHTIPPPRPRRSXARSADAPASGSVPPYRSTSHSSSLQHQLLAPAP---QHFVSSTPVSIAPAAPASLRAHVTSSHSMYQYAPYRTPSYRYYAPHLLQPAAPYYSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYYCT-AMGVGRQPVVVPP-----HAPAASRDRSVGATQQPPQRTTTGAPMAVEGHTPAAVTPNATLPVKLARVQHQQQS---------RKRAVNSTDDLTPEQSEPKR---------QEMANTHSTQRPSSPQATLPCAPSTHNSSHGSSADEAQRQPKKDAHSDGKRSPSAGSSGFEADIDTCSGGSINGEAASRRFHRGRAAIVCQDGHVPPKVHQHEGDCMVASRLLALWTAAPPESKRMEKNVRGANRAAMQC 446
            MS+SS   ER+RK ARKKYVLTKRR YWTPDEH RFLTALALYGREWKAIERDVATKTA+QIRSHAQKYFLRLER RSA LH IPPPR    X              Y  +S S S  H +LAPAP   Q+  +S+ VSIAPA P+S  A VTS H +Y Y PY  PS+RYY+P  +   +PYYS+                             +YYCT A  V     + PP     H P +                    P  +      A  P +  P+K     H   S          KR  +++ +     S  KR          + A +H T   SSP+                   EAQR  KKDA S GKRS SAGSSG EADIDTCS  S +GE+  R+FH  RAA+VCQDGHVPPK+ QHEGDCMVASRLLALW AAP       K+ + A    +QC
Sbjct:    1 MSSSSRGAERERKVARKKYVLTKRRVYWTPDEHKRFLTALALYGREWKAIERDVATKTAIQIRSHAQKYFLRLERDRSAALHAIPPPRXXXXXXXXXXXXXXXXTHSYPPSSLSPSRPH-VLAPAPSPSQYNAASSTVSIAPAVPSSTPAPVTSYHPVYPYPPYTHPSHRYYSPPFMHHVSPYYSAYHPHPQPHPR-------------------SYYCTSACHVWPNSTIAPPPTHPHHLPDS--------------------PAVLYSSDLQANAPTSARPIKSVHPPHIMPSSRHPSXXLXHKRPPSNSHNPQEGHSPLKRLHLQYPAQNSQTAPSHQTLPKSSPEXXXXXXXXXXXXXXXXXXVEAQR--KKDADSIGKRSSSAGSSGNEADIDTCSALSTSGESQCRKFHARRAAVVCQDGHVPPKIQQHEGDCMVASRLLALWIAAPTLPNPAPKDTQPAEGTPVQC 431          
BLAST of Gchil5795.t1 vs. uniprot
Match: R7QH86_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QH86_CHOCR)

HSP 1 Score: 172 bits (436), Expect = 1.380e-43
Identity = 216/546 (39.56%), Postives = 259/546 (47.44%), Query Frame = 0
Query:   17 KKYVLTKRREYWTPDEHNRFLTALALYGREWKAIERDVATKTAVQIRSHAQKYFLRLERSRSAVLHTIPPPRPRRSXARSADAPASGSVPP----YRSTSHSSSLQHQL----------LAPAPQ-HFVSSTPVSIAPAAPASLRAHVTSSHSMYQYAPYRT--------------PSYRYYAPHLLQPA-APYYSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYYCTAMGVG--------RQP---VVVPPH---APAASRDRSVGATQQPPQRTTT---GAPMAVEGHTPAAVTPNAT-----------------------LPVKLAR----------VQHQQQSRKRAVNST---DDLTPEQSEPKRQEMANTHSTQRPSSPQATLPCAPSTHNSSHGSSADEAQRQPKKDAHS-------------------------------------DGKRSPSAGSSGFE----------------ADIDTCSGGSINGEAASRRFHRGRAAIVCQDGHVPPKVHQHEGDCMVASRLLALWTAAP 426
            KKYVLTKRREYWT DEH RF+TALALYGREWKAIERDVATKTAVQIRSHAQKYFLRLERSRSA L  IPPPRPR+S A                 +R  +H  +  H            L P P  H     PV IAPAAP +       + S  Q AP                 P   Y APH  QPA + YY+ X  XXXXXXXXXXXXXXXXXXXXXXXXXX  + + + V         RQP   VV+P      P  S  +S   +   P  +     G+  + +G  P     N++                       LP+  A+          V H + SRKR  +     +  T + S  KR+E+      +     Q ++  A  +H     + + + + QPK++                                        DG  + S GS  FE                ADID+ SGGS  GE A+RR HRGRAAIVC+DGHVPP V QHEGDCMVASRLLALW AAP
Sbjct:  127 KKYVLTKRREYWTDDEHKRFITALALYGREWKAIERDVATKTAVQIRSHAQKYFLRLERSRSAALLHIPPPRPRKSRAXXXXXXXXXXXXXXXMHHRYPTHPLAFAHPYPHALAPPSRPLFPVPNSHTPHPAPVVIAPAAPHAAPHAALPAASRPQCAPPXXXXXXXXXXXXXLPYPPATYQAPH--QPAQSSYYAPXTHXXXXXXXXXXXXXXXXXXXXXXXXXXPNFYSHVQVPPSTHLPHVRQPQGRVVMPRREQPVPGTSPVQSGDMSSTIPSNSLPSPGGSGTSTDGDKPRLGYGNSSGDKPPKAHLTRTRAHIGIPLLPSLPLGFAKKPVSSVDSKDVDHPK-SRKRTASGASIGNQHTADASPSKRRELIEPSEQKHRVQAQPSISMAVQSHTDKAEAPSIKNKPQPKEETRKPNVEPANGRDFQSLPIDSPQAAAIEMEMSLPEPPERRDGGDTGSGGS--FEKPRSSXXXXXXXXXXXADIDS-SGGSGTGETAARRLHRGRAAIVCKDGHVPPAVDQHEGDCMVASRLLALWNAAP 666          
BLAST of Gchil5795.t1 vs. uniprot
Match: A0A7S0XIU6_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XIU6_9RHOD)

HSP 1 Score: 109 bits (272), Expect = 4.150e-24
Identity = 66/130 (50.77%), Postives = 83/130 (63.85%), Query Frame = 0
Query:   16 RKKYVLTKRREYWTPDEHNRFLTALALYGREWKAIERDVATKTAVQIRSHAQKYFLRLERSRSAVLHTIPPPRPRRSXA-RSADAPASGSVPPYRSTSHSSSLQHQLLAPAPQHFVSSTPVSIAPAAPAS 144
            RK Y LTK+REYWT  EHN F+ AL  YGREWK+I+R++ TKTAVQIRSHAQKYF++LER+   +L  IPPPR R+S   R + A +S  V    + +    LQH L     +H   S  V  A AA +S
Sbjct:   20 RKPYELTKQREYWTDSEHNSFVRALEKYGREWKSIQREIGTKTAVQIRSHAQKYFMKLERTAPEMLARIPPPRARKSRVQRLSSAVSSTGVSTQAAPTMGRVLQHPLRGAVSKHVPRSGLVISAGAAKSS 149          
BLAST of Gchil5795.t1 vs. uniprot
Match: A0A7S0G3T7_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G3T7_9RHOD)

HSP 1 Score: 104 bits (260), Expect = 8.600e-23
Identity = 50/69 (72.46%), Postives = 59/69 (85.51%), Query Frame = 0
Query:   16 RKKYVLTKRREYWTPDEHNRFLTALALYGREWKAIERDVATKTAVQIRSHAQKYFLRLERSRSAVLHTI 84
            RKKYVLTKRREYWT +EH+RF+ ALA++GREWK IE+ V TKTAVQIRSHAQKYFLR+ER + +   TI
Sbjct:   28 RKKYVLTKRREYWTEEEHSRFVKALAMHGREWKLIEQKVGTKTAVQIRSHAQKYFLRMERMKKSGTPTI 96          
BLAST of Gchil5795.t1 vs. uniprot
Match: A0A7S1EQ36_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQ36_9RHOD)

HSP 1 Score: 103 bits (258), Expect = 2.870e-22
Identity = 52/79 (65.82%), Postives = 62/79 (78.48%), Query Frame = 0
Query:   16 RKKYVLTKRREYWTPDEHNRFLTALALYGREWKAIERDVATKTAVQIRSHAQKYFLRLERSRSAVLH---TIPPPRPRR 91
            RKKYVLTKRREYWT  EH+RF++AL  YGR+WK IE  V TK+AVQIRSHAQKYF+RLER+  +       +PPPRPR+
Sbjct:   26 RKKYVLTKRREYWTDGEHSRFVSALMEYGRDWKQIELAVGTKSAVQIRSHAQKYFIRLERNEVSAKDENIVVPPPRPRK 104          
BLAST of Gchil5795.t1 vs. uniprot
Match: UPI001E1DCF45 (transcription factor MYB1R1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DCF45)

HSP 1 Score: 108 bits (269), Expect = 2.990e-22
Identity = 50/65 (76.92%), Postives = 60/65 (92.31%), Query Frame = 0
Query:   15 ARKKYVLTKRREYWTPDEHNRFLTALALYGREWKAIERDVATKTAVQIRSHAQKYFLRLERSRSA 79
            ARKKYVLTKRR+YWTP+EH RF+TALA++GR+WKAIE  V +KTAVQIRSHAQKYFLRL+R+ +A
Sbjct:  131 ARKKYVLTKRRQYWTPEEHERFVTALAVHGRQWKAIEASVGSKTAVQIRSHAQKYFLRLDRANTA 195          
BLAST of Gchil5795.t1 vs. uniprot
Match: A8HVC6_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8HVC6_CHLRE)

HSP 1 Score: 98.2 bits (243), Expect = 1.570e-21
Identity = 49/81 (60.49%), Postives = 62/81 (76.54%), Query Frame = 0
Query:   15 ARKKYVLTKRREYWTPDEHNRFLTALALYGREWKAIERDVATKTAVQIRSHAQKYFLRLERSRSAVLHTIPPPRPRRSXAR 95
            ARK Y++TK+RE WT +EH RFL AL LYGR W+ IE  V+TKTAVQIRSHAQK+  +LER++ +    IPPPRP+R  +R
Sbjct:    2 ARKPYIITKQRERWTDEEHARFLEALKLYGRAWRKIEEHVSTKTAVQIRSHAQKFINKLERNKDS---GIPPPRPKRKPSR 79          
BLAST of Gchil5795.t1 vs. uniprot
Match: A8JHC0_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8JHC0_CHLRE)

HSP 1 Score: 95.5 bits (236), Expect = 2.220e-20
Identity = 50/88 (56.82%), Postives = 60/88 (68.18%), Query Frame = 0
Query:    4 SSPVGERDRKAARKKYVLTKRREYWTPDEHNRFLTALALYGREWKAIERDVATKTAVQIRSHAQKYFLRLERSRSAVLHTIPPPRPRR 91
            S  V +  R   RK+Y ++KRRE WT DEH RF+ AL LYGR W+ IE  V TKTAVQIRSHAQKYF +LE+        +PPPRP+R
Sbjct:   11 SVDVKDGSRLQTRKQYTVSKRRERWTDDEHQRFVEALKLYGRAWRKIEEYVGTKTAVQIRSHAQKYFNKLEKGERPT--GVPPPRPKR 96          
BLAST of Gchil5795.t1 vs. uniprot
Match: A0A2I0ISF0_PUNGR (Uncharacterized protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0ISF0_PUNGR)

HSP 1 Score: 95.1 bits (235), Expect = 7.300e-20
Identity = 47/92 (51.09%), Postives = 64/92 (69.57%), Query Frame = 0
Query:    3 NSSPVGERDRKAARKKYVLTKRREYWTPDEHNRFLTALALYGREWKAIERDVATKTAVQIRSHAQKYFLRLERSRSAVLHTIPPPRPRRSXA 94
            +S+P  E   K  RK Y +TK RE WT  EH++FL AL L+ R+WK IE  V +KT +QIRSHAQKYFL++++S ++    +PPPRP+R  A
Sbjct:   27 SSAPFSEDPSKKVRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKSGTS--EHVPPPRPKRKAA 116          
BLAST of Gchil5795.t1 vs. uniprot
Match: M2VWL0_GALSU (Circadian clock associated 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VWL0_GALSU)

HSP 1 Score: 101 bits (251), Expect = 1.500e-19
Identity = 48/70 (68.57%), Postives = 58/70 (82.86%), Query Frame = 0
Query:    9 ERDRKAARKKYVLTKRREYWTPDEHNRFLTALALYGREWKAIERDVATKTAVQIRSHAQKYFLRLERSRS 78
            ER  K+ RKKYVLTK+REYWT +EHNRFL  L  YGR WKAIE+ V TKTAVQ+RSHAQKYF+RL ++++
Sbjct:    3 ERIDKSRRKKYVLTKKREYWTDEEHNRFLVGLEQYGRNWKAIEKVVQTKTAVQVRSHAQKYFIRLAKNKT 72          
The following BLAST results are available for this feature:
BLAST of Gchil5795.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IF97_9FLOR2.440e-9045.03Protein REVEILLE 8 n=1 Tax=Gracilariopsis chorda T... [more]
R7QH86_CHOCR1.380e-4339.56Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0XIU6_9RHOD4.150e-2450.77Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A7S0G3T7_9RHOD8.600e-2372.46Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S1EQ36_9RHOD2.870e-2265.82Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
UPI001E1DCF452.990e-2276.92transcription factor MYB1R1-like n=1 Tax=Mercenari... [more]
A8HVC6_CHLRE1.570e-2160.49Predicted protein (Fragment) n=1 Tax=Chlamydomonas... [more]
A8JHC0_CHLRE2.220e-2056.82Predicted protein (Fragment) n=1 Tax=Chlamydomonas... [more]
A0A2I0ISF0_PUNGR7.300e-2051.09Uncharacterized protein n=1 Tax=Punica granatum Ta... [more]
M2VWL0_GALSU1.500e-1968.57Circadian clock associated 1 n=1 Tax=Galdieria sul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 24..72
e-value: 8.7E-11
score: 51.8
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 24..70
score: 6.295328
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 28..70
e-value: 1.18005E-8
score: 48.7258
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 25..69
e-value: 2.7E-11
score: 43.5
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 22..74
score: 17.593758
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 23..72
e-value: 2.6E-15
score: 54.4
NoneNo IPR availableGENE3D1.10.10.60coord: 28..73
e-value: 6.5E-15
score: 57.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..369
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 239..253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 342..356
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 308..341
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 277..298
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 11..112
NoneNo IPR availablePANTHERPTHR12802:SF55OS05G0162800 PROTEINcoord: 11..112
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 20..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004449_piloncontigtig00004449_pilon:214909..216249 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5795.t1Gchil5795.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004449_pilon 214909..216249 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5795.t1 ID=Gchil5795.t1|Name=Gchil5795.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=447bp
MSNSSPVGERDRKAARKKYVLTKRREYWTPDEHNRFLTALALYGREWKAI
ERDVATKTAVQIRSHAQKYFLRLERSRSAVLHTIPPPRPRRSRARSADAP
ASGSVPPYRSTSHSSSLQHQLLAPAPQHFVSSTPVSIAPAAPASLRAHVT
SSHSMYQYAPYRTPSYRYYAPHLLQPAAPYYSSYHHSHHHPHHHPHHHPH
HHPHQHPHNHAHAYYCTAMGVGRQPVVVPPHAPAASRDRSVGATQQPPQR
TTTGAPMAVEGHTPAAVTPNATLPVKLARVQHQQQSRKRAVNSTDDLTPE
QSEPKRQEMANTHSTQRPSSPQATLPCAPSTHNSSHGSSADEAQRQPKKD
AHSDGKRSPSAGSSGFEADIDTCSGGSINGEAASRRFHRGRAAIVCQDGH
VPPKVHQHEGDCMVASRLLALWTAAPPESKRMEKNVRGANRAAMQC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR006447Myb_dom_plants
IPR009057Homeobox-like_sf