Gchil5788.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5788.t1
Unique NameGchil5788.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length505
Homology
BLAST of Gchil5788.t1 vs. uniprot
Match: A0A2V3IHZ0_9FLOR (Protein IWS1-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHZ0_9FLOR)

HSP 1 Score: 454 bits (1169), Expect = 6.580e-153
Identity = 226/294 (76.87%), Postives = 262/294 (89.12%), Query Frame = 0
Query:  211 KPKTEFERVMDDAKALRRPRAKEVDGLAVTDDCLAFMEKMMKARDDDMRAYRSNKPALGKLKMLREVELMIMKTSHREIFLDNMLLTVIKKWLDPMPDGTLPNLAIRQSLLQILTDMPVDNDWIERLESSQGLGKVIHFLATKDTNAPNRRMAEKLMMKWSRVVYQNNANFHDLLEEYARPDNGNRIPTEGVAAERRNALNQLRTFKSSRQKLESIKPFPGKERAQVLAAVPRPSPMLYTTLAESEAVNHKAVRGGRVAKAMNRKVSKTIMDLRRNNKRGSARASRPSINGRDR 504
            +PK  F   MD  KA RRPRA+EVD  A+   C+ F+E+MMKARDDD+ AY++ +PAL KLKM+R+VELMIMKTSHR + LDNMLL+V+K WLDPMPDGTLPNL IRQ+LLQIL+DMPVDN+WIERLESSQGLGKVIHFLATKDT+ PNRR+AEKLMMKWSR+VYQNNANFHDLLEEYARPDNGNRIP EGVAAERR+A+NQLRTFKS+RQKLES+KP  G++R QVLAAVPRP+PMLYTTLAES+ VNH+++RGG+ +K+  RKVSKTI +LRR NKRGSARASRPSINGRDR
Sbjct:  212 QPKDAFTEAMDHVKARRRPRAREVDENAIETQCIDFLERMMKARDDDITAYKNGRPALNKLKMVRDVELMIMKTSHRLLLLDNMLLSVVKAWLDPMPDGTLPNLQIRQTLLQILSDMPVDNEWIERLESSQGLGKVIHFLATKDTHPPNRRVAEKLMMKWSRLVYQNNANFHDLLEEYARPDNGNRIPKEGVAAERRHAMNQLRTFKSTRQKLESVKPIDGRQREQVLAAVPRPAPMLYTTLAESDVVNHRSMRGGKSSKSSTRKVSKTISELRRFNKRGSARASRPSINGRDR 505          
BLAST of Gchil5788.t1 vs. uniprot
Match: R7QJS3_CHOCR (TFIIS N-terminal domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJS3_CHOCR)

HSP 1 Score: 327 bits (839), Expect = 1.520e-103
Identity = 165/293 (56.31%), Postives = 223/293 (76.11%), Query Frame = 0
Query:  211 KPKTEFERVMDDAKALRRPRAKEVDGLAVTDDCLAFMEKMMKARDDDMRAYRSNKPALGKLKMLREVELMIMKTSHREIFLDNMLLTVIKKWLDPMPDGTLPNLAIRQSLLQILTDMPVDNDWIERLESSQGLGKVIHFLATKDTNAPNRRMAEKLMMKWSRVVYQNNANFHDLLEEYARPDNGNRIPTEGVAAERRNALNQLRTFKSSRQKLESIKPFPGKERAQVLAAVPRPSPMLYTTLAESEA-VNHKAVRGGRVAKAMNRKVSKTIMDLRRNNKRGSARASRPSINGR 502
            K     ER ++D KALRRPR KE+D   +  +C+AF+E MM ARD D++AYRS KPAL KLKMLR+VELM MK SHREI LDNMLL ++K WLDPMPDG LPN+ IR ++LQIL D+PVD+DW+ERL SSQGLGK+IHFL+ KD    NRR+A+KLM +W+R VYQ+N N+HDLL+E+ RP+ G R P + VAAER+ A+  ++ F+++++KL++ K    +++  VLA +PR +P L+T LAES A ++ K +R  R AK+ N+KV++T+  LRR NK  SARA++PS+NGR
Sbjct:  192 KSLNAIERAIEDNKALRRPRRKELDPKKIESECIAFLESMMGARDADIKAYRSGKPALNKLKMLRDVELMAMKVSHREILLDNMLLAIVKAWLDPMPDGALPNVEIRSTMLQILLDIPVDSDWVERLHSSQGLGKLIHFLSMKDDIPSNRRLADKLMKRWARPVYQSNNNYHDLLDEFDRPEEGRRAPKDSVAAERKAAMETVKHFQTAQEKLQAFKHKTNEDK--VLATIPRRTPFLFTALAESSASIDEKTLREMRNAKSRNKKVNRTMSTLRRANKNKSARAAKPSVNGR 482          
BLAST of Gchil5788.t1 vs. uniprot
Match: A0A6T6C574_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6C574_9RHOD)

HSP 1 Score: 163 bits (412), Expect = 1.110e-42
Identity = 78/164 (47.56%), Postives = 114/164 (69.51%), Query Frame = 0
Query:  216 FERVMDDAKALRRPRAKEVDGLAVTDDCLAFMEKMMKARDDDMRAYRSNKPALGKLKMLREVELMIMKTSHREIFLDNMLLTVIKKWLDPMPDGTLPNLAIRQSLLQILTDMPVDNDWIERLESSQGLGKVIHFLATKDTNAPNRRMAEKLMMKWSRVVYQNNA 379
            F+R M+++K  R+ R  + D   V ++ L F+  MM+ RDDD++AYR N PAL K+K L  VE M+ K  +RE  L N LL VI+ WLDPMPD TLPNL +R  LL++L++ PV+ +W+  LE S+GLGKV+++L+ KD + PN R+A+ L+ KWSR +++  A
Sbjct:   35 FDRKMEESKNRRKXRRPK-DRAVVEEEVLDFIAFMMRVRDDDLKAYRKNTPALNKVKSLPHVEEMLKKIDYRETLLQNDLLPVIRSWLDPMPDNTLPNLTVRSRLLELLSEFPVNEEWLHHLERSRGLGKVVNYLSMKDPHEPNSRLAKALVEKWSRPIFEQTA 197          
BLAST of Gchil5788.t1 vs. uniprot
Match: A0A7S1ERP1_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ERP1_9RHOD)

HSP 1 Score: 150 bits (380), Expect = 1.900e-36
Identity = 77/173 (44.51%), Postives = 113/173 (65.32%), Query Frame = 0
Query:  216 FERVMDDAKALRRPRAKEVDGLAVTDDCLAFMEKMMKARDDDMRAYRSNKPALGKLKMLREVELMIMKTSHREIFLDNMLLTVIKKWLDPMPDGTLPNLAIRQSLLQILTDMPVDNDWIERLESSQGLGKVIHFLATKDTNAPNRRMAEKLMMKWSRVVYQ-NNANFHDLLEE 387
            F++ +   K L++ R +EVD   V  + + F+ KMM ARD D+ AY+  KPAL KL++L E+E M+ K  +R+  L N +L VIK W+DP+PDG LPN  +R  +L +L   PVD DW + L  S GLGKV+++ A KD  APN R+A KL+ KWSR +++ +N N+ +  E+
Sbjct:  204 FDQQLSAHKNLKK-RRREVDDAVVDKETVDFVAKMMTARDQDLIAYKKGKPALNKLRLLTELESMVKKVPYRKALLINGVLNVIKAWMDPLPDGQLPNQTLRVRMLGVLEVFPVDGDWPKHLSDSDGLGKVVNYYALKDPFAPNGRLARKLVEKWSRQLFEPSNKNYSEAEED 375          
BLAST of Gchil5788.t1 vs. uniprot
Match: A0A1X6P543_PORUM (TFIIS N-terminal domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P543_PORUM)

HSP 1 Score: 147 bits (371), Expect = 2.830e-35
Identity = 75/164 (45.73%), Postives = 103/164 (62.80%), Query Frame = 0
Query:  227 RRPRAKEVDGLAVTDDCLAFMEKMMKARDDDMRAYRSNKPALGKLKMLREVELMIMKTSHREIFLDNMLLTVIKKWLDPMPDGTLPNLAIRQSLLQILTDMPVDNDWIERLESSQGLGKVIHFLATKDTNAPNRRMAEKLMMKWSRVVYQNNANFHDLLEEYAR 390
            +R +   +D  A  +  + F+  MM ARD+D +A++  KPAL KL  L  VE M+ K  +R   L+N LL+V+K WLDPMPDG+LPNL +RQ LL  L   PVD+ W + L +S GLGK+IHFLA  D    N+R+A KLM KWSR ++    ++  L  +Y R
Sbjct:  173 KRGKNGALDEDAAAESAVKFLVTMMDARDEDAKAFKRGKPALSKLCYLPNVERMLCKVDYRAPLLNNGLLSVMKAWLDPMPDGSLPNLRVRQVLLAALDAFPVDDGWTDLLRASNGLGKIIHFLARHDDFEANKRLARKLMDKWSRPIFDMTTDYSHLNADYER 336          
BLAST of Gchil5788.t1 vs. uniprot
Match: M2VTC6_GALSU (TFIIS N-terminal domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VTC6_GALSU)

HSP 1 Score: 137 bits (344), Expect = 5.160e-32
Identity = 67/179 (37.43%), Postives = 111/179 (62.01%), Query Frame = 0
Query:  224 KALRRPRAKEVDGLAVTDDCLAFMEKMMKARDDDMRAYRSNKPALGKLKMLREVELMIMKTSHREIFLDNMLLTVIKKWLDPMPDGTLPNLAIRQSLLQILTDMPVDNDWIERLESSQGLGKVIHFLATKDTNAPNRRMAEKLMMKWSRVVYQNNANFHDLLEEYARPDNGNRIPTEGV 402
            K+  +   K +  L  T++   F+ +MMKA DDD+ A ++ KPA  KLK++ EVE  + +  +RE+FL+  LL+V+K+WLDP+PDG+LPN ++R  LL++L + PVDN W+E L SS  +G+ + +++  D     RR+A+ L+ KW R V+    ++ D   ++ R      +P E +
Sbjct:  152 KSKNKKEEKNIKDL--TEEVDNFLRRMMKAADDDLLALKAGKPATNKLKLVEEVEKNLRRVEYRELFLEQGLLSVVKRWLDPLPDGSLPNASLRSRLLKMLDEFPVDNSWMELLRSSD-IGRAVKYISVNDRMESTRRLAKDLVEKWIRPVFNAKTDYRDFQTQFRR------VPVEEI 321          
BLAST of Gchil5788.t1 vs. uniprot
Match: A0A061QZ35_9CHLO (Transcription factor SPN1 (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QZ35_9CHLO)

HSP 1 Score: 128 bits (321), Expect = 9.320e-29
Identity = 92/296 (31.08%), Postives = 156/296 (52.70%), Query Frame = 0
Query:  216 FERVMDDAKALRRPRAKEVDGLAVTDDCLAFMEKMMKARDDDMRAYRSNKPALGKLKMLREVELMIMKTSHREIFLDNMLLTVIKKWLDPMPDGTLPNLAIRQSLLQILTDMPVDNDWIERLESSQ--GLGKVIHFLATKDTNAP-NRRMAEKLMMKWSRVVYQNNANFHDLLEEYARPDNGNRIPTEGVAAERRNALNQLRTFKSSRQKLESIKPFPGKERAQVLAAVPRPSPMLYTTLAE----SEAVNHKAVRGGRVAKAMNRKVSKTIMDLRRNNKR--GSARASRPSINGR 502
            FE +   AKA R+ R  + D  A+T +   F+ +M  A++ D+RA +  KPA+ KLK+++E+   + +   +  FL+  +LTV+  WL P+PDG+LPN+ IR ++L+ L  MP+  +  ER +  +  GLG+V+ FL   D   P NRR+A++L+ +WSR ++         LE   +P +  R+      A+ R A             +    P PG+   +  A++P+ S + Y    E     E++ HK       AKA + K+ K +  +++ NK+  G+ R ++ SI GR
Sbjct:  139 FEFLQKKAKAARKRRRPDEDEAALTREVELFLSRMEVAQESDVRANQDRKPAIHKLKLVKEMSNKLSQAHLQRKFLEQGVLTVLTHWLSPLPDGSLPNITIRTAILKALQQMPIHVEDPERKDQLKRSGLGRVVMFLYKLDEETPQNRRLAKELVHRWSRPLFA--------LESKHQPSSEQRVQRNPDEAQPRRAQAPSEEVDEDGNPVAKKGPAPGEPGWRWHASIPQASKLDYKVRPEPKFSKESMGHK-----NTAKAKHEKLDKKLKTMKQGNKQRLGTDRPTKISIEGR 421          
BLAST of Gchil5788.t1 vs. uniprot
Match: A4RSG5_OSTLU (TFIIS N-terminal domain-containing protein (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RSG5_OSTLU)

HSP 1 Score: 117 bits (293), Expect = 4.070e-26
Identity = 68/164 (41.46%), Postives = 102/164 (62.20%), Query Frame = 0
Query:  224 KALRRPRAKEVDGLAVTDDCLAFMEKMMKARDDDMRAYRSNKPALGKLKMLREVELMIMKTSHREIFLDNMLLTVIKKWLDPMPDGTLPNLAIRQSLLQILTDMPVDNDWIERLESSQ--GLGKVIHFLATKDTNAP-NRRMAEKLMMKWSRVVYQNNANFHDL 384
            K  RR ++ E   + V D    F+ KM  A ++D RAY + KPA+ KLK+L EVE  +      E FL + LL+V++ WLD +PDG LPNL IR SL++++  +PV  D  ER +  +  GLG+ I FL+T +   P NR + +KL+ KWSR VY+ ++++ D+
Sbjct:   16 KGKRRKKSDETARMEVLD----FLSKMEIAVEEDARAYAAGKPAVKKLKLLPEVERKLKMVELHEAFLRHGLLSVLRAWLDLLPDGNLPNLTIRTSLIKLIEQLPVSTDSHERKDELKRSGLGRNILFLSTLEEETPKNRTVCKKLVEKWSRPVYELSSHYGDI 175          
BLAST of Gchil5788.t1 vs. uniprot
Match: A0A176VEA1_MARPO (TFIIS N-terminal domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VEA1_MARPO)

HSP 1 Score: 118 bits (295), Expect = 6.700e-25
Identity = 86/266 (32.33%), Postives = 140/266 (52.63%), Query Frame = 0
Query:  246 FMEKMMKARDDDMRAYRSNKPALGKLKMLREVELMIMKTSHREIFLDNMLLTVIKKWLDPMPDGTLPNLAIRQSLLQILTDMPVDNDWIERLES--SQGLGKVIHFLATKDTNAP-NRRMAEKLMMKWSRVVYQNNANFHDLLEEYARPDNGNRIPTEGVAAERRNALNQLRTFKSSRQKLESIKPFPGKERAQVLAAVPRPSPMLYTTL------AESEAVNHKAVRGGRVAKAMNRKVSKTIMDLRRNNKRGSARASRPSINGR 502
            FM K+  A + D    R++KPA+ KLKML E+  ++ K   ++ FLD  +L+ +K WL+P+PDG+LPN+ IR +LL++LTD+P+D + +ER E     GLGKV+ FL+      P N+++A  L+ KWSR ++Q +  + DL ++Y       R P +         ++  R       + +S +  PG    +  A+ P+  P+ +         AE      K +R       MN+K     + L R  KR + +A+R S+ GR
Sbjct:  236 FMAKLDVAAEADADLNRASKPAIEKLKMLPELLTVLEKRQLQQEFLDRGVLSSLKNWLEPLPDGSLPNMNIRSALLKLLTDLPIDVEVVERREQLKKSGLGKVVMFLSRLSEETPGNKKLARDLVDKWSRPIFQKSTRYEDL-KQYDDEKPPPRRPQQPAKKPVAKPMDDSRGGDELDMENDSGELKPGDPGYRYHASRPQAMPLDFVVRPASRVDAEDVRARAKQLRMDERRAKMNKK-----LQLLRTPKRKNLQAARLSVEGR 495          
BLAST of Gchil5788.t1 vs. uniprot
Match: A0A7R9XNY3_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A0A7R9XNY3_9CHLO)

HSP 1 Score: 117 bits (293), Expect = 7.440e-25
Identity = 68/164 (41.46%), Postives = 102/164 (62.20%), Query Frame = 0
Query:  224 KALRRPRAKEVDGLAVTDDCLAFMEKMMKARDDDMRAYRSNKPALGKLKMLREVELMIMKTSHREIFLDNMLLTVIKKWLDPMPDGTLPNLAIRQSLLQILTDMPVDNDWIERLESSQ--GLGKVIHFLATKDTNAP-NRRMAEKLMMKWSRVVYQNNANFHDL 384
            K  RR ++ E   + V D    F+ KM  A ++D RAY + KPA+ KLK+L EVE  +      E FL + LL+V++ WLD +PDG LPNL IR SL++++  +PV  D  ER +  +  GLG+ I FL+T +   P NR + +KL+ KWSR VY+ ++++ D+
Sbjct:  174 KGKRRKKSDETARMEVLD----FLSKMEIAVEEDARAYAAGKPAVKKLKLLPEVERKLKMVELHEAFLRHGLLSVLRAWLDLLPDGNLPNLTIRTSLIKLIEQLPVSTDSHERKDELKRSGLGRNILFLSTLEEETPKNRTVCKKLVEKWSRPVYELSSHYGDI 333          
The following BLAST results are available for this feature:
BLAST of Gchil5788.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHZ0_9FLOR6.580e-15376.87Protein IWS1-like n=1 Tax=Gracilariopsis chorda Ta... [more]
R7QJS3_CHOCR1.520e-10356.31TFIIS N-terminal domain-containing protein n=1 Tax... [more]
A0A6T6C574_9RHOD1.110e-4247.56Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S1ERP1_9RHOD1.900e-3644.51Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A1X6P543_PORUM2.830e-3545.73TFIIS N-terminal domain-containing protein n=1 Tax... [more]
M2VTC6_GALSU5.160e-3237.43TFIIS N-terminal domain-containing protein n=1 Tax... [more]
A0A061QZ35_9CHLO9.320e-2931.08Transcription factor SPN1 (Fragment) n=1 Tax=Tetra... [more]
A4RSG5_OSTLU4.070e-2641.46TFIIS N-terminal domain-containing protein (Fragme... [more]
A0A176VEA1_MARPO6.700e-2532.33TFIIS N-terminal domain-containing protein n=2 Tax... [more]
A0A7R9XNY3_9CHLO7.440e-2541.46Hypothetical protein n=1 Tax=Ostreococcus sp. 'luc... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035441TFIIS/LEDGF domain superfamilyGENE3D1.20.930.10Conserved domain common to transcription factors TFIIS, elongin A, CRSP70coord: 235..380
e-value: 1.8E-38
score: 133.5
IPR017923Transcription factor IIS, N-terminalPFAMPF08711Med26coord: 324..374
e-value: 2.1E-5
score: 24.5
IPR017923Transcription factor IIS, N-terminalPROSITEPS51319TFIIS_Ncoord: 297..377
score: 15.66531
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 482..504
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..224
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..156
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..224
NoneNo IPR availablePANTHERPTHR46010PROTEIN IWS1 HOMOLOGcoord: 42..503

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004449_piloncontigtig00004449_pilon:160755..162269 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5788.t1Gchil5788.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004449_pilon 160755..162269 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5788.t1 ID=Gchil5788.t1|Name=Gchil5788.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=505bp
MSNVIEDVFGSDWGSDIELRNEISDAIKQSDGKEAKTAGKPAAKAAAQKK
KASPSRAHSDSEPDIQPSKGAEAVGSDSDHRPTSSRRRSSSKRDESPIPS
RRSSGKNPDEEEHNSDARSDEVASSDEDREAERRRRREKKRRISRESSRK
AKRAKKEKRAAPELEGDSEQDQEQHEDEVQARPGRKRKRAQSKREEEEQG
QEPEPEPKPEKPKTEFERVMDDAKALRRPRAKEVDGLAVTDDCLAFMEKM
MKARDDDMRAYRSNKPALGKLKMLREVELMIMKTSHREIFLDNMLLTVIK
KWLDPMPDGTLPNLAIRQSLLQILTDMPVDNDWIERLESSQGLGKVIHFL
ATKDTNAPNRRMAEKLMMKWSRVVYQNNANFHDLLEEYARPDNGNRIPTE
GVAAERRNALNQLRTFKSSRQKLESIKPFPGKERAQVLAAVPRPSPMLYT
TLAESEAVNHKAVRGGRVAKAMNRKVSKTIMDLRRNNKRGSARASRPSIN
GRDR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035441TFIIS/LEDGF_dom_sf
IPR017923TFIIS_N