Gchil5787.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil5787.t1
Unique Name	Gchil5787.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	240

Homology

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BLAST of Gchil5787.t1 vs. uniprot
Match: A0A2V3IF90_9FLOR (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF90_9FLOR)

HSP 1 Score: 231 bits (589), Expect = 3.700e-70
Identity = 132/261 (50.57%), Postives = 163/261 (62.45%), Query Frame = 0

Query:    1 MAQKRRWEQLQRTVRDKDDEIQRLKNLLQQLTNTQLHAXXXXXXXXXXXQHVPSVADACDSSCDTRVAAPTPHALSRSLADHLARAELDLFVRLMWSPPR-DGDANAMAVAA--------------LPPVAANLGCLHRVVVANVDGSVLGVRHRNDERGRAMGADVGAKIWEYVHSADVLHLKCSVVHASKLADMFDGHLNVFSYRRRR-----LTEPPQCGVDDH--TAPFVRMKGCVYPVKDSAGVISRVLLAEFIEL 239
            MAQK+RWEQLQ TV  KD EI RLK +LQ++TNTQ               ++       D S                  D L+RAEL+LFV+L+W+PP   G +++   ++              LPP+AANLGCLHRV+VA VDGSVLG+RH+ND+RGRAMGA+VG  IWE+V SAD LHL+CS+VHASKLA MFDGHLNVFSYRRR+            G  D      ++RMKGCVYP+ D +G I+RVLLAEFIEL
Sbjct:  227 MAQKKRWEQLQNTVTRKDAEIARLKRMLQEVTNTQEQTTRQSGGRFNSVANIGEAQRGADCS----------------RGDALSRAELELFVKLLWAPPHHSGQSDSQHSSSVNGADGSCGGSQQLLPPMAANLGCLHRVIVAKVDGSVLGIRHQNDQRGRAMGAEVGGCIWEHVDSADSLHLRCSIVHASKLAAMFDGHLNVFSYRRRKHVTYATNNDSALGGGDGGGRVEYIRMKGCVYPLPDDSGAITRVLLAEFIEL 471

[Close]

BLAST of Gchil5787.t1 vs. uniprot
Match: R7QI18_CHOCR (BZIP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI18_CHOCR)

HSP 1 Score: 180 bits (456), Expect = 2.740e-50
Identity = 105/244 (43.03%), Postives = 142/244 (58.20%), Query Frame = 0

Query:    1 MAQKRRWEQLQRTVRDKDDEIQRLKNLLQQLTNTQLHAXXXXXXXXXXXQHVPSVADACDSSCDTRVAAPTPHAL-SRSLADHLARAELDLFVRLMWSP--PRDGDANAMAVAALPPVAANLGCLHRVVVANVDGSVLGVRHRNDERGRAMGADVGAKIWEYVHSADVLHLKCSVVHASKLADMFDGHLNVFSYRRRR--LTEPPQCGVDDHTAPFVRMKGCVYPVKDSAGVISRVLLAEFIEL 239
            +AQK+RW++LQ TV  KD EI RLKN+LQ++TN  + A                               P   AL S   AD L  AE  +FV+LMWSP  P +        A LPP+AAN+G L+RV+VA +DG VLG RH +   G AMG  VG+ +WE+VHS+DV HL+ +VVHA+++A + +G  NVFSYRRR+  +       V      ++RMKGC+YP+ D  G + +VLL EFIE+
Sbjct:  271 VAQKKRWQELQETVERKDQEISRLKNMLQEVTNQNIAATSRL---------------------------PEREALGSTEKADSLTAAEAGMFVKLMWSPSTPEEERGKGEEGAILPPLAANIGSLYRVIVAKLDGYVLGNRHVDSRCGTAMGGQVGSLLWEHVHSSDVAHLRFTVVHAARMASVMNGEPNVFSYRRRQHVVKREGHAEVGMDKIKYMRMKGCLYPISDENGHVVQVLLGEFIEI 487

The following BLAST results are available for this feature:

BLAST of Gchil5787.t1 vs. uniprot

BLAST of Gchil5787.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IF90_9FLOR	3.700e-70	50.57	BZIP domain-containing protein n=1 Tax=Gracilariop...	[more]
R7QI18_CHOCR	2.740e-50	43.03	BZIP domain-containing protein n=1 Tax=Chondrus cr...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 7..34

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004449_pilon	contig	tig00004449_pilon:121788..122507 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil5787.t1	Gchil5787.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004449_pilon 121788..122507 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil5787.t1 ID=Gchil5787.t1|Name=Gchil5787.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=240bp
MAQKRRWEQLQRTVRDKDDEIQRLKNLLQQLTNTQLHAHADHRHQHQHQQ
HVPSVADACDSSCDTRVAAPTPHALSRSLADHLARAELDLFVRLMWSPPR
DGDANAMAVAALPPVAANLGCLHRVVVANVDGSVLGVRHRNDERGRAMGA
DVGAKIWEYVHSADVLHLKCSVVHASKLADMFDGHLNVFSYRRRRLTEPP
QCGVDDHTAPFVRMKGCVYPVKDSAGVISRVLLAEFIEL*