Gchil5786.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5786.t1
Unique NameGchil5786.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length672
Homology
BLAST of Gchil5786.t1 vs. uniprot
Match: A0A2V3IFA7_9FLOR (Epithelial splicing regulatory protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFA7_9FLOR)

HSP 1 Score: 478 bits (1231), Expect = 8.810e-158
Identity = 232/341 (68.04%), Postives = 273/341 (80.06%), Query Frame = 0
Query:    4 ASVAAPP--PHFLVIVDMETTCDDASDPRRPEVVELPWLVYHVPTRTVVDTKQLFVAPRWNVNPNPPPDAVRALGTDVAFAPSLRHALMHFDTYLYRSFVLSAKSFVLATDGHWDIAHVLLPDAAQKALTLAPHFRSFVDLRADFSRCYPMAPTAVDRKTIFSYLHISTAPRASGLDECAALGALVTRLLADGHAFDRRVVLSDYEWATLPASVXXXXXXXXXXXGVGAIVRLRGLPWTCSEADVAHFLGGIALVPNGIHLVTNAHGKRSGEAFVQLESADGVALALARHKHMLGRRYIEVFNSSPLDMANHLGRA---CHKRASGGKASAASRSSFGRQR 339
            A+ A PP  P FLVI+D+ETTCDD +DPR PE+VE PWLVYH+P+R+V+DTKQ+F+APRWN NPNPPPDAVR LGTDVAFAPSL  AL+ FDTY+Y SF+L+AKSFVL TDGHWDI HVLL +AA+KA+ LAPHFR+++DLRA+FSRCYP+AP   DRKT+FSYL+IST PRASG++EC AL  LVTRLL DGH FD+ + +SDYEW TLPA +            VG IVRLRGLPWTC+EADVA FL GI +V NGIH V NA GK +GEAFVQLESAD V LAL RHK M+GRRYIEVF SSP+DMANHLGRA    H  AS  + S++S  SFG++R
Sbjct:    2 AAAARPPIQPDFLVILDIETTCDDLNDPRHPEIVEFPWLVYHIPSRSVLDTKQIFIAPRWNANPNPPPDAVRGLGTDVAFAPSLAEALLQFDTYIYHSFMLTAKSFVLVTDGHWDITHVLLTEAARKAVALAPHFRTYLDLRAEFSRCYPVAPAPADRKTMFSYLNISTQPRASGVEECLALSNLVTRLLTDGHVFDQPLFISDYEWTTLPAHIPAVATPVATAVAVGGIVRLRGLPWTCTEADVADFLAGIPVVHNGIHFVRNAQGKATGEAFVQLESADAVTLALGRHKQMVGRRYIEVFKSSPVDMANHLGRAEARRHMHASNKRKSSSS--SFGQRR 340          
BLAST of Gchil5786.t1 vs. uniprot
Match: R7QIY1_CHOCR (RRM domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIY1_CHOCR)

HSP 1 Score: 405 bits (1042), Expect = 2.770e-127
Identity = 193/323 (59.75%), Postives = 241/323 (74.61%), Query Frame = 0
Query:    3 GASVAAPPPH----FLVIVDMETTCDDASDPRRPEVVELPWLVYHVPTRTVVDTKQLFVAPRWNVNPNPPPDAVRALGTDVAFAPSLRHALMHFDTYLYRSFVLSAKSFVLATDGHWDIAHVLLPDAAQKALTLAPHFRSFVDLRADFSRCYPMAPTAVDRKTIFSYLHISTAPRASGLDECAALGALVTRLLADGHAFDRRVVLSDYEWATLPASVXXXXXXXXXXXGVGAIVRLRGLPWTCSEADVAHFLGGIALVPNGIHLVTNAHGKRSGEAFVQLESADGVALALARHKHMLGRRYIEVFNSSPLDMANHLGRACHKR 321
             AS A PP H    +LV++D+E  CDD +D    E+VELPWLV+ + T T  D KQ+F+AP WN NPNPPPDAVR LGTDV FA SL  A++HFDTY+Y+SFV++ KSF L TDG WD+  +L  +AA+KA+ LAP+FR++++LRADF RC+P AP   DRKT+FSYL+IST PRASGL+ECAAL ++V  LL  GH F +   +SDYEW+T+P  +            VG I+RLRGLPWTC E D+  FL GIA+VP GIH V NAHGK +GEAFVQL+SA GV+LAL+RHK M+GRRYIEVF SSP+DM+NHLGRA  +R
Sbjct:   72 AASAAPPPLHSGLDYLVVLDLEAICDDPADSYHHEIVELPWLVFDLATNTPRDHKQIFIAPLWNANPNPPPDAVRGLGTDVVFADSLADAILHFDTYIYQSFVVAGKSFYLLTDGPWDLKDLLFVEAARKAVILAPYFRTYINLRADFQRCFPAAPPPTDRKTMFSYLNISTEPRASGLEECAALASVVQCLLQAGHVFSQPEFVSDYEWSTIPNRIPAVATPLASAVPVGGIIRLRGLPWTCIEQDIVEFLHGIAIVPAGIHFVRNAHGKATGEAFVQLDSAKGVSLALSRHKEMMGRRYIEVFKSSPVDMSNHLGRADARR 394          
BLAST of Gchil5786.t1 vs. uniprot
Match: A0A6T6CQ36_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6CQ36_9RHOD)

HSP 1 Score: 216 bits (551), Expect = 3.890e-60
Identity = 107/265 (40.38%), Postives = 161/265 (60.75%), Query Frame = 0
Query:   76 GTDVAFAPSLRHALMHFDTYLYRSFVLSAKSFVLATDGHWDIAHVLLPDAAQKALTLAPHFRSFVDLRADFSRCYPMAPTAVDRKTIFSYLHI----------STAPRASGLDECAALGALVTRLLADGHAFDRRVVLSDYEWATLPASVXXXXXXXXXXXGVGAIVRLRGLPWTCSEADVAHFLGGIALVPNGIHLVTNAHGKRSGEAFVQLESADGVALALARHKHMLGRRYIEVFNSSPLDMANHLGRACHKRASGGKASAA 330
            G D+ ++PSL  A+  FD YL+ +FV   ++F L  DG WD+  +L+ +A +K++ L  HFR+F DLRA+F +CY +     DR+T+    ++              R  GLD+CA LG ++ R+L +GH F   VV+ + EW+ + A              VG IVRLRGLPW+C+E D+  FL  + ++P GI+ V N+  K +GEAF Q+  A+ + LA+ RH+H +G RY+EVF SSP +MA+ LG+A  +RA+GG +S A
Sbjct:   14 GGDLLYSPSLVEAIRQFDEYLFEAFVKQNRNFCLLCDGPWDVQQLLVGEATKKSIALNDHFRTFYDLRAEFQKCYELDAPPGDRRTMLEICNLLGEEGVLARLEGTIRGPGLDDCALLGQIIQRMLNEGHVFGEPVVIPEPEWSAVCARSVTPGVSSMV---VGGIVRLRGLPWSCTEEDILTFLEDVKVIPGGINFVLNSQKKSTGEAFAQVADAESMELAVLRHRHSMGHRYVEVFRSSPQEMASALGKADMRRANGGPSSFA 275          
BLAST of Gchil5786.t1 vs. uniprot
Match: A0A7S3EEH1_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EEH1_9RHOD)

HSP 1 Score: 162 bits (410), Expect = 9.570e-40
Identity = 95/306 (31.05%), Postives = 145/306 (47.39%), Query Frame = 0
Query:   12 HFLVIVDMETTCDDASDPRRPEVVELPWLVYHVPTRTVVDTKQLFVAPRWNVNPNPPPDAVRALGTDVAFAPSLRHALMHFDTYLYRSFVLSAKSFVLATDGHWDIAHVLLPDAAQKALTLAPHFRSFVDLRADFSRCYPMAPTAVDRKTIFSYLHISTAPRASGLDECAALGALVTRLLADGHAFDRRVVLSDYEWATLPASVXXXXXXXXXXXGVGAIVRLRGLPWTCSEADVAHFLGGIALVPNGIHLVTNAHGKRSGEAFVQLESADGVALALARHKHMLGRRYIEVFNSSPLDMANHLGRA 317
              LVIVD+    D   +    ++V+  W  Y++  R +V+ + + +   W            A   +       + A+  F+  LY  FV   KSF + TD  W + HV + +A +K + LA H+  F DL+++F +  P      DR  +    H ++      +DE A +   VT LL   H F     +   +WA     +            VG IVRLRGLPW  +E DVA+F   + LVPN +H+      K +G AFVQ  + +   +A++ H+ M+ +RYIEVF SSP DMA  + RA
Sbjct:   28 ELLVIVDLTVGSDPKREHEFQQIVQWDWAAYNILERKIVERRSVTMEREWE-----------AADAEDDGRVQFQQAVNQFNQALYEMFVQKDKSFCMLTDNSWTLQHVFVMEAMRKNVQLASHYHVFFDLKSEFKKYEPNTYWPRDRHAMLE--HFNSPDVHEPMDEIAQI---VTLLLEHNHCFVYPETVQGVDWARETLGMPAHAAPIAAAIPVGGIVRLRGLPWAANEEDVANFFKDVELVPNAVHMTHTKQNKPTGLAFVQTATLEDAEIAVSFHRKMMDKRYIEVFKSSPQDMAAAMERA 317          
BLAST of Gchil5786.t1 vs. uniprot
Match: A0A1X6NV02_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NV02_PORUM)

HSP 1 Score: 154 bits (389), Expect = 1.320e-35
Identity = 97/231 (41.99%), Postives = 125/231 (54.11%), Query Frame = 0
Query:  106 SFVLATDGHWDIAHVLLPDAAQKALTLAPHFRSFVDLRADFSRCYPMAPTAVDRKTIFSYLHISTAPRASGLD-----------ECAALGALVTRLLADGHAFDRRVVLSDYEWATLPASVXXXXXXXXXXXGVGA--IVRLRGLPWTCSEADVAHFLGGIALVPNGIHLVTNAHGKRSGEAFVQLESADGVALALARHKHMLGRRYIEVFNSSPLDMANHLGRACHKRAS 323
            +++LATDG WD++ VL  +AA K L L P   +F DLR +FSR  P A    +R  + + LH+   P A  +               AL  +V RLLA GHAF     +S  +   L A V           GV A  IVRLRGLPW+ +EADV +F   +   P G+  V NA GK +GEAF+Q+     +  AL RH+HM+G RY+EVF SSP DMA HL R C  R S
Sbjct:  292 TYILATDGPWDLSVVLAREAAAKHLNLPPTLTTFFDLRTEFSRALPHAGRPHNRAALLAALHLPPPPSAGPIXXXXXXXXXSVAHVRALAGVVARLLASGHAF-----VSPVQPPPLFAPVVTA--------GVPAADIVRLRGLPWSATEADVLNFFSSVPATPGGVRFVRNAAGKATGEAFLQVPLGS-MDRALRRHRHMMGPRYVEVFASSPADMAAHLAR-CDGRGS 507          
BLAST of Gchil5786.t1 vs. uniprot
Match: UPI0014257E2E (LOW QUALITY PROTEIN: epithelial splicing regulatory protein 1-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014257E2E)

HSP 1 Score: 145 bits (367), Expect = 7.940e-33
Identity = 90/281 (32.03%), Postives = 135/281 (48.04%), Query Frame = 0
Query:   33 EVVELPWLVYHVPTRTVVDTKQLFVAPRWNVNPNPPPDAVRALGTDVAF---APSLRHALMHFDTYLYRSFVLS-AKSFVLATDGHWDIAHVLLPDAAQKALTLAPHFRSFVDLRADFSRCYPMAPTAVDRKTIFSYLHISTAP---RASGLDECAALGALVTRLLADGHAF-DRRVVLSDYEWATLPASVXXXXXXXXXXXGVGAIVRLRGLPWTCSEADVAHFLGGIALVPNGIHLVTNAHGKRSGEAFVQLESADGVALALARHKHMLGRRYIEVFNS 305
            E++   W+V  V T  ++  ++ +V P    +   P +  + LG  V     A  L   L  FD +L     +    +  L TDG   +   L P A+ K L L P+F  F DLR +F + YP A    + K +  +++I T        G DEC  +G ++ + +ADGH F +  +V   YE  T                 V   V+ RGLPW  S+ DV  F  G+ +   GI L  N HG+R+GE  V+ E+++   LAL RH+H LG+RY+EVF +
Sbjct:   29 EIILFVWVVVDVETNKIIAFQKAYVGPE---SGEAPEELCKNLGVGVDMVKGAARLNVVLQQFDQFLRTELNIDEGATLCLVTDGQLHLRQCLHPQASNKDLQLQPYFSRFFDLRKEFRKIYPQAGMISNVKDMADHMNIDTGKLNFMELGADECQLMGTIIQKFIADGHTFIEPEIVQERYEPGTXXIDKGLSLEYHVPDDQV---VKARGLPWQASDRDVFKFFKGLNVAKGGIALCLNLHGRRNGEVMVRFENSEQKDLALQRHRHNLGKRYVEVFRA 303          
BLAST of Gchil5786.t1 vs. uniprot
Match: A0A7M7RE29_STRPU (RRM domain-containing protein n=3 Tax=Echinacea TaxID=7674 RepID=A0A7M7RE29_STRPU)

HSP 1 Score: 142 bits (358), Expect = 1.080e-31
Identity = 89/279 (31.90%), Postives = 134/279 (48.03%), Query Frame = 0
Query:   33 EVVELPWLVYHVPTRTVVDTKQLFVAPRWNVNPNPPPDAVRALGTDVAFAPSLRHALMHFDTYLYRSFV-LSAKSFVLATDGHWDIAHVLLPDAAQKALTLAPHFRSFVDLRADFSRCYPMAPTAVDRKTIFSYLHISTAP---RASGLDECAALGALVTRLLADGHAFDRR-VVLSDYEWATLPASVXXXXXXXXXXXGVGAIVRLRGLPWTCSEADVAHFLGGIALVPNGIHLVTNAHGKRSGEAFVQLESADGVALALARHKHMLGRRYIEVFNSS 306
            ++V L  +V  V T  VV   Q ++ P  +   +   + +      +  A +L   L   D YL    V    K+F L TDG   +   + P    K + +  +F +F DLR +F R YP AP   D K + +YL I         +GLDEC  + ++VT++++D H F +   V   YE  T   +                 V+ RGLPW  S+ DV  F  G+ +   G+ L  N HG+R+GE  V  ES++   +AL RHKH LG+RY+EVF ++
Sbjct:   27 DLVLLVSVVVDVETNKVVKFNQNYIRPENSELSDELCNTLSIRPDVITGAANLSRVLAELDNYLTTELVGEDGKTFCLLTDGQLHVRQCIHPQTTNKGIPIPEYFYNFFDLRKEFRRKYPNAPHITDVKDMATYLKIDVGNFNYTETGLDECRTMASIVTKMISDNHLFMKPDYVTKKYEPGTYDKTDSIPDD---------TAVKARGLPWQASDRDVFRFFKGLNIARGGVALCLNTHGRRNGEVMVHFESSEQRDMALQRHKHNLGKRYVEVFKAT 296          
BLAST of Gchil5786.t1 vs. uniprot
Match: A0A8B7XN21_ACAPL (epithelial splicing regulatory protein 1-like isoform X1 n=5 Tax=Valvatida TaxID=41166 RepID=A0A8B7XN21_ACAPL)

HSP 1 Score: 140 bits (353), Expect = 3.900e-31
Identity = 102/306 (33.33%), Postives = 141/306 (46.08%), Query Frame = 0
Query:   12 HFLVIVDMETTCDDAS--DPRRPEVVELPWLVYHVPTRTVVD-TKQLFVAPRWNVNPNPPPDAVRALGTDVAF---APSLRHALMHFDTYLYRSFVLS-AKSFVLATDGHWDIAHVLLPDAAQKALTLAPHFRSFVDLRADFSRCYPMAPTAVDRKTIFSYLHISTAP---RASGLDECAALGALVTRLLADGHAFDRR-VVLSDYEWATLPASVXXXXXXXXXXXGVGAIVRLRGLPWTCSEADVAHFLGGIALVPNGIHLVTNAHGKRSGEAFVQLESADGVALALARHKHMLGRRYIEVFNSS 306
            ++LVIV   T     +       ++V L W V  V T  +V   KQ FV P  + N     D  +ALG        A  +   L  F+ +LYR   LS   +F L TDG   I   L P A  K + L   F SF DLR +F + +  A T    K +  YL I T       +GLDEC  + ++V RL+ +GH F     +   YE  T   +                +V+ RGLPW  S+ DV  F  G+ +   G+ L  N +G+R+GE  V  ES+    +AL RH+H LG RY+EVF  +
Sbjct:    8 NYLVIVFCTTAGQRGALLGTDETDLVLLVWGVIDVETNKLVGFIKQSFVRPDSD-NVEVSEDLCKALGVQREVFKGAAKMEKVLQQFEEFLYRELNLSQGNTFCLLTDGQLHIRQCLHPQALNKNVELPDFFYSFFDLRKEFQKFHAGATTITTVKDMADYLKIDTGNYNFTETGLDECRVMASIVQRLIHEGHRFTNPDQIRRKYEPGTFDKTDTVPD---------NTVVKARGLPWQASDRDVFRFFKGLNIAKGGVALCLNHYGRRNGEVMVHFESSQHRDMALQRHRHNLGNRYVEVFKGT 303          
BLAST of Gchil5786.t1 vs. uniprot
Match: A0A433UEI1_ELYCH (RRM domain-containing protein (Fragment) n=2 Tax=Panpulmonata TaxID=977775 RepID=A0A433UEI1_ELYCH)

HSP 1 Score: 138 bits (347), Expect = 9.990e-31
Identity = 91/292 (31.16%), Postives = 140/292 (47.95%), Query Frame = 0
Query:   33 EVVELPWLVYHVPTRTVVDTKQLFVAPRWNVNPNP--PPDAVRALGTD---VAFAPSLRHALMHFDTYLYRSFVL---SAKSFVLATDGHWDIAHVLLPDAAQKALTLAPHFRSFVDLRADFSRCYPMAPTAVDRKTIFSYLHISTAPRAS-GLDECAALGALVTRLLADGHAFDRRVVLSDYEWATLPASVXXXXXXXXXXXGVGAIVRLRGLPWTCSEADVAHFLGGIALVPNGIHLVTNAHGKRSGEAFVQLESADGVALALARHKHMLGRRYIEVFNSSPLDMANHLG 315
            ++V++ +L+Y      VVD +Q FV P+ N         D     G D   V  AP L HAL  FD +L    V      +SF L TDG   +   +  +  +K ++L  +F  F DLR +F + Y         K +  YL++        G+ +C  +  ++TRL+ DGH F    ++++         +             G +VR RGLPW  S+ D+A F  G+ +   G+ L  +  G+R+GEA ++ ES +   LAL RHKH +G+RYIEV+ +S  D  N  G
Sbjct:   28 QIVQIVYLLYDQNNNKVVDVQQHFVKPQPNELAETVLTEDCKTETGLDEELVKQAPPLDHALEEFDRFLSAKGVHPDHGGRSFCLLTDGQAHLRQCVQHECCKKNISLPSYFYRFYDLRKEFKKFYK-TDVVSSIKFMTDYLNLDEDGSVEYGVRQCQEMAKILTRLVNDGHTFGDAEIINE--------RLEGGICTKNEYVSDGLVVRARGLPWQSSDQDIARFFKGLNIAKGGVALCLSPQGRRNGEALIRFESEEHRDLALKRHKHHIGQRYIEVYKASGKDFINVAG 310          
BLAST of Gchil5786.t1 vs. uniprot
Match: A0A2G8LCR3_STIJA (Putative epithelial splicing regulatory protein 2 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8LCR3_STIJA)

HSP 1 Score: 139 bits (349), Expect = 1.110e-30
Identity = 88/266 (33.08%), Postives = 130/266 (48.87%), Query Frame = 0
Query:   48 TVVDTKQLFVAPRWNVNPNPPPDAVRALGTDVAFAPSLRHALMHFDTYLYRSFVLSAK-SFVLATDGHWDIAHVLLPDAAQKALTLAPHFRSFVDLRADFSRCYPMAPTAVDRKTIFSYLHISTAP---RASGLDECAALGALVTRLLADGHAF---DRRVVLSDYEWATLPASVXXXXXXXXXXXGVGAIVRLRGLPWTCSEADVAHFLGGIALVPNGIHLVTNAHGKRSGEAFVQLESADGVALALARHKHMLGRRYIEVFNSS 306
            TV+  KQ FV P  +         ++     +  A SL   L  FD YL +    +   SF + TDG   I   L P A  K + L  +F  F D+R +F R YP AP  +D K +  +L+I         +G+DE   + ++V +LL+DGH F   DR  +   YE  T   +                +V+ RGLPW  S+ DV  F  G+ +   G+ L  N+ G+R+GE  V  E+++   +AL RHKH LG+RY+EVF ++
Sbjct:   34 TVLSFKQSFVRPVESELSEELCKTLKIQPDVITGAASLDVVLQQFDQYLRQELNANEDASFCICTDGQLHIRQCLHPQATSKGVELPDYFYQFFDIRKEFRRKYPEAPIIIDVKDMAQFLNIDVGSYDFTETGVDESRTMASIVQKLLSDGHRFMEPDR--IRGKYEPGTFEKT---------DSVSDDTVVKARGLPWQASDRDVFRFFKGLNIAKGGVALCLNSSGRRNGEVMVHFENSENRDMALQRHKHNLGKRYVEVFKAT 288          
The following BLAST results are available for this feature:
BLAST of Gchil5786.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFA7_9FLOR8.810e-15868.04Epithelial splicing regulatory protein 1 n=1 Tax=G... [more]
R7QIY1_CHOCR2.770e-12759.75RRM domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A6T6CQ36_9RHOD3.890e-6040.38Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S3EEH1_9RHOD9.570e-4031.05Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A1X6NV02_PORUM1.320e-3541.99Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
UPI0014257E2E7.940e-3332.03LOW QUALITY PROTEIN: epithelial splicing regulator... [more]
A0A7M7RE29_STRPU1.080e-3131.90RRM domain-containing protein n=3 Tax=Echinacea Ta... [more]
A0A8B7XN21_ACAPL3.900e-3133.33epithelial splicing regulatory protein 1-like isof... [more]
A0A433UEI1_ELYCH9.990e-3131.16RRM domain-containing protein (Fragment) n=2 Tax=P... [more]
A0A2G8LCR3_STIJA1.110e-3033.08Putative epithelial splicing regulatory protein 2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 231..303
e-value: 0.0025
score: 27.1
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 233..300
e-value: 7.2E-5
score: 22.5
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 3..200
e-value: 8.4E-26
score: 92.9
IPR010765Protein of unknown function DUF1350PFAMPF07082DUF1350coord: 367..602
e-value: 4.1E-22
score: 78.7
IPR010765Protein of unknown function DUF1350PANTHERPTHR34127OS04G0405600 PROTEINcoord: 363..643
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 228..317
e-value: 3.3E-25
score: 90.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 328..357
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 229..314
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 9..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004449_piloncontigtig00004449_pilon:117386..120266 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5786.t1Gchil5786.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004449_pilon 117386..120266 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5786.t1 ID=Gchil5786.t1|Name=Gchil5786.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=672bp
MTGASVAAPPPHFLVIVDMETTCDDASDPRRPEVVELPWLVYHVPTRTVV
DTKQLFVAPRWNVNPNPPPDAVRALGTDVAFAPSLRHALMHFDTYLYRSF
VLSAKSFVLATDGHWDIAHVLLPDAAQKALTLAPHFRSFVDLRADFSRCY
PMAPTAVDRKTIFSYLHISTAPRASGLDECAALGALVTRLLADGHAFDRR
VVLSDYEWATLPASVPAVATAVATAVGVGAIVRLRGLPWTCSEADVAHFL
GGIALVPNGIHLVTNAHGKRSGEAFVQLESADGVALALARHKHMLGRRYI
EVFNSSPLDMANHLGRACHKRASGGKASAASRSSFGRQRGRRAGGGGGGG
RAGGEAVVGVEQQLGDNNWVLRPPRGARPHAVVHFVGGALFAAAPHVYYA
QLLEALAARGLLVVATATPLRLDRVAAADALARDWLRVESALAADLGALP
VVGVTHSAGAVLSVLASSLFDGACPRAANVFIAFCNRDLDDAVPALPLLA
RPLSALSAPVGVAVARAQSALRSVRASALTPRVAAERLVPAAAQAALLPA
QLPALLAELDGGVLRPSAADVLHVLRSAALYDVPRTLLLSFDGDALDDGA
AAQAAISGGGGGDGGGDGDGDGDGGVVSRVVLRGSHLSPLAQSTGCDAAD
ALWLAPLSRVAALVAHFAARA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR036397RNaseH_sf
IPR010765DUF1350
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf
IPR012337RNaseH-like_sf