Gchil5778.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5778.t1
Unique NameGchil5778.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length136
Homology
BLAST of Gchil5778.t1 vs. uniprot
Match: A0A839GH09_9BACT (Uncharacterized protein n=1 Tax=Rufibacter quisquiliarum TaxID=1549639 RepID=A0A839GH09_9BACT)

HSP 1 Score: 62.8 bits (151), Expect = 6.440e-10
Identity = 39/127 (30.71%), Postives = 68/127 (53.54%), Query Frame = 0
Query:    6 KNTLAFILGLVTSSVVMSAVQSLGSRAFPVSPS-----PESPMKHVLSPPLGAYLFMEASYILGSILGGFVLAKLACSHTGELIMALGIVLTVFGVQNVITIAHPLWFAVVSLCTFLPGVHYGAKLA 127
            K+ LA + G       +  VQ LG + +P   +      ++   ++ + P GA L +  +Y LGS  GG V A+ A +      +A+G++L + G+ N++ I HPLWF++VSL  +LP   +G  ++
Sbjct:    3 KSILAVLGGAAVGVFTIGLVQYLGHQWYPTPGNLSLDDTQAVGSYLATAPTGALLLVLLAYALGSWFGGMVGARYAPAKPVVHALAVGLLLMLSGIANLLVIPHPLWFSIVSLLVYLPMAFFGGMMS 129          
BLAST of Gchil5778.t1 vs. uniprot
Match: A0A4R6XXY9_9GAMM (Uncharacterized protein n=1 Tax=Marinicella litoralis TaxID=644220 RepID=A0A4R6XXY9_9GAMM)

HSP 1 Score: 59.7 bits (143), Expect = 1.070e-8
Identity = 38/133 (28.57%), Postives = 64/133 (48.12%), Query Frame = 0
Query:    1 MQSLLKNTLAFILGLVTSSVVMSAVQSLGSRAFPVSPSPESPMKHVLSPPLGAY-----LFMEASYILGSILGGFVLAKLACSHTGELIMALGIVLTVFGVQNVITIAHPLWFAVVSLC-TFLPGVHYGAKLA 127
            M S+ +N LA I+GLV  + V   + ++G    PV    +      L   +  +     LF   ++ LG+++G FV AKLA +H     M +G+   + G+  V+ +  P+WF    L   +LP  + G  +A
Sbjct:    1 MNSMTRNVLAVIVGLVVGAAVNMGLVNIGPMVIPVPAGADVTTMEGLKESMNLFAPKNFLFPFLAHALGTLVGAFVAAKLAATHQMRCAMIIGLAFLIGGIAMVVMVGGPIWFMAADLLLAYLPMAYLGGLMA 133          
BLAST of Gchil5778.t1 vs. uniprot
Match: A0A848UXF1_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A848UXF1_9FLAO)

HSP 1 Score: 58.5 bits (140), Expect = 2.890e-8
Identity = 44/136 (32.35%), Postives = 68/136 (50.00%), Query Frame = 0
Query:    1 MQSLLKNTLAFILGLVTSSVVMSAVQSLGSRAFPV--SPSPESP------MKHVLSPPLGAYLFMEASYILGSILGGFVLAKLACSHTGELIMALGIVLTVFGVQNVITIAHPLWFAVVSLCT-FLPGVHYGAKLA 127
            M  +L+N LAFI   V  S+V   +   G+  FP+     P  P      M+H  +   G Y+F   ++ LG+++G FV++KLA  H  +L M +     + GV N I +  PLWF  + L   ++P    G K+A
Sbjct:    1 MNPILRNILAFIAAWVAGSIVNMGLIITGNSIFPLPEGTDPMDPASLAAAMEHFST---GNYIFPFLAHALGTLVGAFVVSKLAAGHQFKLAMGIAAFFLLGGVINAINLPAPLWFEALDLIVAYIPMGWLGWKMA 133          
BLAST of Gchil5778.t1 vs. uniprot
Match: A0A7X0V1Y3_9BACT (Uncharacterized protein n=1 Tax=Pontibacter sp. Tf4 TaxID=2761620 RepID=A0A7X0V1Y3_9BACT)

HSP 1 Score: 53.5 bits (127), Expect = 2.560e-6
Identity = 36/135 (26.67%), Postives = 63/135 (46.67%), Query Frame = 0
Query:    1 MQSLLKNTLAFILGLVTSSVVMSAVQSLGSRAFPVSPSPE-------SPMKHVLSPPLGAYLFMEASYILGSILGGFVLAKLACSHTGELIMALGIVLTVFGVQNVITIAHPLWFAVVSLC-TFLPGVHYGAKLA 127
            M +LL+N LA + G+V  S+V   + ++     P     +           H+  P    ++F   ++ LG+  G FV A +A SH  +  MA+G+     G+  +  +  P+W+ +V L   +LP  +   KLA
Sbjct:    1 MNTLLRNILAIVAGIVIGSIVNMGLINISGTVIPPPDGADVTTSEGLKAAMHLFEPK--HFIFPFLAHALGTFAGAFVAAIVAASHKFKFAMAIGVFFLAGGIATIFMLPSPVWYTIVDLVFAYLPMAYLAYKLA 133          
BLAST of Gchil5778.t1 vs. uniprot
Match: A0A425XYL5_9BACT (Uncharacterized protein n=1 Tax=Ancylomarina euxinus TaxID=2283627 RepID=A0A425XYL5_9BACT)

HSP 1 Score: 52.0 bits (123), Expect = 9.280e-6
Identity = 34/133 (25.56%), Postives = 68/133 (51.13%), Query Frame = 0
Query:    1 MQSLLKNTLAFILGLVTSSVVMSAVQSLGSRAFPVSPSPESPMKHVLSPPLGAY-----LFMEASYILGSILGGFVLAKLACSHTGELIMALGIVLTVFGVQNVITIAHPLWFAVVSLC-TFLPGVHYGAKLA 127
            M ++L+N LA + GL+  S+V   +  +     P+    ++     L   +  +     +F   ++  G+++G FV   LA +H  +  + +G    + G+ +V+T+  PLWF+++ L   +LP   +GA+LA
Sbjct:    1 MNTILRNILAVVAGLIVGSLVNMGLVMISGSIIPLPTGADTSTTEGLKEAMHLFEAKHFIFPFLAHACGTLVGAFVAYLLAGNHRLKFALGIGCFFFLGGLTSVLTLPSPLWFSLLDLIGAYLPMAWFGAQLA 133          
The following BLAST results are available for this feature:
BLAST of Gchil5778.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A839GH09_9BACT6.440e-1030.71Uncharacterized protein n=1 Tax=Rufibacter quisqui... [more]
A0A4R6XXY9_9GAMM1.070e-828.57Uncharacterized protein n=1 Tax=Marinicella litora... [more]
A0A848UXF1_9FLAO2.890e-832.35Uncharacterized protein n=1 Tax=Flavobacteriales b... [more]
A0A7X0V1Y3_9BACT2.560e-626.67Uncharacterized protein n=1 Tax=Pontibacter sp. Tf... [more]
A0A425XYL5_9BACT9.280e-625.56Uncharacterized protein n=1 Tax=Ancylomarina euxin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..71
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..100
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 101..105
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 125..135
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 106..124
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..50
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 72..82
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availableTMHMMTMhelixcoord: 51..73
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 86..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000015_piloncontigtig00000015_pilon:1561806..1562213 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5778.t1Gchil5778.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000015_pilon 1561806..1562213 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5778.t1 ID=Gchil5778.t1|Name=Gchil5778.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=136bp
MQSLLKNTLAFILGLVTSSVVMSAVQSLGSRAFPVSPSPESPMKHVLSPP
LGAYLFMEASYILGSILGGFVLAKLACSHTGELIMALGIVLTVFGVQNVI
TIAHPLWFAVVSLCTFLPGVHYGAKLAHTGGSEFV*
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