Gchil5765.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil5765.t1
Unique Name	Gchil5765.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	234

Homology

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BLAST of Gchil5765.t1 vs. uniprot
Match: A0A2V3IRW3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRW3_9FLOR)

HSP 1 Score: 149 bits (377), Expect = 2.330e-41
Identity = 93/241 (38.59%), Postives = 135/241 (56.02%), Query Frame = 0

Query:    1 MSPRRVNVFARADGTCLHDVVWQQPSQ--QPQPPEAHKITADNIWPIIHNFISLARDVD-GGPLRRLVFRNPSQYAPTVANFDPIVKHAEHRRAPVVVHVHSDSRFVITVTECVQHYSLF----HHSPYSSA---FTLSEFCSTLLHWLGEQHAAFVGARMTGVAQVQHGDDGSVSTDALECVECDEHELSDNWQQSGGHSADEQTAAPQHSPDDVKTLRAMIEQSRIAEMIDNTMKLVQM 231
            M  RR+NVFAR DGT LHDV+ + P+   +   P+  +++A  IWPI+HNF +L+R++D    LRRLVFR+P QYAP V+NF   V+   +   P+V+H    + FV+TVTE + +++LF    HHSP SS+   FTLS+FC T++H++ +++ AF  A         H D                              AD+           V+TLR +IEQS++ EMI NTM+LVQ+
Sbjct:    1 MPTRRINVFARVDGTVLHDVLHRTPTAPTEQSSPKPSQVSAQTIWPIVHNFFALSRELDRAASLRRLVFRDPQQYAPPVSNFHTAVRPNRNHTPPIVIHCLQRAPFVVTVTETLPNFTLFDQQHHHSPLSSSSTEFTLSDFCDTIMHFVHKEYDAFSAANRAEA----HAD---AQLXXXXXXXXXXXXXXXXXXXXXXXXADQA----------VQTLRQVIEQSKLTEMIHNTMQLVQL 224

The following BLAST results are available for this feature:

BLAST of Gchil5765.t1 vs. uniprot

BLAST of Gchil5765.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IRW3_9FLOR	2.330e-41	38.59	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..202

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000015_pilon	contig	tig00000015_pilon:1480998..1481699 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil5765.t1	Gchil5765.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000015_pilon 1480998..1481699 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil5765.t1 ID=Gchil5765.t1|Name=Gchil5765.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=234bp
MSPRRVNVFARADGTCLHDVVWQQPSQQPQPPEAHKITADNIWPIIHNFI
SLARDVDGGPLRRLVFRNPSQYAPTVANFDPIVKHAEHRRAPVVVHVHSD
SRFVITVTECVQHYSLFHHSPYSSAFTLSEFCSTLLHWLGEQHAAFVGAR
MTGVAQVQHGDDGSVSTDALECVECDEHELSDNWQQSGGHSADEQTAAPQ
HSPDDVKTLRAMIEQSRIAEMIDNTMKLVQMER*