Gchil5763.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5763.t1
Unique NameGchil5763.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length347
Homology
BLAST of Gchil5763.t1 vs. uniprot
Match: A0A2V3IRU9_9FLOR (TATA-box-binding protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRU9_9FLOR)

HSP 1 Score: 361 bits (926), Expect = 1.880e-122
Identity = 183/190 (96.32%), Postives = 188/190 (98.95%), Query Frame = 0
Query:  157 NTSGRISHGIVPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERESSRASRKYAKIVHKLGYDNAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRSDIYEAFDNIYHVLQTFRKPRN 346
            NT GR+SHGIVP+IQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERESSRASRKYAKIVHKLGYD+AKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVR+DIYEAFDNIYHVLQTFRK +N
Sbjct:   54 NTGGRLSHGIVPDIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERESSRASRKYAKIVHKLGYDDAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRADIYEAFDNIYHVLQTFRKAKN 243          
BLAST of Gchil5763.t1 vs. uniprot
Match: A0A1X6P871_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P871_PORUM)

HSP 1 Score: 301 bits (771), Expect = 9.410e-99
Identity = 153/191 (80.10%), Postives = 168/191 (87.96%), Query Frame = 0
Query:  155 PSNTSGRISHGIVPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERESSRASRKYAKIVHKLGYDNAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRSDIYEAFDNIYHVLQTFRKPR 345
            P+  +G  SHGIVP+IQNVVATTNL V L+LK IA++ARNAEYNPKRFAAV+MRIREPKTTALIFSSGKIVVTGAKSE  S  ASRKYA+I+ KLGY  A+F EF VQNIVASCDVNFPVRLEGL+H H  FCSYEPELFPGLIYRMI PKIVLLIFVSGKVVLTGAK+R +IY+AF+NIYHVL  FRKPR
Sbjct:   51 PAPAAGPGSHGIVPQIQNVVATTNLGVALELKTIAMQARNAEYNPKRFAAVVMRIREPKTTALIFSSGKIVVTGAKSEDASKLASRKYARIIQKLGYAGARFTEFKVQNIVASCDVNFPVRLEGLSHGHHMFCSYEPELFPGLIYRMINPKIVLLIFVSGKVVLTGAKLRQEIYDAFNNIYHVLLQFRKPR 241          
BLAST of Gchil5763.t1 vs. uniprot
Match: A0A7S0ZL16_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZL16_9RHOD)

HSP 1 Score: 294 bits (752), Expect = 1.950e-96
Identity = 152/189 (80.42%), Postives = 166/189 (87.83%), Query Frame = 0
Query:  156 SNTSGRISHGIVPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERESSRASRKYAKIVHKLGYDNAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRSDIYEAFDNIYHVLQTFRKP 344
            S  +G+ SHGI+P+IQNVV+TTNL V LDLK+IALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKS   +  ASRKYA+IV KLGY+ AKF EF VQNIVASCDV FPVRLE LA AHS FCSYEPELFPGLIYRM+ PK+VLLIFVSGKVVLTGAKVR +IY+AF+NIY VL  FRKP
Sbjct:   28 SGANGQGSHGILPQIQNVVSTTNLGVSLDLKEIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSIDSAKLASRKYARIVQKLGYEAAKFSEFKVQNIVASCDVTFPVRLEPLAQAHSHFCSYEPELFPGLIYRMLDPKVVLLIFVSGKVVLTGAKVRDEIYDAFNNIYPVLCLFRKP 216          
BLAST of Gchil5763.t1 vs. uniprot
Match: A0A7S0XI96_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XI96_9RHOD)

HSP 1 Score: 284 bits (726), Expect = 1.580e-92
Identity = 146/184 (79.35%), Postives = 162/184 (88.04%), Query Frame = 0
Query:  160 GRISHGIVPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERESSRASRKYAKIVHKLGYDNAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRSDIYEAFDNIYHVLQTFRK 343
            G+ ++GIVP IQNVV+TTNL V LDLK+IALRARNAEYNPKRFAAVIMRIR+PKTTALIFSSGKIVVTGAK    +  ASRKYA+IV KLGY++AKF EF VQNIVASCDV FPVRLE LAHAHS FCSYEPELFPGLIYRMI PK+VLL+FVSGKVVLTGAKV+ +IY+AF NIY VL  F+K
Sbjct:   30 GQDTNGIVPSIQNVVSTTNLSVNLDLKEIALRARNAEYNPKRFAAVIMRIRDPKTTALIFSSGKIVVTGAKGIDAARFASRKYARIVQKLGYESAKFSEFKVQNIVASCDVQFPVRLEPLAHAHSNFCSYEPELFPGLIYRMINPKVVLLVFVSGKVVLTGAKVKQEIYDAFKNIYPVLCLFQK 213          
BLAST of Gchil5763.t1 vs. uniprot
Match: A0A4Q9KY43_9MICR (Transcription initiation factor TFIID n=3 Tax=Hamiltosporidium TaxID=1176354 RepID=A0A4Q9KY43_9MICR)

HSP 1 Score: 278 bits (711), Expect = 1.970e-90
Identity = 139/192 (72.40%), Postives = 165/192 (85.94%), Query Frame = 0
Query:  153 PQPSNTSGRISHGIVPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERESSRASRKYAKIVHKLGYDNAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRSDIYEAFDNIYHVLQTFRKP 344
            P P+    R   GI+P +QNVVAT NL+ KLDLK IALRARNAEYNPKRFAAVIMRIREPKTTALIF+SGK+V+TGAKSE  S  A++KY++I++KLG+ N +F +F +QNIV+SCD+NF VRLEGLA AH+ +CSYEPELFPGLIYRM+ PKIVLLIFVSGKVVLTGAK+R DIY+AFDNIY VL+ +RKP
Sbjct:   13 PTPTQEQPRTKSGIMPTLQNVVATVNLNCKLDLKSIALRARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVITGAKSEESSKLAAQKYSRIINKLGF-NTRFADFKIQNIVSSCDINFNVRLEGLAFAHNAYCSYEPELFPGLIYRMVDPKIVLLIFVSGKVVLTGAKLRDDIYKAFDNIYTVLRQYRKP 203          
BLAST of Gchil5763.t1 vs. uniprot
Match: A0A0D7AD77_9AGAR (TATA-box binding protein (Fragment) n=2 Tax=Agaricomycetes TaxID=155619 RepID=A0A0D7AD77_9AGAR)

HSP 1 Score: 277 bits (709), Expect = 2.450e-90
Identity = 142/180 (78.89%), Postives = 158/180 (87.78%), Query Frame = 0
Query:  165 GIVPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERESSRASRKYAKIVHKLGYDNAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRSDIYEAFDNIYHVLQTFRKP 344
            GIVP +QN+VAT NLD +LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIF+SGK+VVTGAKSE +S  ASRKYA+IV KLG+D AKF EF +QNIV SCDV FP+RLEGLA++H QF SYEPELFPGLIYRMIKPK+VLLIFVSGK+VLTGAKVR +IY AF+ IY VL  FRKP
Sbjct:   11 GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSRLASRKYARIVQKLGFD-AKFAEFKIQNIVGSCDVKFPIRLEGLAYSHGQFSSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYAAFNTIYTVLCEFRKP 189          
BLAST of Gchil5763.t1 vs. uniprot
Match: A0A165MDV7_EXIGL (TATA-box binding protein n=2 Tax=Agaricomycetes TaxID=155619 RepID=A0A165MDV7_EXIGL)

HSP 1 Score: 277 bits (709), Expect = 5.020e-90
Identity = 147/206 (71.36%), Postives = 167/206 (81.07%), Query Frame = 0
Query:  142 PAPPPTDQPKPPQPSNTSGR---ISHGIVPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERESSRASRKYAKIVHKLGYDNAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRSDIYEAFDNIYHVLQTFRKP 344
            P+P P + P  P P     +      GIVP +QN+VAT NLD +LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIF+SGK+VVTGAKSE +S  ASRKYA+IV KLG+D AKF EF +QNIV SCDV FP+RLEGLA++H QF SYEPELFPGLIYRM+KPK+VLLIFVSGK+VLTGAKVR +IY AF+ IY VL  FRKP
Sbjct:    6 PSPAPLEAPATPAPLTLEQQHITAVDGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSRLASRKYARIVQKLGFD-AKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQFSSYEPELFPGLIYRMLKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVLCEFRKP 210          
BLAST of Gchil5763.t1 vs. uniprot
Match: A0A060S932_PYCCI (Uncharacterized protein n=6 Tax=Polyporales TaxID=5303 RepID=A0A060S932_PYCCI)

HSP 1 Score: 280 bits (716), Expect = 1.140e-89
Identity = 152/215 (70.70%), Postives = 172/215 (80.00%), Query Frame = 0
Query:  133 GRLQPTNSQPAPPPTDQPKPPQPSNTSGR---ISHGIVPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERESSRASRKYAKIVHKLGYDNAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRSDIYEAFDNIYHVLQTFRKP 344
            G  QP N+ P+ PPT  P  P P     +      GIVP +QN+VAT NLD +LDLK IAL ARNAEYNPKRFAAVIMRIR+PKTTALIF+SGK+VVTGAKSE +S  ASRKYA+IV KLG+D AKF EF +QNIV SCDV FP+RLEGLA++H QF SYEPELFPGLIYRMIKPK+VLLIFVSGK+VLTGAKVR +IY AF+ IY VL  FRKP
Sbjct:   96 GSSQP-NAGPSTPPTTIPATPAPLTLEQQHITAVEGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVVTGAKSEDDSRLASRKYARIVQKLGFD-AKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQFSSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVLCEFRKP 308          
BLAST of Gchil5763.t1 vs. uniprot
Match: A0A1L0FEV2_9ASCO (Probable TATA-box-binding protein n=4 Tax=Hanseniaspora TaxID=29832 RepID=A0A1L0FEV2_9ASCO)

HSP 1 Score: 277 bits (708), Expect = 1.360e-89
Identity = 140/179 (78.21%), Postives = 159/179 (88.83%), Query Frame = 0
Query:  165 GIVPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERESSRASRKYAKIVHKLGYDNAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRSDIYEAFDNIYHVLQTFRK 343
            GIVP +QN+VAT NLD KLDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIF+SGK+VVTGAKSE++S  ASRKYA+I+ K+G+D+ KFK+F +QNIVASCDV FP+RLEGLA AH  F SYEPELFPGLIYRM+KPKIVLLIFVSGKVVLTGAK R +IY++F+NIY VL  FRK
Sbjct:   51 GIVPTLQNIVATVNLDCKLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEQDSKLASRKYARIIQKIGFDS-KFKDFKIQNIVASCDVKFPIRLEGLAFAHGAFSSYEPELFPGLIYRMVKPKIVLLIFVSGKVVLTGAKKREEIYQSFENIYPVLSEFRK 228          
BLAST of Gchil5763.t1 vs. uniprot
Match: UPI000441638A (TATA-box binding protein n=1 Tax=Punctularia strigosozonata (strain HHB-11173) TaxID=741275 RepID=UPI000441638A)

HSP 1 Score: 275 bits (704), Expect = 1.400e-89
Identity = 138/180 (76.67%), Postives = 159/180 (88.33%), Query Frame = 0
Query:  165 GIVPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERESSRASRKYAKIVHKLGYDNAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRSDIYEAFDNIYHVLQTFRKP 344
            GIVP++QN+VAT NLD +LDLK IAL ARNAEYNPKRFAAVIMRIR+PKTTALIF+SGK+VVTGAKSE +S  A+RKYA+I+ KLG+D AKF EF +QNIV SCDV FP+RLEGLA++H QF SYEPELFPGLIYRM+KPK+VLLIFVSGK+VLTGAKVR +IY AF+ IY VL  FRKP
Sbjct:   11 GIVPQLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVVTGAKSEDDSRLAARKYARIIQKLGFD-AKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQFSSYEPELFPGLIYRMLKPKVVLLIFVSGKIVLTGAKVREEIYAAFNTIYTVLCEFRKP 189          
The following BLAST results are available for this feature:
BLAST of Gchil5763.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRU9_9FLOR1.880e-12296.32TATA-box-binding protein n=1 Tax=Gracilariopsis ch... [more]
A0A1X6P871_PORUM9.410e-9980.10Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S0ZL16_9RHOD1.950e-9680.42Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S0XI96_9RHOD1.580e-9279.35Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A4Q9KY43_9MICR1.970e-9072.40Transcription initiation factor TFIID n=3 Tax=Hami... [more]
A0A0D7AD77_9AGAR2.450e-9078.89TATA-box binding protein (Fragment) n=2 Tax=Agaric... [more]
A0A165MDV7_EXIGL5.020e-9071.36TATA-box binding protein n=2 Tax=Agaricomycetes Ta... [more]
A0A060S932_PYCCI1.140e-8970.70Uncharacterized protein n=6 Tax=Polyporales TaxID=... [more]
A0A1L0FEV2_9ASCO1.360e-8978.21Probable TATA-box-binding protein n=4 Tax=Hansenia... [more]
UPI000441638A1.400e-8976.67TATA-box binding protein n=1 Tax=Punctularia strig... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000814TATA-box binding proteinPRINTSPR00686TIFACTORIIDcoord: 194..213
score: 84.68
coord: 213..231
score: 80.29
coord: 170..185
score: 59.57
coord: 261..277
score: 66.21
coord: 285..300
score: 83.78
coord: 304..320
score: 85.36
IPR000814TATA-box binding proteinPFAMPF00352TBPcoord: 258..340
e-value: 3.7E-31
score: 106.9
coord: 168..248
e-value: 1.6E-31
score: 108.0
IPR000814TATA-box binding proteinPANTHERPTHR10126TATA-BOX BINDING PROTEINcoord: 122..343
IPR000814TATA-box binding proteinHAMAPMF_00408TATA_bind_prot_archcoord: 164..344
score: 28.474924
IPR012295TBP domain superfamilyGENE3D3.30.310.10coord: 175..261
e-value: 1.3E-82
score: 277.3
IPR012295TBP domain superfamilyGENE3D3.30.310.10coord: 171..341
e-value: 1.3E-82
score: 277.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..138
NoneNo IPR availablePANTHERPTHR10126:SF42TATA BOX-BINDING PROTEIN-LIKE PROTEIN 2-RELATEDcoord: 122..343
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 101..346
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..100
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..73
NoneNo IPR availableSUPERFAMILY55945TATA-box binding protein-likecoord: 166..252
NoneNo IPR availableSUPERFAMILY55945TATA-box binding protein-likecoord: 254..343
NoneNo IPR availableTMHMMTMhelixcoord: 76..98
IPR030491TATA-box binding protein, conserved sitePROSITEPS00351TFIIDcoord: 289..338
IPR033710TATA-box binding protein, eukaryoticCDDcd04516TBP_eukaryotescoord: 167..341
e-value: 4.73399E-120
score: 341.506

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000015_piloncontigtig00000015_pilon:1478812..1480291 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5763.t1Gchil5763.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000015_pilon 1478812..1480291 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5763.t1 ID=Gchil5763.t1|Name=Gchil5763.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=347bp
MVKGSRSGSESGADESKRPPKHTTSTLLLSRVSVVAALLHSAHPIPLPLP
RRHCARVALVSCLPGARVFSARSLALLPALVAAFAPLIFAASPYSLFALI
TNPDRTMQVEPFQTNKPAESPASAHTAAASSAGRLQPTNSQPAPPPTDQP
KPPQPSNTSGRISHGIVPEIQNVVATTNLDVKLDLKKIALRARNAEYNPK
RFAAVIMRIREPKTTALIFSSGKIVVTGAKSERESSRASRKYAKIVHKLG
YDNAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYR
MIKPKIVLLIFVSGKVVLTGAKVRSDIYEAFDNIYHVLQTFRKPRN*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000814TBP
IPR012295TBP_dom_sf
IPR030491TBP_CS
IPR033710TBP_eukaryotic