Gchil5746.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5746.t1
Unique NameGchil5746.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length195
Homology
BLAST of Gchil5746.t1 vs. uniprot
Match: A0A2V3IRW2_9FLOR (40S ribosomal protein S5 n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=A0A2V3IRW2_9FLOR)

HSP 1 Score: 363 bits (932), Expect = 1.150e-126
Identity = 183/194 (94.33%), Postives = 188/194 (96.91%), Query Frame = 0
Query:    1 MAVATEVKLFNRWSFEDIEVTDICLNDYIAVNQKSAVYLPHTAGRYNAKRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDENPIQVLVGAVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 194
            MA  +EVKLFNRWSFE +EV DICL+DYIAV Q+SAVYLPHTAGRYNAKRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTD+NPIQVLV AVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR
Sbjct:    1 MAAVSEVKLFNRWSFEGVEVEDICLSDYIAVKQRSAVYLPHTAGRYNAKRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDQNPIQVLVQAVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 194          
BLAST of Gchil5746.t1 vs. uniprot
Match: R7Q4U9_CHOCR (Ribosomal_S7 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4U9_CHOCR)

HSP 1 Score: 360 bits (923), Expect = 2.320e-124
Identity = 180/194 (92.78%), Postives = 185/194 (95.36%), Query Frame = 0
Query:    1 MAVATEVKLFNRWSFEDIEVTDICLNDYIAVNQKSAVYLPHTAGRYNAKRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDENPIQVLVGAVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 194
            M    E+KLFNRWSFED+ V D+CL DYIAVNQK AVYLPHTAGRYN+KRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTD+NPIQVLV AVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR
Sbjct:   62 MTTVNEIKLFNRWSFEDVRVEDMCLADYIAVNQKHAVYLPHTAGRYNSKRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDQNPIQVLVEAVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 255          
BLAST of Gchil5746.t1 vs. uniprot
Match: A0A5J4Z3W9_PORPP (40S ribosomal protein S5 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3W9_PORPP)

HSP 1 Score: 332 bits (850), Expect = 3.620e-114
Identity = 166/194 (85.57%), Postives = 178/194 (91.75%), Query Frame = 0
Query:    1 MAVATEVKLFNRWSFEDIEVTDICLNDYIAVNQKSAVYLPHTAGRYNAKRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDENPIQVLVGAVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 194
            MA ATEVKLFN+WSFED++V+DI L DYIAV Q  AVYLPHTAGRYN KRF KA CPIVERLVC++MMHGRNNGKK+MA RIVKH FEIIHLLTDENP+QVLV AVVNSGPREDSTRIGSAGTVRRQAVDVSP+RR+NVA+ LL TGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDE+ERVAK  R
Sbjct:    1 MAAATEVKLFNKWSFEDVDVSDIALADYIAVKQNKAVYLPHTAGRYNKKRFHKAGCPIVERLVCAMMMHGRNNGKKVMATRIVKHTFEIIHLLTDENPVQVLVQAVVNSGPREDSTRIGSAGTVRRQAVDVSPLRRVNVAVALLTTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKGCR 194          
BLAST of Gchil5746.t1 vs. uniprot
Match: M2VXU3_GALSU (40S ribosomal protein S5e n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VXU3_GALSU)

HSP 1 Score: 325 bits (832), Expect = 1.800e-111
Identity = 162/190 (85.26%), Postives = 177/190 (93.16%), Query Frame = 0
Query:    5 TEVKLFNRWSFEDIEVTDICLNDYIAVNQKSAVYLPHTAGRYNAKRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDENPIQVLVGAVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 194
            TEVKLFNRWSFED+EV D+ L+DYIAV QK AVYLPHTAGRY  KRFRKAQCPIVERLV SLMMHGRNNGKK+MAVRIVK  FEIIHLLTD NP+QV V AV+N+GPREDSTRIGSAGTVRRQAVDVSP+RR+NVALYL+ TGAREA+FRS+KTI+ECLADE+INA+KGSSNSYAIKKKDEVERVAKANR
Sbjct:    2 TEVKLFNRWSFEDVEVNDMSLHDYIAVKQKYAVYLPHTAGRYAVKRFRKAQCPIVERLVNSLMMHGRNNGKKLMAVRIVKQAFEIIHLLTDANPVQVFVQAVMNAGPREDSTRIGSAGTVRRQAVDVSPLRRVNVALYLITTGAREASFRSMKTISECLADEIINASKGSSNSYAIKKKDEVERVAKANR 191          
BLAST of Gchil5746.t1 vs. uniprot
Match: A0A1X6P5K0_PORUM (Ribosomal_S7 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P5K0_PORUM)

HSP 1 Score: 323 bits (829), Expect = 5.540e-111
Identity = 165/194 (85.05%), Postives = 178/194 (91.75%), Query Frame = 0
Query:    1 MAVATEVKLFNRWSFEDIEVTDICLNDYIAVNQKSAVYLPHTAGRYNAKRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDENPIQVLVGAVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 194
            MA  T V LFNRW FE+++V DI L DYIAV QK AV+LPHTAGRYNAKRFRK+QCPIVERLVCSLMM GRNNGKK+MA RIVKH FEIIHLLTDENP+QVLV AV+N+GPREDSTRIGSAGTVRRQAVDVSPMRR+N+AL LL TGARE+AFRSIKTIAECLADELINA+KGSSNSYAIKKKDEVERVAKANR
Sbjct:    1 MATQT-VALFNRWDFENVDVKDIALIDYIAVKQKYAVFLPHTAGRYNAKRFRKSQCPIVERLVCSLMMKGRNNGKKLMATRIVKHTFEIIHLLTDENPVQVLVDAVINAGPREDSTRIGSAGTVRRQAVDVSPMRRVNMALCLLTTGARESAFRSIKTIAECLADELINASKGSSNSYAIKKKDEVERVAKANR 193          
BLAST of Gchil5746.t1 vs. uniprot
Match: A0A7S2ZL40_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZL40_9RHOD)

HSP 1 Score: 322 bits (825), Expect = 2.180e-110
Identity = 165/191 (86.39%), Postives = 174/191 (91.10%), Query Frame = 0
Query:    5 TEVKLFNRWSFEDIEVTDICLNDYIAVNQK-SAVYLPHTAGRYNAKRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDENPIQVLVGAVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 194
            TEV LFNRWSF+D+EV D  L  YIAV Q  + V++PHT+GRY  KRFRKA CPIVERLVCSLMMHGRNNGKK+MA RIVKH FEIIHLLTDENPIQVLV AVVNSGPREDSTRIGSAGTVRRQAVDVSP+RR+NVALYLL TGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR
Sbjct:    2 TEVMLFNRWSFDDVEVGDFGLAQYIAVKQYGNKVFIPHTSGRYQKKRFRKASCPIVERLVCSLMMHGRNNGKKLMATRIVKHTFEIIHLLTDENPIQVLVNAVVNSGPREDSTRIGSAGTVRRQAVDVSPLRRVNVALYLLTTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 192          
BLAST of Gchil5746.t1 vs. uniprot
Match: A0A7J7IKQ8_9RHOD (Ribosomal protein S5 n=2 Tax=Cyanidiaceae TaxID=265316 RepID=A0A7J7IKQ8_9RHOD)

HSP 1 Score: 322 bits (824), Expect = 3.680e-110
Identity = 157/191 (82.20%), Postives = 178/191 (93.19%), Query Frame = 0
Query:    4 ATEVKLFNRWSFEDIEVTDICLNDYIAVNQKSAVYLPHTAGRYNAKRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDENPIQVLVGAVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 194
            A E+KLFN+WS ED+EV+DI L DYIAV QK AVYLPHTAGRY  +RF+KAQCPIVERLV +LM HGRNNGKK+MA+RIVKH FEIIH+LTD+NP+QVLV AV+NSGPREDSTRIGSAGTVRRQAVDVSP+RR+NVAL+LL TGARE+AFR++KTIAECLADELINAAKGSSNS+AIKKKDE+ERVAKANR
Sbjct:    7 AREIKLFNKWSLEDVEVSDIALADYIAVKQKYAVYLPHTAGRYQTRRFKKAQCPIVERLVNALMKHGRNNGKKLMAIRIVKHSFEIIHVLTDQNPVQVLVDAVINSGPREDSTRIGSAGTVRRQAVDVSPLRRVNVALWLLTTGARESAFRNVKTIAECLADELINAAKGSSNSFAIKKKDEIERVAKANR 197          
BLAST of Gchil5746.t1 vs. uniprot
Match: G3MHT8_AMBMU (Ribosomal_S7 domain-containing protein (Fragment) n=1 Tax=Amblyomma maculatum TaxID=34609 RepID=G3MHT8_AMBMU)

HSP 1 Score: 319 bits (818), Expect = 5.850e-109
Identity = 157/190 (82.63%), Postives = 175/190 (92.11%), Query Frame = 0
Query:    5 TEVKLFNRWSFEDIEVTDICLNDYIAVNQKSAVYLPHTAGRYNAKRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDENPIQVLVGAVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 194
            ++VKLFNRWSFED+ VTDI L+DYI V  K A YLPHTAGRY+AKRFRKAQCPIVERL  SLMMHGRNNGKK+MAVRIVKH  E+IHLLTD+NPIQV+V AV+NSGPRED+TRIGSAG VRRQAVD+SP+RR+N ALYLL TGARE++FR+IKTIAECLADELINAAKGSSNSYAIKKKDE+ERVAKANR
Sbjct:   27 SDVKLFNRWSFEDVSVTDISLSDYIGVAGKHATYLPHTAGRYSAKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMELIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQALYLLTTGARESSFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 216          
BLAST of Gchil5746.t1 vs. uniprot
Match: A0A0E0K3N9_ORYPU (Ribosomal_S7 domain-containing protein n=12 Tax=commelinids TaxID=4734 RepID=A0A0E0K3N9_ORYPU)

HSP 1 Score: 318 bits (815), Expect = 9.280e-109
Identity = 159/190 (83.68%), Postives = 174/190 (91.58%), Query Frame = 0
Query:    6 EVKLFNRWSFEDIEVTDICLNDYIAVNQ-KSAVYLPHTAGRYNAKRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDENPIQVLVGAVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 194
            EVKLFNRWSFED++V DI L DY+AVN  K A YLPHTAGRY+AKRFRKAQCPIVERL  SLMMHGRNNGKKIMAVRIVKH  EIIHLLTD NPIQV+V A++NSGPRED+TRIGSAG VRRQAVD+SP+RR+N A+YLL TGARE+AFR+IKTIAECLADELINAAKGSSNSYAIKKKDE+ERVAKANR
Sbjct:   10 EVKLFNRWSFEDVQVNDISLADYLAVNSTKHATYLPHTAGRYSAKRFRKAQCPIVERLTNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPREDATRIGSAGAVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 199          
BLAST of Gchil5746.t1 vs. uniprot
Match: A0A0D6R8N6_ARACU (Ribosomal_S7 domain-containing protein n=11 Tax=Spermatophyta TaxID=58024 RepID=A0A0D6R8N6_ARACU)

HSP 1 Score: 317 bits (813), Expect = 1.810e-108
Identity = 155/190 (81.58%), Postives = 177/190 (93.16%), Query Frame = 0
Query:    6 EVKLFNRWSFEDIEVTDICLNDYIAVN-QKSAVYLPHTAGRYNAKRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDENPIQVLVGAVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 194
            EVKLFNRW+FED+EV+D+ LNDYIAV+ QK A ++PHTAGRY+ KRFRKAQCPIVERL  SLMMHGRNNGKK+MAVRIVKH  EIIHLLTD+NP+QV+V A++NSGPRED+TRIGSAG VRRQAVD+SP+RR+N A+YLL TGARE+AFR+IKTIAECLADELINAAKGSSNSYAIKKKDE+ERVAKANR
Sbjct:    9 EVKLFNRWTFEDVEVSDLSLNDYIAVSAQKHATFVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPVQVIVDAIINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 198          
The following BLAST results are available for this feature:
BLAST of Gchil5746.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRW2_9FLOR1.150e-12694.3340S ribosomal protein S5 n=2 Tax=Rhodymeniophycida... [more]
R7Q4U9_CHOCR2.320e-12492.78Ribosomal_S7 domain-containing protein n=1 Tax=Cho... [more]
A0A5J4Z3W9_PORPP3.620e-11485.5740S ribosomal protein S5 n=1 Tax=Porphyridium purp... [more]
M2VXU3_GALSU1.800e-11185.2640S ribosomal protein S5e n=1 Tax=Galdieria sulphu... [more]
A0A1X6P5K0_PORUM5.540e-11185.05Ribosomal_S7 domain-containing protein n=1 Tax=Por... [more]
A0A7S2ZL40_9RHOD2.180e-11086.39Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A7J7IKQ8_9RHOD3.680e-11082.20Ribosomal protein S5 n=2 Tax=Cyanidiaceae TaxID=26... [more]
G3MHT8_AMBMU5.850e-10982.63Ribosomal_S7 domain-containing protein (Fragment) ... [more]
A0A0E0K3N9_ORYPU9.280e-10983.68Ribosomal_S7 domain-containing protein n=12 Tax=co... [more]
A0A0D6R8N6_ARACU1.810e-10881.58Ribosomal_S7 domain-containing protein n=11 Tax=Sp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023798Ribosomal protein S7 domainPFAMPF00177Ribosomal_S7coord: 51..194
e-value: 1.3E-37
score: 128.7
IPR005716Ribosomal protein S5/S7, eukaryotic/archaealTIGRFAMTIGR01028TIGR01028coord: 6..194
e-value: 3.1E-90
score: 298.8
IPR005716Ribosomal protein S5/S7, eukaryotic/archaealCDDcd14867uS7_Eukaryotecoord: 8..194
e-value: 2.10317E-136
score: 376.894
IPR000235Ribosomal protein S5/S7PIRSFPIRSF002122RPS7p_RPS7a_RPS5e_RPS7ocoord: 1..194
e-value: 6.3E-41
score: 138.4
IPR000235Ribosomal protein S5/S7PANTHERPTHR11205RIBOSOMAL PROTEIN S7coord: 4..194
IPR036823Ribosomal protein S7 domain superfamilyGENE3D1.10.455.10Ribosomal protein S7 domaincoord: 1..194
e-value: 3.7E-93
score: 312.6
IPR036823Ribosomal protein S7 domain superfamilySUPERFAMILY47973Ribosomal protein S7coord: 8..194
NoneNo IPR availablePANTHERPTHR11205:SF3640S RIBOSOMAL PROTEIN S5coord: 4..194
IPR020606Ribosomal protein S7, conserved sitePROSITEPS00052RIBOSOMAL_S7coord: 60..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000015_piloncontigtig00000015_pilon:1320805..1321389 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5746.t1Gchil5746.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000015_pilon 1320805..1321389 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5746.t1 ID=Gchil5746.t1|Name=Gchil5746.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=195bp
MAVATEVKLFNRWSFEDIEVTDICLNDYIAVNQKSAVYLPHTAGRYNAKR
FRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDENPIQ
VLVGAVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGARE
AAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023798Ribosomal_S7_dom
IPR005716Ribosomal_S5/S7_euk/arc
IPR000235Ribosomal_S5/S7
IPR036823Ribosomal_S7_dom_sf
IPR020606Ribosomal_S7_CS