Gchil5744.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5744.t1
Unique NameGchil5744.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length475
Homology
BLAST of Gchil5744.t1 vs. uniprot
Match: A0A2V3IRY4_9FLOR (Signal recognition particle protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRY4_9FLOR)

HSP 1 Score: 769 bits (1986), Expect = 6.770e-278
Identity = 412/476 (86.55%), Postives = 448/476 (94.12%), Query Frame = 0
Query:    1 MLFDSLTEKMEETVRKMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIKQRAIGEAVIPGVEPGQMLIKIMHEELTAIMGKDQAPLAKRTDGKPTVVLLAGLQGAGKTTAAAKLALYCLKENRSVMLIAGDVYRPAAIDQLKTLGTSIDVEVFSLGTKADPRDIVRKGIEKGTTDKIDTVIVDTAGRQIIDSKLMKELKDVKTITKADETLLVVDAMTGQEAATLTKSFNEEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKFVGVGEQLEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDEKEAERMTKRMMEAKFDFNDFLKQTKMISTMGSLSGVMKMLPGVGSISSSKMAQAEAKLKLADSLIKSMTIKERSSPELLYSGGSARSRLSRISKGAGRSRGDAEELVSDFRKMRDMMSRMSNQMVNSTDG--APAQTAGNRSQRRKSGKKKAQTKTAKRGFG 474
            MLFDSLTEKM ETVRK+RGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIK+RAIG  V+PGV+PGQMLIKIMHEELT IMGKDQAPLAKR+DG+PTVVLLAGLQGAGKTTAAAKLALYCLK+ RSVMLIAGDVYRPAAIDQLKTLG  I+V+VFS+GT ADPRDI+RKGIEKG  +KIDT+IVDTAGRQ+ID+KLMKELKDVK I+K DETLLVVDAMTGQEAATLT+SFNEEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKF+GVGE++EKL+PFIPERMASRILGMGDVLTFVE+A+E+MDE+EAE+MTKRMMEAKFDFNDFLKQTKMIS+MGSL+GVMKMLPGVGSISS+KMAQAEAKLKLADSLIKSMT+KER++PELLYSGGSARSR+ RISKGAGRSR DAE+LV DF KMRDMMSRMS QMVN   G     Q AGNRSQRRK+ KKKAQ +TAKRGFG
Sbjct:    1 MLFDSLTEKMGETVRKLRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIKERAIGAEVVPGVDPGQMLIKIMHEELTEIMGKDQAPLAKRSDGQPTVVLLAGLQGAGKTTAAAKLALYCLKDKRSVMLIAGDVYRPAAIDQLKTLGDMINVDVFSMGTDADPRDIIRKGIEKGKENKIDTLIVDTAGRQVIDAKLMKELKDVKDISKPDETLLVVDAMTGQEAATLTRSFNEEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKFIGVGEKVEKLEPFIPERMASRILGMGDVLTFVERAKEQMDEREAEKMTKRMMEAKFDFNDFLKQTKMISSMGSLAGVMKMLPGVGSISSAKMAQAEAKLKLADSLIKSMTVKERTNPELLYSGGSARSRILRISKGAGRSRDDAEDLVKDFLKMRDMMSRMSKQMVNGQGGPGGSGQPAGNRSQRRKAAKKKAQKRTAKRGFG 476          
BLAST of Gchil5744.t1 vs. uniprot
Match: R7QHF1_CHOCR (Signal recognition particle SRP54 homolog ffh n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHF1_CHOCR)

HSP 1 Score: 652 bits (1682), Expect = 7.370e-232
Identity = 345/462 (74.68%), Postives = 404/462 (87.45%), Query Frame = 0
Query:   17 MRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIKQRAIGEAVIPGVEPGQMLIKIMHEELTAIMGKDQAPLAKRTDGKPTVVLLAGLQGAGKTTAAAKLALYCLKENRSVMLIAGDVYRPAAIDQLKTLGTSIDVEVFSLGTKADPRDIVRKGIEKGTTDKIDTVIVDTAGRQIIDSKLMKELKDVKTITKADETLLVVDAMTGQEAATLTKSFNEEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKFVGVGEQLEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDEKEAERMTKRMMEAKFDFNDFLKQTKMISTMGSLSGVMKMLPGVGS-ISSSKMAQAEAKLKLADSLIKSMTIKERSSPELLYSGGSARSRLSRISKGAGRSRGDAEELVSDFRKMRDMMSRMSNQMVNSTDGAPAQTAG---NRSQRRKSGKKKAQTKTAKRGFG 474
            MRGVDKITEKNV GAMK VKRALLDADVNLRVVN L+KQIK RA+G  V PGVEPGQML+KIMHEELT IMG +QAPLA RTDG+PTVVLLAGLQGAGKTTAAAKLALYCLKE RSVM+IA DVYRPAAIDQLKTLG SI+V+VF +GT  +PR+IVRKG+++G T KI+T+IVDTAGRQ+ID+KLMKELKD+K+++KADETLLVVDAMTGQEAATLT+SFN+EVGITGAILTKLDGDTRGGAALSVQQVSG+PIKF+GVGE+++KL+PF PERMASRILGMGDVLT VEKAQ+ MDE EAE+MT++MME KFDFNDFLKQTKM+S MGSL G+MKM+PG+G  I+ SK+ +AE KLK+ADS+IKSMT +ER +PELLY+  S+RSR+ RI+ G+GRS   A+ ++SDF+KMR MM RMS QMV   DG PA+ A    NR+QRR++ KKKA     +RGFG
Sbjct:    1 MRGVDKITEKNVTGAMKDVKRALLDADVNLRVVNALLKQIKARAVGADVTPGVEPGQMLVKIMHEELTKIMGSNQAPLANRTDGEPTVVLLAGLQGAGKTTAAAKLALYCLKEERSVMMIAADVYRPAAIDQLKTLGKSIEVDVFQMGTDVNPREIVRKGLQEGKTRKINTIIVDTAGRQVIDAKLMKELKDIKSVSKADETLLVVDAMTGQEAATLTRSFNDEVGITGAILTKLDGDTRGGAALSVQQVSGSPIKFIGVGEKVQKLEPFYPERMASRILGMGDVLTIVEKAQDVMDEAEAEKMTRKMMENKFDFNDFLKQTKMLSQMGSLGGLMKMMPGIGGQINESKLKEAEVKLKVADSIIKSMTKQERGNPELLYTAPSSRSRVERIANGSGRSLAQAKNMISDFQKMRTMMQRMSKQMVGGPDGTPAEGAPGSKNRAQRRRNAKKKALRGGERRGFG 462          
BLAST of Gchil5744.t1 vs. uniprot
Match: A0A5J4YVF1_PORPP (Signal recognition particle protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVF1_PORPP)

HSP 1 Score: 559 bits (1440), Expect = 1.130e-193
Identity = 311/488 (63.73%), Postives = 378/488 (77.46%), Query Frame = 0
Query:    1 MLFDSLTEKMEETVRKMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIKQRAIGEAVIPGVEPGQMLIKIMHEELTAIMGKDQAPLAKRTDG--KPTVVLLAGLQGAGKTTAAAKLALYCLKEN--RSVMLIAGDVYRPAAIDQLKTLGTSIDVEVFSLGTKADPRDIVRKGIEKGTTDKIDTVIVDTAGRQIIDSKLMKELKDVKTITKADETLLVVDAMTGQEAATLTKSFNEEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKFVGVGEQLEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDEKEAERMTKRMMEAKFDFNDFLKQTKMISTMGSLSGVMKMLPGVGSISSSKMAQAEAKLKLADSLIKSMTIKERSSPELLYSGGSARSRLSRISKGAGRSRGDAEELVSDFRKMRDMMSRMSNQMVNSTDGA--PAQTAG--------NRSQRRKSGKKKAQTKTAKRGFG 474
            MLFDSL  +M ET+RK++G DK+TEKNV  ++K+V+RALLDADVNL+VVN LIK +K RA+GE V+ GV+PGQ  IKI+++EL  IMG +  PLA++      PTV+LLAGLQGAGKTTAAAKLALYC  E   R V+L A DVYRPAAI+QLKTLG SID EVF++GT  +P  I R+ I     +K DTVIVDTAGRQ+ID+KLM ELK VK     DE LLVVDAMTGQEAA LT++FN+ VGITGAILTKLDGDTRGGAALSV+QVSG PIKFVGVGE++EKL+PF PERMASRILGMGDVL+FVEKAQE+MDE EA R+T++M+EAKFDF DF+KQT+MI+ MGSL G+MKM+PG+  IS +++  AE +LKLA SLI SMT  ER +P+LL    +ARSRL RI+ G+GRS  DA +L+SDF++MR MM+RM   M++   GA  PA   G        NRS RRK GKKK  +K   +GFG
Sbjct:   66 MLFDSLAGQMSETMRKLQGSDKLTEKNVESSVKEVRRALLDADVNLKVVNSLIKDVKARALGEKVLEGVKPGQQFIKIIYDELARIMGSEATPLARKDASAESPTVILLAGLQGAGKTTAAAKLALYCKSEAKPRRVLLCACDVYRPAAIEQLKTLGASIDTEVFAMGTDVEPERIAREAISYAKKNKFDTVIVDTAGRQVIDTKLMAELKRVKNSVTPDEILLVVDAMTGQEAANLTRAFNDAVGITGAILTKLDGDTRGGAALSVKQVSGRPIKFVGVGEKVEKLEPFYPERMASRILGMGDVLSFVEKAQEQMDEAEARRLTQKMVEAKFDFEDFVKQTEMITKMGSLGGMMKMIPGMAGISDAQLTAAERQLKLARSLINSMTRSERRNPDLLIKDRTARSRLQRIAAGSGRSSKDASQLISDFQRMRTMMARMGKTMMDGGPGAAAPAGMGGMPGMAGGTNRSARRKEGKKKQASKPTGKGFG 553          
BLAST of Gchil5744.t1 vs. uniprot
Match: A0A6T5W5G4_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A6T5W5G4_9RHOD)

HSP 1 Score: 556 bits (1433), Expect = 1.210e-192
Identity = 312/511 (61.06%), Postives = 379/511 (74.17%), Query Frame = 0
Query:    1 MLFDSLTEKMEETVRKMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIKQRAIGEAVIPGVEPGQMLIKIMHEELTAIMGKDQAPLAKRTDGKPTVVLLAGLQGAGKTTAAAKLALYC------------LKEN--------RSVMLIAGDVYRPAAIDQLKTLGTSIDVEVFSLGTKADPRDIVRKGIEKGTTDKIDTVIVDTAGRQIIDSKLMKELKDVKTITKADETLLVVDAMTGQEAATLTKSFNEEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKFVGVGEQLEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDEKEAERMTKRMMEAKFDFNDFLKQTKMISTMGSLSGVMKMLPGVGSISSSKMAQAEAKLKLADSLIKSMTIKERSSPELLYSGGSARSRLSRISKGAGRSRGDAEELVSDFRKMRDMMSRMSNQMVNST-----------DGAPAQTA------GNRSQRRKSGKKKAQTKTAKRGFG 474
            MLFD+L  K+ ETVRK++G D+I EKNVA AMK VKRALLDADVNLRVVN L+K+++QRA+G  V+PGV PGQ  +KI++EEL+ +MG D  PLA  T   P V+LLAGLQGAGKTTAAAKLALYC              +N        + V+L+A DVYRPAAI+QLKTLG  I+ EVFSLGT+  P  I ++G+E    +  DTVIVDTAGRQ+IDS LM ELK VK      ETLLVVDAMTGQEAA LT++FN++VGI+GAILTKLDGDTRGGAALSVQQVSG PIKF+GVGE +EKL+PF PERMASRILGMGDVL+FVEKAQE ++EK+A  MTK+M++A+FDF+DFLKQT M+S MGS +G+MKMLPG+  I  +++A AEAKLK++ S+I+SMT  ER  P+LL S  SARSRLSRI+ GAGRS  DA  L+SDF++MR MM+RMS  MV +             G   Q+       GNRS RRKS KKK +    K+GFG
Sbjct:   42 MLFDTLAGKLGETVRKLQGSDRINEKNVAAAMKDVKRALLDADVNLRVVNKLVKEVQQRAVGMEVLPGVTPGQQFVKIIYEELSRVMGADATPLASPTGSDPVVILLAGLQGAGKTTAAAKLALYCKAPPAPPVGADGAAQNAVVARAPAKKVLLVAADVYRPAAIEQLKTLGARIETEVFSLGTELSPEQIAKQGLEYARKNGFDTVIVDTAGRQVIDSNLMSELKRVKAAVSPSETLLVVDAMTGQEAANLTQAFNDQVGISGAILTKLDGDTRGGAALSVQQVSGKPIKFIGVGETVEKLEPFYPERMASRILGMGDVLSFVEKAQEAVEEKQAAEMTKKMLQAQFDFDDFLKQTAMMSKMGSFAGMMKMLPGMSGIDETQLASAEAKLKVSTSMIQSMTKAERRRPDLLISDRSARSRLSRIANGAGRSFTDANTLISDFQRMRTMMARMSRTMVGNAMNSGVDPSAAMSGLEGQSVLQPGMGGNRSARRKSAKKKEKPTAQKKGFG 552          
BLAST of Gchil5744.t1 vs. uniprot
Match: A0A1X6NS74_PORUM (SRP54 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NS74_PORUM)

HSP 1 Score: 495 bits (1275), Expect = 7.160e-170
Identity = 271/423 (64.07%), Postives = 325/423 (76.83%), Query Frame = 0
Query:    1 MLFDSLTEKMEETVRKMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIKQRAIGEAVIPGVEPGQMLIKIMHEELTAIMGKDQAPLAKRTDGK-PTVVLLAGLQGAGKTTAAAKLALY-------------CLKENR------------SVMLIAGDVYRPAAIDQLKTLGTSIDVEVFSLGTKADPRDIVRKGIEKGTTDKIDTVIVDTAGRQIIDSKLMKELKDVKTITKADETLLVVDAMTGQEAATLTKSFNEEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKFVGVGEQLEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDEKEAERMTKRMMEAKFDFNDFLKQTKMISTMGSLSGVMKMLPGVGSISSSKMAQAEAKLKLADSLIKSMTIKERSSPELLYSGG 397
            M+F+SL EKM++TVRK+RG DK+TE N+ GA+K+V+RA+LDADVNLRVVN LI  +++RA+G+ V+ GVEPGQ  IKI++EELT +MGKD APL+ R  G  PTVVLLAGLQGAGKTTAAAKLALY              L+ N              V+L+A DVYRPAA++QL+TL   IDV+VF+        +I R+G+   T  K  TVI+DTAGRQ+I+ KLM+EL+DVK   K DETLLVVDAMTGQEAA LT++FN++VGITGAILTKLDGDTRGGAALSVQ VSG PIKFVG GE++E+L+PF PERMASRILGMGDVLT V+KA+E MD KEAE +TKRM++  FDF DFLKQ+KMISTMGS  G+MKMLPGVGSIS  +MA AE KLKLA  LI SMT  ER  P+LL SGG
Sbjct:   20 MMFESLAEKMDQTVRKLRGTDKMTEANIGGALKEVRRAMLDADVNLRVVNQLIADVRERAVGQDVVAGVEPGQQFIKIIYEELTRVMGKDAAPLSTRAAGAGPTVVLLAGLQGAGKTTAAAKLALYVKSRKAEKPSAAAALEANPPXXXXXXXGPPPKVLLVACDVYRPAAVEQLQTLAGMIDVDVFTDDLSLGAVEIARRGLAVATEGKYHTVIIDTAGRQVINDKLMRELRDVKAAAKPDETLLVVDAMTGQEAANLTRAFNDDVGITGAILTKLDGDTRGGAALSVQSVSGKPIKFVGTGEKVERLEPFFPERMASRILGMGDVLTLVDKAEEAMDAKEAEALTKRMVDNTFDFEDFLKQSKMISTMGSFGGLMKMLPGVGSISGQQMAAAEQKLKLATCLINSMTPTERKQPDLLASGG 442          
BLAST of Gchil5744.t1 vs. uniprot
Match: Q111T7_TRIEI (Signal recognition particle protein n=19 Tax=Oscillatoriales TaxID=1150 RepID=Q111T7_TRIEI)

HSP 1 Score: 488 bits (1256), Expect = 7.370e-167
Identity = 257/433 (59.35%), Postives = 331/433 (76.44%), Query Frame = 0
Query:    2 LFDSLTEKMEETVRKMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIKQRAIGEAVIPGVEPGQMLIKIMHEELTAIMGKDQAPLAKRTDGKPTVVLLAGLQGAGKTTAAAKLALYCLKENRSVMLIAGDVYRPAAIDQLKTLGTSIDVEVFSLGTKADPRDIVRKGIEKGTTDKIDTVIVDTAGRQIIDSKLMKELKDVKTITKADETLLVVDAMTGQEAATLTKSFNEEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKFVGVGEQLEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDEKEAERMTKRMMEAKFDFNDFLKQTKMISTMGSLSGVMKMLPGVGSISSSKMAQAEAKLKLADSLIKSMTIKERSSPELLYSGGSARSRLSRISKGAGRSRGDAEELVSDFRKMRDMMSRM 434
            +F++L +++E   +K+RG DKIT+ N+  A+ +V+RALL+ADVNL+VV G I ++  +A G  V+ GV P Q  IKI+H+EL  IMG+  APLAK  D  PT+VL+AGLQG GKTTA+AKLAL+  KENRS +L+A DVYRPAAIDQL TLG  IDV VF LGT  DP +I +KG+EK   D ID VI+DTAGR  ID  +M EL  +K   K  ETLLVVDAMTGQEAATLT++FN+++GITGAILTK+DGDTRGGAALSV+++SG PIKF+GVGE++E LQPF PERMASRILGMGDVLT VEKAQEE D  +AE+M ++++ AKFDF DFLKQT+++  MGSL G+MK++PG+  IS  K+ Q E +LK  +S+I SMT +ER +PELL     + SR  RI+ G+G +  D  +LVSDF++MR +M +M
Sbjct:    1 MFEALADRLEVAWKKLRGQDKITDSNIQQALGEVRRALLEADVNLQVVKGFIAEVSSKAKGADVLTGVRPDQQFIKIVHDELAQIMGESNAPLAK-ADQPPTIVLMAGLQGTGKTTASAKLALHLRKENRSALLVATDVYRPAAIDQLVTLGKQIDVPVFELGTDIDPVEIAQKGLEKAKADGIDIVIIDTAGRLQIDQDMMAELARIKAAVKPQETLLVVDAMTGQEAATLTRTFNDQIGITGAILTKMDGDTRGGAALSVRRISGQPIKFIGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEFDIADAEKMQEKILSAKFDFTDFLKQTRLMKNMGSLGGIMKLIPGMNKISDDKLQQGETQLKRCESMINSMTRQERQNPELLAK---SPSRRRRIAGGSGYAEKDVSKLVSDFQRMRSLMQKM 429          
BLAST of Gchil5744.t1 vs. uniprot
Match: B8HVM2_CYAP4 (Signal recognition particle protein n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) TaxID=395961 RepID=B8HVM2_CYAP4)

HSP 1 Score: 488 bits (1256), Expect = 9.040e-167
Identity = 252/433 (58.20%), Postives = 343/433 (79.21%), Query Frame = 0
Query:    2 LFDSLTEKMEETVRKMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIKQRAIGEAVIPGVEPGQMLIKIMHEELTAIMGKDQAPLAKRTDGKPTVVLLAGLQGAGKTTAAAKLALYCLKENRSVMLIAGDVYRPAAIDQLKTLGTSIDVEVFSLGTKADPRDIVRKGIEKGTTDKIDTVIVDTAGRQIIDSKLMKELKDVKTITKADETLLVVDAMTGQEAATLTKSFNEEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKFVGVGEQLEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDEKEAERMTKRMMEAKFDFNDFLKQTKMISTMGSLSGVMKMLPGVGSISSSKMAQAEAKLKLADSLIKSMTIKERSSPELLYSGGSARSRLSRISKGAGRSRGDAEELVSDFRKMRDMMSRM 434
            +FD+L+E++E   +K+RG DKI+E N+  A+++V+RALL+ADVNL+VV   I++++ +A+G  VI G+ P Q  IKI+++EL  +MG+  APLA+  +  PT+VL+AGLQG GKTTAAAKLAL+  K+NRS +L+A D+YRPAAIDQL TLG  IDV VF LGT+ +P +I R+G+E G +  +DTVIVDTAGR  ID ++M EL  +KT     ETLLVVDAMTGQEAA LT++F+E++GITGAILTK+DGDTRGGAALSV+Q+SG PIKF+GVGE++E LQPF P+R+ASR+LGMGDVLT VEKAQEE+D  +AE+++++++EAKFDF DFLKQT+++  MGSL G+MK++PG+  IS+ ++ + E +LK A+S+I SMT  ER +PELL S   + SR  RI+KG+G S  D  +LVSDF+KMR +M +M
Sbjct:    1 MFDALSERLEAAWKKLRGQDKISETNIQEALREVRRALLEADVNLQVVKDFIEEVRVKALGAEVIAGIRPDQQFIKIVYDELVQVMGETNAPLAE-AETAPTIVLMAGLQGTGKTTAAAKLALHLRKQNRSALLVATDIYRPAAIDQLVTLGKQIDVPVFQLGTEVNPVEIARQGVEHGRSLNVDTVIVDTAGRLQIDPEMMAELAQIKTTIAPQETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDTRGGAALSVRQISGQPIKFIGVGEKVEALQPFYPDRLASRVLGMGDVLTLVEKAQEEVDLADAEKLSRKILEAKFDFTDFLKQTRLLKNMGSLGGIMKLIPGMNKISADQLQKGEDQLKRAESMINSMTPDERRNPELLSS---SPSRRRRIAKGSGHSLEDVSKLVSDFQKMRSLMQQM 429          
BLAST of Gchil5744.t1 vs. uniprot
Match: A0YSB3_LYNSP (Signal recognition particle protein n=3 Tax=Oscillatoriaceae TaxID=1892254 RepID=A0YSB3_LYNSP)

HSP 1 Score: 487 bits (1253), Expect = 1.890e-166
Identity = 252/433 (58.20%), Postives = 333/433 (76.91%), Query Frame = 0
Query:    2 LFDSLTEKMEETVRKMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIKQRAIGEAVIPGVEPGQMLIKIMHEELTAIMGKDQAPLAKRTDGKPTVVLLAGLQGAGKTTAAAKLALYCLKENRSVMLIAGDVYRPAAIDQLKTLGTSIDVEVFSLGTKADPRDIVRKGIEKGTTDKIDTVIVDTAGRQIIDSKLMKELKDVKTITKADETLLVVDAMTGQEAATLTKSFNEEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKFVGVGEQLEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDEKEAERMTKRMMEAKFDFNDFLKQTKMISTMGSLSGVMKMLPGVGSISSSKMAQAEAKLKLADSLIKSMTIKERSSPELLYSGGSARSRLSRISKGAGRSRGDAEELVSDFRKMRDMMSRM 434
            +FD+L E+++   +K+RG DKITE N+  A+K V+RALL+ADVNL+VV   + ++ ++A G  V  GV PG+  +KI+H+EL  +MG+   PLA   D  PT+VL+AGLQG GKTTA AKLAL+  KENR+ +++A DVYRPAAIDQLKTLG  I+V VF LG+ ADP +I R+G+E   T  +DTVI+DTAGR  ID  +M EL  +K + +  +TLLVVDAMTGQEAATLT++FNE++GI+GAILTKLDGD+RGGAALS++++SGAPIKFVGVGE++E LQPF PERMASRILGMGDVLT VEKAQEE D  +AE+M +++MEAKFDF DFLKQT+++  MGSL G+ K++PG+  IS  ++ Q E +LK ++++I SMT +ER +PE+L S   + SR  RI+KG+G S  D   LV DF+KMR MM +M
Sbjct:    1 MFDALAERLDSAWKKLRGQDKITESNIQDALKDVRRALLEADVNLQVVKEFVAEVGEQAQGSQVFSGVRPGEQFVKIVHDELVKVMGESNVPLAT-ADSPPTIVLMAGLQGTGKTTATAKLALHLRKENRTALMVATDVYRPAAIDQLKTLGQQIEVPVFELGSDADPVEIARQGVEYAKTQGVDTVIIDTAGRLQIDQDMMAELARIKAVVQPHDTLLVVDAMTGQEAATLTQTFNEQIGISGAILTKLDGDSRGGAALSIRRISGAPIKFVGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEFDLADAEKMQQKIMEAKFDFTDFLKQTRLMKNMGSLGGLAKLIPGMNKISKEQLEQGEQQLKRSEAMINSMTTEERKNPEVLAS---SPSRRRRIAKGSGHSEKDVMRLVGDFQKMRGMMQQM 429          
BLAST of Gchil5744.t1 vs. uniprot
Match: K9RTX2_SYNP3 (Signal recognition particle protein n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) TaxID=195253 RepID=K9RTX2_SYNP3)

HSP 1 Score: 487 bits (1253), Expect = 1.890e-166
Identity = 250/432 (57.87%), Postives = 341/432 (78.94%), Query Frame = 0
Query:    2 LFDSLTEKMEETVRKMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIKQRAIGEAVIPGVEPGQMLIKIMHEELTAIMGKDQAPLAKRTDGKPTVVLLAGLQGAGKTTAAAKLALYCLKENRSVMLIAGDVYRPAAIDQLKTLGTSIDVEVFSLGTKADPRDIVRKGIEKGTTDKIDTVIVDTAGRQIIDSKLMKELKDVKTITKADETLLVVDAMTGQEAATLTKSFNEEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKFVGVGEQLEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDEKEAERMTKRMMEAKFDFNDFLKQTKMISTMGSLSGVMKMLPGVGSISSSKMAQAEAKLKLADSLIKSMTIKERSSPELLYSGGSARSRLSRISKGAGRSRGDAEELVSDFRKMRDMMSR 433
            +FD+L +++E   + +RG DKI+E N+  A+++V+RALL+ADVNL+VV   I++++QRA+G  V+ GV P Q  IKI+++EL  +MG+   PLA+ +   PTV+L+AGLQGAGKTTA AKLAL+  KENR+ +L+A D+YRPAAIDQL TLG  I+V VF LGT+ +P +I R+GI KG    +DTVIVDTAGR  ID+ +M EL D+K     DE LLVVDAMTGQEAA LT++F+E++GITGAILTK+DGDTRGGAALSV+Q+SG PIKF+GVGE++E LQPF P+R+ASRILGMGDVLT VEKAQEE+D  +AE MT++++EA+FDFNDFLKQT+++  MGSL G+MK++PG+G IS+ ++ Q E++LK A+S+I SMT +ER +P+LL +   + SR  R+++G+G    D  +LVSDF++MR MM +
Sbjct:    1 MFDALADRLESAWKSLRGQDKISETNIQDALREVRRALLEADVNLQVVKTFIEEVRQRALGAEVVAGVRPDQQFIKIVYDELVTVMGESNVPLAQASQA-PTVILMAGLQGAGKTTATAKLALHLRKENRTTLLVATDIYRPAAIDQLLTLGKQINVPVFELGTEVNPVEIARQGIAKGRELGVDTVIVDTAGRLQIDADMMAELGDIKKTVTPDEVLLVVDAMTGQEAANLTQAFHEQIGITGAILTKMDGDTRGGAALSVRQISGQPIKFIGVGEKVEALQPFYPDRLASRILGMGDVLTLVEKAQEEVDLADAENMTRKILEAQFDFNDFLKQTRLLKNMGSLGGIMKLIPGMGKISNEQLEQGESQLKRAESMINSMTRQERENPQLLAN---SPSRKKRVAQGSGHKLEDVAKLVSDFQRMRSMMQQ 428          
BLAST of Gchil5744.t1 vs. uniprot
Match: D4ZMY5_ARTPN (Signal recognition particle protein n=8 Tax=Microcoleaceae TaxID=1892252 RepID=D4ZMY5_ARTPN)

HSP 1 Score: 486 bits (1250), Expect = 3.830e-166
Identity = 254/433 (58.66%), Postives = 336/433 (77.60%), Query Frame = 0
Query:    2 LFDSLTEKMEETVRKMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIKQRAIGEAVIPGVEPGQMLIKIMHEELTAIMGKDQAPLAKRTDGKPTVVLLAGLQGAGKTTAAAKLALYCLKENRSVMLIAGDVYRPAAIDQLKTLGTSIDVEVFSLGTKADPRDIVRKGIEKGTTDKIDTVIVDTAGRQIIDSKLMKELKDVKTITKADETLLVVDAMTGQEAATLTKSFNEEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKFVGVGEQLEKLQPFIPERMASRILGMGDVLTFVEKAQEEMDEKEAERMTKRMMEAKFDFNDFLKQTKMISTMGSLSGVMKMLPGVGSISSSKMAQAEAKLKLADSLIKSMTIKERSSPELLYSGGSARSRLSRISKGAGRSRGDAEELVSDFRKMRDMMSRM 434
            +FD+L+E++E   +K+RG DKITE N+  A+K+V+RALL+ADVNL VV   IK++  +A G  V+ GV+PGQ  IKI+H+EL  +MG+   PLA+     PT+VL+AGLQG GKTTA+AKLAL+  KENRS +L+A DVYRPAAIDQL TLG  I+V VF LG  ADP +I R+GIE G    IDT+I+DTAGR  ID  +M EL  +K   +  ETLLVVDAMTGQEAATLT++FN+ +GITGAILTK+DGD+RGGAALS+++VSGAPIKFVGVGE++E LQPF PERMASRILGMGD+LT VEKA+EE D  +AE+M ++++EAKFDF DFLKQT+++  MGSL G++K++PG+  IS  ++   E++LK ++++I SMTI+ER +PELL +   + SR  R++KGAG +  D   LVSDF++MR +M +M
Sbjct:    1 MFDALSERLESAWKKLRGQDKITESNIQEALKEVRRALLEADVNLMVVKDFIKEVGVQAQGSQVVSGVKPGQQFIKIVHDELVKVMGESNVPLAEAQQ-PPTIVLMAGLQGTGKTTASAKLALHLQKENRSSLLVATDVYRPAAIDQLMTLGKQINVPVFELGKDADPVEIARQGIEYGKAQGIDTIIIDTAGRLQIDQNMMAELAQIKETVQPHETLLVVDAMTGQEAATLTQTFNDRIGITGAILTKMDGDSRGGAALSIRRVSGAPIKFVGVGEKVEALQPFYPERMASRILGMGDILTLVEKAEEEFDIADAEKMQEKILEAKFDFTDFLKQTRLMKNMGSLGGLVKLIPGMNKISQEQLDAGESQLKRSEAMINSMTIEERKNPELLSN---SPSRRKRVAKGAGYAEKDVMRLVSDFQRMRSLMQQM 429          
The following BLAST results are available for this feature:
BLAST of Gchil5744.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRY4_9FLOR6.770e-27886.55Signal recognition particle protein n=1 Tax=Gracil... [more]
R7QHF1_CHOCR7.370e-23274.68Signal recognition particle SRP54 homolog ffh n=1 ... [more]
A0A5J4YVF1_PORPP1.130e-19363.73Signal recognition particle protein n=1 Tax=Porphy... [more]
A0A6T5W5G4_9RHOD1.210e-19261.06Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A1X6NS74_PORUM7.160e-17064.07SRP54 domain-containing protein n=1 Tax=Porphyra u... [more]
Q111T7_TRIEI7.370e-16759.35Signal recognition particle protein n=19 Tax=Oscil... [more]
B8HVM2_CYAP49.040e-16758.20Signal recognition particle protein n=1 Tax=Cyanot... [more]
A0YSB3_LYNSP1.890e-16658.20Signal recognition particle protein n=3 Tax=Oscill... [more]
K9RTX2_SYNP31.890e-16657.87Signal recognition particle protein n=1 Tax=Synech... [more]
D4ZMY5_ARTPN3.830e-16658.66Signal recognition particle protein n=8 Tax=Microc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 305..325
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 433..454
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 455..474
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 432..474
NoneNo IPR availableCDDcd18539SRP_Gcoord: 103..295
e-value: 1.88934E-102
score: 302.595
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainSMARTSM00962SRP54_3coord: 102..297
e-value: 2.0E-97
score: 339.7
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainPFAMPF00448SRP54coord: 102..297
e-value: 1.6E-72
score: 243.2
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainPROSITEPS00300SRP54coord: 270..283
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 101..302
e-value: 3.6E-7
score: 39.8
IPR013822Signal recognition particle SRP54, helical bundleSMARTSM00963SRP54_N_2coord: 2..87
e-value: 3.4E-27
score: 106.4
IPR013822Signal recognition particle SRP54, helical bundlePFAMPF02881SRP54_Ncoord: 6..83
e-value: 7.6E-17
score: 61.3
IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilyGENE3D1.10.260.30coord: 312..439
e-value: 2.1E-29
score: 104.2
IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilySUPERFAMILY47446Signal peptide-binding domaincoord: 328..431
IPR004125Signal recognition particle, SRP54 subunit, M-domainPFAMPF02978SRP_SPBcoord: 328..431
e-value: 3.5E-23
score: 82.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 91..286
e-value: 9.4E-113
score: 378.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 43..355
IPR004780Signal recognition particle proteinTIGRFAMTIGR00959TIGR00959coord: 3..432
e-value: 5.0E-159
score: 527.6
IPR004780Signal recognition particle proteinPANTHERPTHR11564:SF7SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN, CHLOROPLASTICcoord: 3..457
IPR042101Signal recognition particle SRP54, N-terminal domain superfamilyGENE3D1.20.120.140coord: 4..307
e-value: 9.4E-113
score: 378.0
IPR022941Signal recognition particle, SRP54 subunitPANTHERPTHR11564SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54coord: 3..457
IPR022941Signal recognition particle, SRP54 subunitHAMAPMF_00306SRP54coord: 6..438
score: 31.684956

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000015_piloncontigtig00000015_pilon:1314906..1316330 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5744.t1Gchil5744.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000015_pilon 1314906..1316330 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5744.t1 ID=Gchil5744.t1|Name=Gchil5744.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=475bp
MLFDSLTEKMEETVRKMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVN
GLIKQIKQRAIGEAVIPGVEPGQMLIKIMHEELTAIMGKDQAPLAKRTDG
KPTVVLLAGLQGAGKTTAAAKLALYCLKENRSVMLIAGDVYRPAAIDQLK
TLGTSIDVEVFSLGTKADPRDIVRKGIEKGTTDKIDTVIVDTAGRQIIDS
KLMKELKDVKTITKADETLLVVDAMTGQEAATLTKSFNEEVGITGAILTK
LDGDTRGGAALSVQQVSGAPIKFVGVGEQLEKLQPFIPERMASRILGMGD
VLTFVEKAQEEMDEKEAERMTKRMMEAKFDFNDFLKQTKMISTMGSLSGV
MKMLPGVGSISSSKMAQAEAKLKLADSLIKSMTIKERSSPELLYSGGSAR
SRLSRISKGAGRSRGDAEELVSDFRKMRDMMSRMSNQMVNSTDGAPAQTA
GNRSQRRKSGKKKAQTKTAKRGFG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000897SRP54_GTPase_dom
IPR003593AAA+_ATPase
IPR013822Signal_recog_particl_SRP54_hlx
IPR036891Signal_recog_part_SRP54_M_sf
IPR004125Signal_recog_particle_SRP54_M
IPR027417P-loop_NTPase
IPR004780SRP
IPR042101SRP54_N_sf
IPR022941SRP54