Gchil5739.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5739.t1
Unique NameGchil5739.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length225
Homology
BLAST of Gchil5739.t1 vs. uniprot
Match: A0A2V3IRX9_9FLOR (Spondin-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRX9_9FLOR)

HSP 1 Score: 332 bits (851), Expect = 3.650e-113
Identity = 170/235 (72.34%), Postives = 193/235 (82.13%), Query Frame = 0
Query:    1 MIRQITILFLSLVVVQASTSSRR---------RTCTGESEYVVNFTNVLTPERFGDRIPEGGLVFSPLAGASHSNRVSLLTVRSLASPQVEQIAETGQNGRFVALAESL--VGKGVRTAAAATGPTMPGNYTALRFTVDCENPFITVVGMIAPSPDWLVQISNIPMMRRGRFLERRRGTLIAYDAGTDDGANFTSPVDASLDMPTEPQKNIAPLVEDETDAFNGRFIGTYVITRV 224
            MIRQ+T L  +LV++  +++S+R         RTC+G++EYVVNFTN LTP RFG RIP+ GLV+SPLAGASHSNRVSLLTVRSLASPQVEQIAETGQNGRFVALAE L    +GV+T A A GPTMPGN T LRFTVDCE+PFITVVGMIAPSPDWLVQ+ N+ ++RRGRF+  R    IAYDAGTDDGA FTSP DASLDMP+EPQKNIAPLVED+TD FNGRFIG Y I RV
Sbjct:    1 MIRQLTSLLFALVLIGTASASQRTGMRQTRRMRTCSGQAEYVVNFTNFLTPRRFGRRIPKTGLVYSPLAGASHSNRVSLLTVRSLASPQVEQIAETGQNGRFVALAEHLRDTEQGVKTVAGADGPTMPGNSTTLRFTVDCEHPFITVVGMIAPSPDWLVQVGNVNLVRRGRFISFRXXXXIAYDAGTDDGAEFTSPTDASLDMPSEPQKNIAPLVEDDTDPFNGRFIGVYTIRRV 235          
BLAST of Gchil5739.t1 vs. uniprot
Match: A0A2V3IUA8_9FLOR (Spondin-1 n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUA8_9FLOR)

HSP 1 Score: 296 bits (757), Expect = 5.020e-99
Identity = 149/226 (65.93%), Postives = 178/226 (78.76%), Query Frame = 0
Query:    1 MIRQITILFLSLVVVQASTSSRRRTCTGESEYVVNFTNVLTPERFGDRIPEGGLVFSPLAGASHSNRVSLLTVRSLASPQVEQIAETGQNGRFVALAESL--VGKGVRTAAAATGPTMPGNYTALRFTVDCENPFITVVGMIAPSPDWLVQISNIPMMRRGRFLERRRGTLIAYDAGTDDGANFTSPVDASLDMPTEPQKNIAPLVEDETDAFNGRFIGTYVITRV 224
            MI Q+T   LSL + QA  + RR  C G++ Y V F N+LTP  FG  IP+ GLVFSPLAGASHSNR+S LT+R  ASPQVEQIAETGQNGRFVALA++L    +GVR+ A+A GPTMPG  T L +TVDC +PFIT++GMIAPSPDW+VQI+N  M+R G+F+ R  GT+IAYDAGTDDG  FTSPVDASLDMPTEPQKNIAPLVEDETD F GR +G ++I ++
Sbjct:    1 MIHQVTAFLLSLALFQAVAAERR--CRGKAIYKVTFRNLLTPANFGKLIPDNGLVFSPLAGASHSNRISFLTIRGFASPQVEQIAETGQNGRFVALAKNLRRQRRGVRSVASAKGPTMPGKSTTLFYTVDCAHPFITMLGMIAPSPDWIVQINNRNMVRDGKFITRDSGTMIAYDAGTDDGREFTSPVDASLDMPTEPQKNIAPLVEDETDRFQGRIVGRFLIQKI 224          
BLAST of Gchil5739.t1 vs. uniprot
Match: A0A2V3IT76_9FLOR (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT76_9FLOR)

HSP 1 Score: 294 bits (752), Expect = 2.890e-98
Identity = 148/226 (65.49%), Postives = 178/226 (78.76%), Query Frame = 0
Query:    1 MIRQITILFLSLVVVQASTSSRRRTCTGESEYVVNFTNVLTPERFGDRIPEGGLVFSPLAGASHSNRVSLLTVRSLASPQVEQIAETGQNGRFVALAESL--VGKGVRTAAAATGPTMPGNYTALRFTVDCENPFITVVGMIAPSPDWLVQISNIPMMRRGRFLERRRGTLIAYDAGTDDGANFTSPVDASLDMPTEPQKNIAPLVEDETDAFNGRFIGTYVITRV 224
            MIRQ+T+  LSL ++QA ++     C+G++ Y V+F N+LTP+ FG+ IPE GLVFSPLAGASHSNR+S LT+R  ASPQVEQIAETGQNGRFV LA +L   G+GV   AAA GPTMPGN+T L + VDC +PFIT++GMIAPSPDW+VQI+N  M+R G+F+ R  GTLIAYD GTD G  FTSPVDASLDMPTEPQ NIAPLVEDETD F GR +G + I R+
Sbjct:    1 MIRQVTVFLLSLALLQAVSADGH--CSGKAIYRVSFQNLLTPKNFGNLIPENGLVFSPLAGASHSNRISFLTIRGFASPQVEQIAETGQNGRFVTLARNLRRQGRGVLHVAAAKGPTMPGNFTNLFYAVDCAHPFITMLGMIAPSPDWIVQINNRNMIRDGKFITRESGTLIAYDVGTDSGREFTSPVDASLDMPTEPQMNIAPLVEDETDRFQGRVVGRFHIQRI 224          
BLAST of Gchil5739.t1 vs. uniprot
Match: A0A2V3IRW7_9FLOR (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRW7_9FLOR)

HSP 1 Score: 291 bits (745), Expect = 3.130e-97
Identity = 148/225 (65.78%), Postives = 175/225 (77.78%), Query Frame = 0
Query:    1 MIRQITILFLSLVVVQASTSSRRRTCTGESEYVVNFTNVLTPERFGDRIPEGGLVFSPLAGASHSNRVSLLTVRSLASPQVEQIAETGQNGRFVALAESLVGKG-VRTAAAATGPTMPGNYTALRFTVDCENPFITVVGMIAPSPDWLVQISNIPMMRRGRFLERRRGTLIAYDAGTDDGANFTSPVDASLDMPTEPQKNIAPLVEDETDAFNGRFIGTYVITRV 224
            MIR++  +FL+L + +A+  S    C+G++ Y V+FTN+LTPE FG+ IP  GLVFSPLAGASHSNR S  T+R  ASPQVEQIAETGQNGRFVA A +LV  G VR+ A+A GPTMPG  T+L FTVDC  PFIT++GM+APSPDW+VQI+N  M R G F+    GTLIAYD GTDDG  FTSPVDASLD+PTEPQKNIAPLVEDETD F GR IGT+ I +V
Sbjct:    1 MIRKVLAVFLTLALFEAAVGSG---CSGQAVYQVSFTNLLTPENFGELIPSTGLVFSPLAGASHSNRFSFFTIRGFASPQVEQIAETGQNGRFVAQATNLVPTGKVRSVASADGPTMPGTTTSLLFTVDCARPFITMLGMVAPSPDWIVQINNRNMFRDGMFISSENGTLIAYDTGTDDGREFTSPVDASLDIPTEPQKNIAPLVEDETDRFEGRIIGTFDIRKV 222          
BLAST of Gchil5739.t1 vs. uniprot
Match: A0A2V3IS06_9FLOR (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS06_9FLOR)

HSP 1 Score: 285 bits (730), Expect = 6.410e-95
Identity = 145/226 (64.16%), Postives = 170/226 (75.22%), Query Frame = 0
Query:    1 MIRQITILFLSLVVVQASTSSRRRTCTGESEYVVNFTNVLTPERFGDRIPEGGLVFSPLAGASHSNRVSLLTVRSLASPQVEQIAETGQNGRFVALAESLV--GKGVRTAAAATGPTMPGNYTALRFTVDCENPFITVVGMIAPSPDWLVQISNIPMMRRGRFLERRRGTLIAYDAGTDDGANFTSPVDASLDMPTEPQKNIAPLVEDETDAFNGRFIGTYVITRV 224
            MIR++    L+L V +   +     CTG + Y V F N+LTPE FGD IPE GLVFSPLAGASHSNR+S  T+R  ASPQVEQIAETGQNGRFV LA +L    +GV + +AA GPTMPGN T L F VDC +PFIT++GMIAPSPDW+VQ++N P++R G F+    GTLIAYD GTDDG  FTSPVDASLDMPTEPQ+NIAPLVEDETD F GR +G + I RV
Sbjct:    1 MIRKLIAFVLALAVFEVVLAEGH--CTGRALYRVTFRNLLTPENFGDLIPETGLVFSPLAGASHSNRISFFTIRGFASPQVEQIAETGQNGRFVRLARNLKYSRRGVLSVSAANGPTMPGNTTTLYFFVDCAHPFITMLGMIAPSPDWIVQLNNRPLIRDGEFISGENGTLIAYDTGTDDGREFTSPVDASLDMPTEPQQNIAPLVEDETDRFEGRIVGMFYIQRV 224          
BLAST of Gchil5739.t1 vs. uniprot
Match: A0A2V3IRX0_9FLOR (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRX0_9FLOR)

HSP 1 Score: 278 bits (711), Expect = 4.640e-92
Identity = 144/225 (64.00%), Postives = 164/225 (72.89%), Query Frame = 0
Query:    1 MIRQITILFLSLVVVQASTSSRRRTCTGESEYVVNFTNVLTPERFGDRIPEGGLVFSPLAGASHSNRVSLLTVRSLASPQVEQIAETGQNGRFVALAESLVGKG-VRTAAAATGPTMPGNYTALRFTVDCENPFITVVGMIAPSPDWLVQISNIPMMRRGRFLERRRGTLIAYDAGTDDGANFTSPVDASLDMPTEPQKNIAPLVEDETDAFNGRFIGTYVITRV 224
            MIRQ+T  FLSL + QA   S    C+G + Y V FTN+LT E FGD IP  GLVFSPLAGASHSNR S  T+R  ASPQVEQIAETGQNGRFV  A+++   G V T AAA GP++PG  T+L F VDC  PFIT++GMIAPSPDW+VQI+N  M R G F+ R  GTLIAYD GTDDG  FT P DASLDMPTEPQ NI PLVEDETD F GR +G + I R+
Sbjct:    1 MIRQVTAFFLSLALFQAVAESA---CSGRAVYRVTFTNLLTAENFGDLIPPNGLVFSPLAGASHSNRFSFFTIRGFASPQVEQIAETGQNGRFVTQAKNMQRTGKVFTVAAADGPSLPGTDTSLFFAVDCARPFITMLGMIAPSPDWIVQINNRNMFRNGMFIPRENGTLIAYDTGTDDGREFTPPGDASLDMPTEPQMNIVPLVEDETDRFEGRIVGRFNIMRI 222          
BLAST of Gchil5739.t1 vs. uniprot
Match: A0A2V3IT49_9FLOR (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT49_9FLOR)

HSP 1 Score: 269 bits (688), Expect = 1.560e-88
Identity = 138/226 (61.06%), Postives = 167/226 (73.89%), Query Frame = 0
Query:    1 MIRQITILFLSLVVVQASTSSRRRTCTGESEYVVNFTNVLTPERFGDRIPEGGLVFSPLAGASHSNRVSLLTVRSLASPQVEQIAETGQNGRFVALAESLVGK--GVRTAAAATGPTMPGNYTALRFTVDCENPFITVVGMIAPSPDWLVQISNIPMMRRGRFLERRRGTLIAYDAGTDDGANFTSPVDASLDMPTEPQKNIAPLVEDETDAFNGRFIGTYVITRV 224
            M+RQ+T  FL L +V       R  C+G + Y V+F N+LTPE FG  IP+ GLVFSPL GASHS+R+S LTVR  AS QVEQIAETG N RFV +A +L  +  GV   AAA GPT+PG YT L + VDC +PFIT++GMIAPSPDW+VQI+N  M+R G+F+ R  GTLIAYDAGTDDG  FT P DAS+D P+EPQKNIAPLVEDETD F GR +G ++I R+
Sbjct:    1 MMRQVTAFFLVLTLVHVVPVEGR--CSGRAVYRVSFHNLLTPENFGKLIPQRGLVFSPLVGASHSHRISFLTVRGFASRQVEQIAETGDNSRFVTMARNLRSQRHGVLHVAAANGPTLPGKYTTLFYPVDCAHPFITMLGMIAPSPDWIVQINNRNMLRDGKFVARDFGTLIAYDAGTDDGREFTIPADASVDKPSEPQKNIAPLVEDETDRFQGRIVGRFLIQRI 224          
BLAST of Gchil5739.t1 vs. uniprot
Match: A0A2V3IF45_9FLOR (Spondin-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF45_9FLOR)

HSP 1 Score: 249 bits (636), Expect = 1.190e-80
Identity = 128/222 (57.66%), Postives = 157/222 (70.72%), Query Frame = 0
Query:    6 TILFLSLVVVQASTSSRRRTCTGESEYVVNFTNVLTPERFGDRIPEGGLVFSPLAGASHSNRVSLLTVRSLASPQVEQIAETGQNGRFVALAESLVG--KGVRTAAAATGPTMPGNYTALRFTVDCENPFITVVGMIAPSPDWLVQISNIPMM-RRGRFLERRRGTLIAYDAGTDDGANFTSPVDASLDMPTEPQKNIAPLVEDETDAFNGRFIGTYVITRV 224
            +I+   ++ + A     +  C+GE+ Y V F N+LTP+ FG +IPE GL FSPLA  SHSNR S LTVR  ASPQVEQIAETG NGRF+ALAE+L G  +GVR  A   G   PG    +  TV+CENPFIT + MIAPSPDW+VQ++N+  +   G F +R  G LIAYDAGTDDG +FT+  DAS DMP+EPQKNIAPL EDETD F+GR +GTYV  R+
Sbjct:    3 SIILFPILAIYALIGQSQAMCSGEAVYQVIFNNMLTPQTFGSKIPETGLNFSPLAAVSHSNRQSFLTVRGFASPQVEQIAETGMNGRFLALAENLKGAEQGVRDVAGGMGAG-PGMNQTVELTVNCENPFITALSMIAPSPDWIVQVNNMNTLDMNGEFRQRLGGNLIAYDAGTDDGGDFTAASDASFDMPSEPQKNIAPLFEDETDPFDGRMVGTYVFVRI 223          
BLAST of Gchil5739.t1 vs. uniprot
Match: A0A2V3IFK3_9FLOR (Spondin domain-containing protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFK3_9FLOR)

HSP 1 Score: 154 bits (389), Expect = 1.710e-44
Identity = 72/121 (59.50%), Postives = 88/121 (72.73%), Query Frame = 0
Query:  104 GVRTAAAATGPTMPGNYTALRFTVDCENPFITVVGMIAPSPDWLVQISNIPMMRRGRFLERRRGTLIAYDAGTDDGANFTSPVDASLDMPTEPQKNIAPLVEDETDAFNGRFIGTYVITRV 224
            GV   AAA GPT+PG YT L + VDC +PFI ++GMIAPSP+W+VQ +N  M+R  +F+    GTLIA DAGTDDG  FT P DAS D P+EPQKNIAPLVEDE D F  R +G ++I R+
Sbjct:   11 GVLHVAAANGPTLPGKYTTLSYPVDCSHPFIMMLGMIAPSPNWIVQTNNRNMLRDVKFVAGDFGTLIASDAGTDDGQEFTIPADASFDKPSEPQKNIAPLVEDEADRFERRIVGKFLIQRI 131          
BLAST of Gchil5739.t1 vs. uniprot
Match: A0A8A4TSD2_9BACT (Spondin domain-containing protein n=1 Tax=Sulfidibacter corallicola TaxID=2818388 RepID=A0A8A4TSD2_9BACT)

HSP 1 Score: 105 bits (262), Expect = 3.820e-24
Identity = 75/191 (39.27%), Postives = 98/191 (51.31%), Query Frame = 0
Query:   47 DRIPEG---GLVFSPLAGASHSNRVSLLTVRSLASPQVEQIAETGQNGRFVALAESLVGKGVRTA--AAATGPTMPGNY------TALRFTVDCENPFITVVGMIAPSPDWLVQISNIPMMRRGRFLERRRGTLIAYDAGTDDGANFTSPVDASLDMPTEPQKNIAPLVEDETDAFNGRFI--GTYVITRV 224
            D  PEG   G  FSPL GA+H   + +     LA+P +E +AETG        A SL+   +++A  A   G  M G        T   F VD   P +T+V MIAPSPDW + +  + +   GR+LE R  TL AYDAGTD G  +TSP     +M T+PQ+ IA L E   D   G  +  GT+   RV
Sbjct:   68 DTHPEGFPGGAHFSPLIGANHHGNLVIWEPGGLATPGMESMAETG--------ATSLLAGEIQSAIDAETAGDLMQGGAIDSPGDTDFLFQVDRRFPRVTLVTMIAPSPDWFLGVHGLLLFEGGRWLEERTVTLYAYDAGTDSGPEYTSP-----NMDTQPQEPIARLTESPFDV-GGTLVPLGTFRFERV 244          
The following BLAST results are available for this feature:
BLAST of Gchil5739.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRX9_9FLOR3.650e-11372.34Spondin-2 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IUA8_9FLOR5.020e-9965.93Spondin-1 n=3 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IT76_9FLOR2.890e-9865.49Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IRW7_9FLOR3.130e-9765.78Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IS06_9FLOR6.410e-9564.16Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IRX0_9FLOR4.640e-9264.00Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IT49_9FLOR1.560e-8861.06Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IF45_9FLOR1.190e-8057.66Spondin-2 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IFK3_9FLOR1.710e-4459.50Spondin domain-containing protein n=2 Tax=Gracilar... [more]
A0A8A4TSD2_9BACT3.820e-2439.27Spondin domain-containing protein n=1 Tax=Sulfidib... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009465Spondin, N-terminalPFAMPF06468Spond_Ncoord: 31..206
e-value: 4.0E-26
score: 92.3
IPR009465Spondin, N-terminalPROSITEPS51020SPONDINcoord: 20..207
score: 23.920094
IPR038678Spondin, N-terminal domain superfamilyGENE3D2.60.40.2130coord: 14..214
e-value: 5.2E-38
score: 132.8
NoneNo IPR availablePANTHERPTHR11311SPONDINcoord: 55..203
NoneNo IPR availablePANTHERPTHR11311:SF16SPONDIN-1coord: 55..203
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..224
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000015_piloncontigtig00000015_pilon:1236854..1237528 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5739.t1Gchil5739.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000015_pilon 1236854..1237528 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5739.t1 ID=Gchil5739.t1|Name=Gchil5739.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=225bp
MIRQITILFLSLVVVQASTSSRRRTCTGESEYVVNFTNVLTPERFGDRIP
EGGLVFSPLAGASHSNRVSLLTVRSLASPQVEQIAETGQNGRFVALAESL
VGKGVRTAAAATGPTMPGNYTALRFTVDCENPFITVVGMIAPSPDWLVQI
SNIPMMRRGRFLERRRGTLIAYDAGTDDGANFTSPVDASLDMPTEPQKNI
APLVEDETDAFNGRFIGTYVITRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009465Spondin_N
IPR038678Spondin_N_sf