Gchil5713.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5713.t1
Unique NameGchil5713.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length281
Homology
BLAST of Gchil5713.t1 vs. uniprot
Match: A0A2V3IH64_9FLOR (Single-strand selective monofunctional uracil DNA glycosylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH64_9FLOR)

HSP 1 Score: 368 bits (945), Expect = 1.770e-126
Identity = 165/230 (71.74%), Postives = 197/230 (85.65%), Query Frame = 0
Query:   45 MSDELSKLSFGKPVTHVYNPLQYAWEAHEWYVKKFGNSKKKVLLVGMNPGPWGMAQTGIPFGEVTAVREFLKIPADISIGRPRNENLKRPVSGLSCPRSEVSGKRLWREWAQTDYNEAETFFSTFFVHNYCPLMFMESGGRNRTPVQLKAAERNQLLEACDTALKKVVEVLEVQVVCGVGGFAEKRCTAALQDTGVTIRSLLHPSPASPVANRGWAPQARKQIEDVLQSL 274
            MSD+LS LSF  PVTHVYNPL+YAW+AH+WYV+++  SKKKVLLVGMNPGPWGMAQTG+PFGEVTAVR+FL++P D+ I RP+ EN KRPV+GL+C RSEVSGKRLWREWAQ +Y +  TFF+TFFVHNYCPLMFMESGGRNRTPVQL+AAERN LL  CD AL+KVV+ L+V+ VCGVG FAE+RC  ALQ   V +  LLHPSPASP+ANRGW  QA+KQIE++++ +
Sbjct:    1 MSDDLSTLSFSSPVTHVYNPLEYAWDAHKWYVRQYATSKKKVLLVGMNPGPWGMAQTGVPFGEVTAVRDFLRMPLDMKIDRPKPENAKRPVTGLACTRSEVSGKRLWREWAQVEYGDTATFFNTFFVHNYCPLMFMESGGRNRTPVQLRAAERNSLLGICDDALRKVVKALDVRAVCGVGAFAEQRCKTALQGENVVVHCLLHPSPASPIANRGWVQQAKKQIEELMEKI 230          
BLAST of Gchil5713.t1 vs. uniprot
Match: A0A8J7C7P3_9BACT (Single-stranded DNA-binding protein n=2 Tax=unclassified Candidatus Sulfomarinibacter TaxID=2886016 RepID=A0A8J7C7P3_9BACT)

HSP 1 Score: 275 bits (704), Expect = 6.970e-90
Identity = 132/234 (56.41%), Postives = 173/234 (73.93%), Query Frame = 0
Query:   37 HILEAEKRMSDELSKLSFGKPVTHVYNPLQYAWEAHEWYVKKFGNSKKKVLLVGMNPGPWGMAQTGIPFGEVTAVREFLKIPADISIGRPRNENLKRPVSGLSCPRSEVSGKRLWREWAQTDYNEAETFFSTFFVHNYCPLMFMESGGRNRTPVQLKAAERNQLLEACDTALKKVVEVLEVQVVCGVGGFAEKRCTAALQDTGVTIRSLLHPSPASPVANRGWAPQARKQIEDV 270
            +++E  + +++E+ +L F  PVTHVYNPL YAW+AH  Y++++G++ KKVL +GMNPGPWGMAQTG+PFGEV AVR++L+I  D +IGRP  E+ KRPV GL+C RSEVSG RLW  WA+  +   E FF  FF+ NYCPL FMES GRNRTP +L  +ER  L EACD AL+K VE L   +V GVG FAE R  +AL + GV I  +LHPSPASP ANRGW+ +A +++ ++
Sbjct:    2 NLVEIAQELAEEVDRLEFAPPVTHVYNPLDYAWDAHTRYLERYGDAPKKVLFLGMNPGPWGMAQTGVPFGEVGAVRDWLRI--DAAIGRPDPEHPKRPVHGLACTRSEVSGARLWG-WARDLFATPERFFERFFIANYCPLAFMESTGRNRTPDKLPVSERKPLFEACDRALRKTVEYLRSDLVVGVGTFAEGRAWSALGEAGVRIGRILHPSPASPAANRGWSERATRELREL 232          
BLAST of Gchil5713.t1 vs. uniprot
Match: A0A8J6Y912_9BACT (Single-stranded DNA-binding protein n=1 Tax=Candidatus Sulfomarinibacter kjeldsenii TaxID=2885994 RepID=A0A8J6Y912_9BACT)

HSP 1 Score: 272 bits (696), Expect = 1.300e-88
Identity = 132/235 (56.17%), Postives = 170/235 (72.34%), Query Frame = 0
Query:   36 SHILEAEKRMSDELSKLSFGKPVTHVYNPLQYAWEAHEWYVKKFGNSKKKVLLVGMNPGPWGMAQTGIPFGEVTAVREFLKIPADISIGRPRNENLKRPVSGLSCPRSEVSGKRLWREWAQTDYNEAETFFSTFFVHNYCPLMFMESGGRNRTPVQLKAAERNQLLEACDTALKKVVEVLEVQVVCGVGGFAEKRCTAALQDTGVTIRSLLHPSPASPVANRGWAPQARKQIEDV 270
            S ++E  +R+++E+ +L F  PV+HVYNPL YAW+AH  Y+  +G++ K+VL +GMNPGPWGMAQTG+PFGEV+AVR++L I A+I   RP +E+ KR + GL+C RSEVSG RLW  WA+  +     FFS FFV NYCPL F+E GGRNRTP +L A ER  LLE CD AL   VE L  ++V GVG FAE R  AAL+D  V I  +LHPSPASP ANRGWA QA +++ ++
Sbjct:    5 SLLVEIARRLAEEVDRLRFTAPVSHVYNPLDYAWQAHSQYLDLYGDAPKEVLFLGMNPGPWGMAQTGVPFGEVSAVRDWLGISAEIR--RPEHEHPKRQIMGLACTRSEVSGARLWG-WAREVFGTPSRFFSRFFVANYCPLAFLEEGGRNRTPDKLPAGERGPLLEICDRALIHTVEFLRPEIVVGVGAFAEGRAQAALEDVDVAIGRILHPSPASPAANRGWAEQATRELREL 236          
BLAST of Gchil5713.t1 vs. uniprot
Match: A0A5N8YG97_9CHLR (Single-strand selective monofunctional uracil-DNA glycosylase n=3 Tax=SAR202 cluster TaxID=648176 RepID=A0A5N8YG97_9CHLR)

HSP 1 Score: 266 bits (681), Expect = 2.370e-86
Identity = 128/237 (54.01%), Postives = 175/237 (73.84%), Query Frame = 0
Query:   34 IASHILEAEKRMSDELSKLSFGKPVTHVYNPLQYAWEAHEWYVKKFGNSKKKVLLVGMNPGPWGMAQTGIPFGEVTAVREFLKIPADISIGRPRNENLKRPVSGLSCPRSEVSGKRLWREWAQTDYNEAETFFSTFFVHNYCPLMFMESGGRNRTPVQLKAAERNQLLEACDTALKKVVEVLEVQVVCGVGGFAEKRCTAALQDTGVTIRSLLHPSPASPVANRGWAPQARKQIEDV 270
            ++ +I  A + +S   + L+F +PVTHVYNPL+YAW AHE Y+ +  N+KKKV+ +GMNPGP+GMAQTG+PFGEV+AVR+++ I A IS  +P NE+ KRP+ GL C RSEVSG+RLW  +A+  +N A+TFF+  F+ N+CPL+FME  G+NRTP +L   E   L+E CD+ L KVVE+LE + +  VGGFA+KR  AAL D  + I  +LHPSPASP AN+GWA QA  Q++++
Sbjct:    3 VSKNIKAAARSLSKACNDLNFSEPVTHVYNPLEYAWPAHEQYITRAANNKKKVVFLGMNPGPFGMAQTGVPFGEVSAVRDWIGINAPIS--KPENEHPKRPIEGLKCARSEVSGRRLWGLFAER-FNSADTFFTDHFIINHCPLVFMEKSGKNRTPDKLPNDEITPLMEVCDSHLHKVVEMLEPEWLIAVGGFAQKRALAALYDLDIRIGKILHPSPASPAANKGWAKQATTQLKEL 236          
BLAST of Gchil5713.t1 vs. uniprot
Match: A0A7Z9IJ06_9BACT (Single-strand selective monofunctional uracil-DNA glycosylase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9IJ06_9BACT)

HSP 1 Score: 265 bits (678), Expect = 8.530e-86
Identity = 127/235 (54.04%), Postives = 168/235 (71.49%), Query Frame = 0
Query:   34 IASHILEAEKRMSDELSKLSFGKPVTHVYNPLQYAWEAHEWYVKKFGNSKKKVLLVGMNPGPWGMAQTGIPFGEVTAVREFLKIPADISIGRPRNENLKRPVSGLSCPRSEVSGKRLWREWAQTDYNEAETFFSTFFVHNYCPLMFMESGGRNRTPVQLKAAERNQLLEACDTALKKVVEVLEVQVVCGVGGFAEKRCTAALQDTGVTIRSLLHPSPASPVANRGWAPQARKQIE 268
            ++  +++  + +S  +  LSF  PV  VYNPL+YAWE+H+ Y++K+G+ K ++LL+GMNPGPWGMAQTG+PFGEV AVR+FL I   ++  +P  E+ KRPV G  CPRSEVSG+R+W EWA+  +   E FFS F++ NYCPL FME GG+NRTP +LK  ER+ + E CD AL+K V+VL    + GVGGFA+KR    L      I ++LHPSPASP+ANRGWAPQ  KQ E
Sbjct:    1 MSKRLIKITRELSKGVDALSFSAPVHAVYNPLEYAWESHKSYLEKYGDGKGRILLLGMNPGPWGMAQTGVPFGEVNAVRDFLGICNPVN--KPIQEHPKRPVQGFDCPRSEVSGRRVW-EWAKDRFETPEQFFSRFYIINYCPLCFMEEGGKNRTPDKLKPEERDAVFEVCDVALRKFVDVLAPSKIIGVGGFAKKRAMKTLGRED--IETILHPSPASPMANRGWAPQIEKQFE 230          
BLAST of Gchil5713.t1 vs. uniprot
Match: A0A2E5TSL3_9BACT (Single-stranded DNA-binding protein n=3 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2E5TSL3_9BACT)

HSP 1 Score: 263 bits (671), Expect = 7.790e-85
Identity = 126/235 (53.62%), Postives = 173/235 (73.62%), Query Frame = 0
Query:   33 DIASHILEAEKRMSDELSKLSFGKPVTHVYNPLQYAWEAHEWYVKKFGNSKKKVLLVGMNPGPWGMAQTGIPFGEVTAVREFLKIPADISIGRPRNENLKRPVSGLSCPRSEVSGKRLWREWAQTDYNEAETFFSTFFVHNYCPLMFMESGGRNRTPVQLKAAERNQLLEACDTALKKVVEVLEVQVVCGVGGFAEKRCTAALQDTGVTIRSLLHPSPASPVANRGWAPQARKQI 267
            +++++I  A +++S   S L+F +PVTHVYNPL+YAW AHE Y+ +    KKKV+ +GMNPGP+GMAQTG+PFGEV AVR+++ I  ++ IG+P  E+  RP+ GL C RSEVSG+RLW  +A+  ++ A  FF   F+ N+CPL+FME  GRNRTP +L  +E + L+EACD+ L++VVE+LE + +  VGGFAEKR   AL +  V+I  +LHPSPASP ANRGWA QA KQ+
Sbjct:    2 NVSTNIAAAARQLSTTCSALNFSEPVTHVYNPLEYAWAAHEQYISRAAIGKKKVVFLGMNPGPFGMAQTGVPFGEVAAVRDWIGI--NVEIGKPSKEHPNRPIEGLVCKRSEVSGRRLWGLFAE-HFDSANEFFQDHFIANHCPLVFMEETGRNRTPDKLPTSEASPLMEACDSHLREVVEILEPEWLVAVGGFAEKRAKIALSNLKVSIGKILHPSPASPAANRGWAEQATKQM 233          
BLAST of Gchil5713.t1 vs. uniprot
Match: A0A2D9TGN5_9DELT (Single-stranded DNA-binding protein n=1 Tax=Sandaracinus sp. TaxID=2024858 RepID=A0A2D9TGN5_9DELT)

HSP 1 Score: 262 bits (670), Expect = 1.100e-84
Identity = 125/225 (55.56%), Postives = 162/225 (72.00%), Query Frame = 0
Query:   44 RMSDELSKLSFGKPVTHVYNPLQYAWEAHEWYVKKFGNSKKKVLLVGMNPGPWGMAQTGIPFGEVTAVREFLKIPADISIGRPRNENLKRPVSGLSCPRSEVSGKRLWREWAQTDYNEAETFFSTFFVHNYCPLMFMESGGRNRTPVQLKAAERNQLLEACDTALKKVVEVLEVQVVCGVGGFAEKRCTAALQDTGVTIRSLLHPSPASPVANRGWAPQARKQIE 268
            R+SD L++LSF +PVTHVY+P +YA  AH  Y+K+FG  +K+V+ +GMNPGPWGMAQTG+PFGEV+  R+++ +     IG+P  E+ KRP+ G  C RSEVSG+RLW  WA+  +  AE FF  F+V NYCPL+FME   RNR P +L  AER  LL+ACD AL +V+E L+ ++V GVG +A KR  AAL D GV I  +LHPSPASP ANRGW  QA  ++E
Sbjct:   13 RLSDRLAELSFAEPVTHVYDPTRYARAAHHDYLKRFGRGRKEVVFLGMNPGPWGMAQTGVPFGEVSYARDWMGVKG--RIGKPEVEHPKRPIEGFECARSEVSGRRLWG-WAEQRFGTAEAFFERFYVANYCPLVFMEESARNRVPEKLPVAERQPLLDACDEALVEVIEALQPELVVGVGAWARKRAEAALGDLGVRIGQVLHPSPASPRANRGWQEQAEAELE 234          
BLAST of Gchil5713.t1 vs. uniprot
Match: A0A2E3YI85_9BACT (Single-stranded DNA-binding protein n=3 Tax=Gemmatimonadetes TaxID=142182 RepID=A0A2E3YI85_9BACT)

HSP 1 Score: 262 bits (669), Expect = 1.510e-84
Identity = 129/235 (54.89%), Postives = 169/235 (71.91%), Query Frame = 0
Query:   36 SHILEAEKRMSDELSKLSFGKPVTHVYNPLQYAWEAHEWYVKKFGNSKKKVLLVGMNPGPWGMAQTGIPFGEVTAVREFLKIPADISIGRPRNENLKRPVSGLSCPRSEVSGKRLWREWAQTDYNEAETFFSTFFVHNYCPLMFMESGGRNRTPVQLKAAERNQLLEACDTALKKVVEVLEVQVVCGVGGFAEKRCTAALQDTGVTIRSLLHPSPASPVANRGWAPQARKQIEDV 270
            S ++ A +R+  +L  LSF  PVTHVYNP+ YA  +HE Y+ ++G   K+VL +GMNPGP+GM QTG+PFGEV AVR++LKI A ++  RP  E+ KRPV G  CPRSEVSG+RLW  +A+  + E + FF+  FV NYCPLMFME  GRNRTP +L A+ER+ +   CD  L+++V  LE + V GVGGFA+K+   AL D GV I ++LHPSPASP ANRGWAPQA  Q+ ++
Sbjct:    3 SPLVNAARRLRRQLKDLSFDPPVTHVYNPIDYARRSHELYLARWGAGTKRVLFLGMNPGPFGMGQTGVPFGEVAAVRDWLKIEAPVA--RPNIEHPKRPVDGFDCPRSEVSGRRLWGLFAER-FAEPQAFFADHFVANYCPLMFMEDSGRNRTPDKLSASERDAVQAPCDDHLRRLVSTLEPRWVVGVGGFAQKQAQRALADQGVEIVTILHPSPASPAANRGWAPQATTQMRNL 234          
BLAST of Gchil5713.t1 vs. uniprot
Match: A0A202DWB5_9BACT (Single-stranded DNA-binding protein n=1 Tax=bacterium J17 TaxID=1932695 RepID=A0A202DWB5_9BACT)

HSP 1 Score: 261 bits (668), Expect = 2.800e-84
Identity = 127/242 (52.48%), Postives = 168/242 (69.42%), Query Frame = 0
Query:   35 ASHILEAEKRMSDELSKLSFGKPVTHVYNPLQYAWEAHEWYVKKFGNSKKKVLLVGMNPGPWGMAQTGIPFGEVTAVREFLKIPADISIGRPRNENLKRPVSGLSCPRSEVSGKRLWREWAQTDYNEAETFFSTFFVHNYCPLMFMESGGRNRTPVQLKAAERNQLLEACDTALKKVVEVLEVQVVCGVGGFAEKRCTAALQDTGVTIRSLLHPSPASPVANRGWAPQARKQIEDVLQSLEG 276
            A  ++   +++S+E+ KL F  PV H YNPL YA E  E Y+K+FG+  K+V+LVGMNPGP+GMAQTG+PFG+V  VR+++ I     +G+P +E+ KR V G  CPR EVSG+RLW  WA+  + E E+FF  FFV NYCPL FME GG+NRTP +L   ER+ L   CD AL+++VE L  + V GVG FA+ R  +A+   G+ + S+LHPSPASP+ANRGWAPQA K  E +  SL G
Sbjct:    9 AMKLISISRKLSEEVGKLKFSPPVVHCYNPLDYAKEPGEVYLKRFGSGSKEVVLVGMNPGPFGMAQTGVPFGDVGMVRDWMGIKE--KVGKPADEHPKRIVEGFDCPRGEVSGRRLWG-WAKDRFVEPESFFDKFFVWNYCPLCFMEEGGKNRTPDKLPTEERDALFALCDQALREIVEALSPKFVIGVGKFAQARIESAIDTEGLVVGSILHPSPASPIANRGWAPQAEKGFEKLGVSLGG 247          
BLAST of Gchil5713.t1 vs. uniprot
Match: A0A2E7RL52_9BACT (Single-stranded DNA-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E7RL52_9BACT)

HSP 1 Score: 261 bits (666), Expect = 3.900e-84
Identity = 120/233 (51.50%), Postives = 169/233 (72.53%), Query Frame = 0
Query:   38 ILEAEKRMSDELSKLSFGKPVTHVYNPLQYAWEAHEWYVKKFGNSKKKVLLVGMNPGPWGMAQTGIPFGEVTAVREFLKIPADISIGRPRNENLKRPVSGLSCPRSEVSGKRLWREWAQTDYNEAETFFSTFFVHNYCPLMFMESGGRNRTPVQLKAAERNQLLEACDTALKKVVEVLEVQVVCGVGGFAEKRCTAALQDTGVTIRSLLHPSPASPVANRGWAPQARKQIEDV 270
            +L+  KR+ +E+S L F  PVTHVYNPL+YAW+ H+ Y++++  +  + + VGMNPGPWGMAQTG+PFGEV  VR++LK+  D  + +P++ + KRP+ GL CPRSEVSG+RLW  WA   ++ A++FF  FFV N+CPL FME  G+NRTP +L  AER  L + CD AL + V+ L+ ++V GVG FA  + T  L+D  + I  +LHPSPASP+ANRGWA QA +Q++++
Sbjct:    3 VLQIAKRLREEVSGLRFADPVTHVYNPLEYAWDLHKQYLQRYARNGVQAIWVGMNPGPWGMAQTGVPFGEVGMVRDWLKL--DGKVEQPKSLHPKRPIQGLDCPRSEVSGRRLWT-WASNFFDSADSFFDRFFVFNWCPLCFMEESGKNRTPDKLHIAEREPLRKVCDRALIETVQALQPKMVVGVGKFARDQATRILRDVDIEIGQILHPSPASPMANRGWAEQAERQLQEL 232          
The following BLAST results are available for this feature:
BLAST of Gchil5713.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IH64_9FLOR1.770e-12671.74Single-strand selective monofunctional uracil DNA ... [more]
A0A8J7C7P3_9BACT6.970e-9056.41Single-stranded DNA-binding protein n=2 Tax=unclas... [more]
A0A8J6Y912_9BACT1.300e-8856.17Single-stranded DNA-binding protein n=1 Tax=Candid... [more]
A0A5N8YG97_9CHLR2.370e-8654.01Single-strand selective monofunctional uracil-DNA ... [more]
A0A7Z9IJ06_9BACT8.530e-8654.04Single-strand selective monofunctional uracil-DNA ... [more]
A0A2E5TSL3_9BACT7.790e-8553.62Single-stranded DNA-binding protein n=3 Tax=Verruc... [more]
A0A2D9TGN5_9DELT1.100e-8455.56Single-stranded DNA-binding protein n=1 Tax=Sandar... [more]
A0A2E3YI85_9BACT1.510e-8454.89Single-stranded DNA-binding protein n=3 Tax=Gemmat... [more]
A0A202DWB5_9BACT2.800e-8452.48Single-stranded DNA-binding protein n=1 Tax=bacter... [more]
A0A2E7RL52_9BACT3.900e-8451.50Single-stranded DNA-binding protein n=1 Tax=Planct... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036895Uracil-DNA glycosylase-like domain superfamilyGENE3D3.40.470.10coord: 33..271
e-value: 3.7E-97
score: 326.1
IPR036895Uracil-DNA glycosylase-like domain superfamilySUPERFAMILY52141Uracil-DNA glycosylase-likecoord: 34..267
IPR005122Uracil-DNA glycosylase-likePFAMPF03167UDGcoord: 79..254
e-value: 6.3E-8
score: 32.8
IPR039134Single-strand selective monofunctional uracil DNA glycosylasePANTHERPTHR13235SINGLE-STRAND SELECTIVE MONOFUNCTIONAL URACIL DNA GLYCOSYLASEcoord: 19..268
IPR039134Single-strand selective monofunctional uracil DNA glycosylaseCDDcd19374UDG-F3_SMUG1-likecoord: 36..269
e-value: 1.25647E-136
score: 382.999

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000015_piloncontigtig00000015_pilon:1011234..1012162 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5713.t1Gchil5713.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000015_pilon 1011234..1012162 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5713.t1 ID=Gchil5713.t1|Name=Gchil5713.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=281bp
MVITRKRSLTNASVSAVSMSEDLNTKRKKRTADIASHILEAEKRMSDELS
KLSFGKPVTHVYNPLQYAWEAHEWYVKKFGNSKKKVLLVGMNPGPWGMAQ
TGIPFGEVTAVREFLKIPADISIGRPRNENLKRPVSGLSCPRSEVSGKRL
WREWAQTDYNEAETFFSTFFVHNYCPLMFMESGGRNRTPVQLKAAERNQL
LEACDTALKKVVEVLEVQVVCGVGGFAEKRCTAALQDTGVTIRSLLHPSP
ASPVANRGWAPQARKQIEDVLQSLEGSASE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036895Uracil-DNA_glycosylase-like_sf
IPR005122Uracil-DNA_glycosylase-like
IPR039134SMUG1