Gchil5702.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5702.t1
Unique NameGchil5702.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length453
Homology
BLAST of Gchil5702.t1 vs. uniprot
Match: R7QK76_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QK76_CHOCR)

HSP 1 Score: 134 bits (338), Expect = 6.620e-34
Identity = 73/140 (52.14%), Postives = 93/140 (66.43%), Query Frame = 0
Query:    1 MATDSPHSHPSAPLLHGSLAILLLLLAGSTFSLGLFIPGVEAAAKPGQHLDGIWETAMGAMHFLSGPIMILCSLYLDAGVESS-SRLVPLSRTKNFRLRVVNLICVVAFASFSISASGAAHSNRVALFSGVAVQAFPLAI 139
            MA     S   A   HG+LA++LLLL GSTF+LG+FIP VE  A P  HLDG+WETAMGAMH  S P+MI   ++LDAG++      +P    K+ RLR++NL+  V+FA  + S  GAAHS+R  L  GV +QAFPLAI
Sbjct:    1 MAHPLQDSPSYASFFHGALAVVLLLLGGSTFALGIFIPQVEDFASPPHHLDGLWETAMGAMHLFSAPVMIFAGIFLDAGLDDPLPASLPFWVGKSSRLRLLNLLSAVSFACLAFSGYGAAHSDRFYLLFGVTMQAFPLAI 140          
BLAST of Gchil5702.t1 vs. uniprot
Match: A0A7S2ZMJ0_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZMJ0_9RHOD)

HSP 1 Score: 75.1 bits (183), Expect = 6.870e-11
Identity = 79/362 (21.82%), Postives = 162/362 (44.75%), Query Frame = 0
Query:   97 LRVVNLICVVAFASFSISASGAAHSNRVALFSGVAVQAFPLAILFLTCMQALLVWYPHRSGLAIGLGHAAFGAGTVITTELFSLVLTRTDPVFAIYTASAILSTSAFFPAMFMRWPSENEISKQEEENCLLERL-EAIERIPVSHIIRLPNFWLYIFTIFSTSVTYMLNPYYFKLGHLFGRPLDKLVLYFNISNIASTLCSLFVSTLT-----------DFVRSNTGFFFSGSKNIMFFLMFVQTICLYLSINVNNTQNFSGFVVLKATMKIIEMSHVGCAALLARDLFGLSNSCIAFGFGAGLALGGGEAASAWLMG--TVEALARPISAPSDYNPFYWIAVVWSTMGLICVMAVQRHKNS 444
            LR ++LI         + A G + S     + G  +      +L++  +  L   +    G   G+G  +   G+++   ++S+       + ++      +  +    ++ +    E+E+  +E    L ++  +   ++ +  I+R PN + ++ T FS +V     P Y   G   G      V  F++S+  S    L V++L            D +++  G F SG+ N+   L+ +Q++ + L  +     +F  FV+       +        ALLAR+LFG++N+ + FGF  GLA+GGG+  S+WL+     E  +   S  S Y  F ++++ W+  G++ ++ +++ K +
Sbjct:   85 LRTLSLIASSMQLGLLLVAMGFSQSLVWLTYLGAIMTGTSFGVLYIAAITQLQHEFRDNPGAVTGVGMFSSSLGSIVLAFVYSICQEELTWLQSLIACGVSMFLANGAASLSLTSALEDEVQDEESVPLLSDQKPDNSVKLGIWEILRDPNMYFFLLT-FSAAV----GPGY---GTAVGFQ-QMSVDVFSLSSSESNRYFLLVTSLGLIGRLGAGFGGDILKTEKGVFSSGALNVTGLLLVLQSVAVLLMQSF--PTSFYAFVICSCITYFVFTGGAVTGALLARNLFGIANASLVFGF-TGLAVGGGDLLSSWLIKQHAGEVPSGDPSLLSSYGEFIYVSIFWTLAGVVALLFIRKSKKA 434          
The following BLAST results are available for this feature:
BLAST of Gchil5702.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
R7QK76_CHOCR6.620e-3452.14Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S2ZMJ0_9RHOD6.870e-1121.82Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 125..151
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 337..347
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..119
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 158..182
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 38..56
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 247..263
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 439..452
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..37
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 120..124
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 420..438
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 283..306
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 401..419
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 188..209
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 318..336
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 369..379
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 348..368
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 380..400
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 210..246
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..78
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 307..317
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 152..157
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 79..98
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 264..282
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 183..187
NoneNo IPR availableTMHMMTMhelixcoord: 421..438
NoneNo IPR availableTMHMMTMhelixcoord: 281..303
NoneNo IPR availableTMHMMTMhelixcoord: 246..268
NoneNo IPR availableTMHMMTMhelixcoord: 95..117
NoneNo IPR availableTMHMMTMhelixcoord: 158..180
NoneNo IPR availableTMHMMTMhelixcoord: 313..335
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 58..80
NoneNo IPR availableTMHMMTMhelixcoord: 187..209
NoneNo IPR availableTMHMMTMhelixcoord: 124..143
NoneNo IPR availableTMHMMTMhelixcoord: 379..401
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 13..445

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000015_piloncontigtig00000015_pilon:929790..931246 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5702.t1Gchil5702.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000015_pilon 929790..931246 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5702.t1 ID=Gchil5702.t1|Name=Gchil5702.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=453bp
MATDSPHSHPSAPLLHGSLAILLLLLAGSTFSLGLFIPGVEAAAKPGQHL
DGIWETAMGAMHFLSGPIMILCSLYLDAGVESSSRLVPLSRTKNFRLRVV
NLICVVAFASFSISASGAAHSNRVALFSGVAVQAFPLAILFLTCMQALLV
WYPHRSGLAIGLGHAAFGAGTVITTELFSLVLTRTDPVFAIYTASAILST
SAFFPAMFMRWPSENEISKQEEENCLLERLEAIERIPVSHIIRLPNFWLY
IFTIFSTSVTYMLNPYYFKLGHLFGRPLDKLVLYFNISNIASTLCSLFVS
TLTDFVRSNTGFFFSGSKNIMFFLMFVQTICLYLSINVNNTQNFSGFVVL
KATMKIIEMSHVGCAALLARDLFGLSNSCIAFGFGAGLALGGGEAASAWL
MGTVEALARPISAPSDYNPFYWIAVVWSTMGLICVMAVQRHKNSHKYEQM
FP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf