Gchil5687.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5687.t1
Unique NameGchil5687.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length257
Homology
BLAST of Gchil5687.t1 vs. uniprot
Match: A0A2V3IVX8_9FLOR (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVX8_9FLOR)

HSP 1 Score: 314 bits (805), Expect = 3.870e-106
Identity = 157/203 (77.34%), Postives = 181/203 (89.16%), Query Frame = 0
Query:   55 MSEPFSSSDEQFAP-NDEPDSPPPLSRNPIFHDNQNPLQRAMMWPPVNPNQPPIWLRRMNNASETCVFKAGISAFAGGGLGVLFGLFFGGYSNAVDKAVETEGPASLKLRVGFKEAARSMRSYAKNFAWFGASFSAAECTVEKIRARHDIWNSVIGGCVAGAFMSSSPSDKMTPRARAMQMAFGCASVGAFSAAIDYYMEYMD 256
            MS+  +SS ++F   ++  D  PPLS+NPIF+D +NPLQ+ M+WPP+NPNQPP+W+R +NNA+ETC+FKA +SA AGGGLGVLFGLFFGGYSNAVDKAVETEGPASLKLRVGFKEAARSMRSYAKNFA FGASFS +ECTVEK+RARHDIWNSVIGGC AGAFMSS+PS+++  RARA QMAFGCASV AFSAAIDYYMEYMD
Sbjct:    1 MSDNDASSAQRFDNFSNSADEAPPLSQNPIFND-RNPLQQPMVWPPLNPNQPPLWIRTINNATETCIFKASMSAVAGGGLGVLFGLFFGGYSNAVDKAVETEGPASLKLRVGFKEAARSMRSYAKNFAMFGASFSVSECTVEKLRARHDIWNSVIGGCAAGAFMSSAPSERIPHRARAAQMAFGCASVAAFSAAIDYYMEYMD 202          
BLAST of Gchil5687.t1 vs. uniprot
Match: A0A5J4Z0J1_PORPP (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0J1_PORPP)

HSP 1 Score: 165 bits (418), Expect = 1.020e-47
Identity = 79/142 (55.63%), Postives = 102/142 (71.83%), Query Frame = 0
Query:  112 MNNASETCVFKAGISAFAGGGLGVLFGLFFGGYSNAVDKAVETEGPASLKLRVGFKEAARSMRSYAKNFAWFGASFSAAECTVEKIRARHDIWNSVIGGCVAGAFMSSSPSDKMTPRARAMQMAFGCASVGAFSAAIDYYME 253
            +N   E+C FKA +S  AGGG+G+ FGL FGGY+ AVD+AVE++G    + RVGFK A R+M SYAK+FA +GA FS++EC +E  RARHDIWNSV  GCV GA ++S+P   +  +AR  QMA  CA + AFS AID YM+
Sbjct:   42 LNAVGESCAFKALLSTVAGGGIGLFFGLLFGGYAQAVDEAVESKGTTVQRFRVGFKSAGRAMGSYAKSFAIWGAVFSSSECAIESYRARHDIWNSVAAGCVTGATLASAPKQSIGAKARIQQMAVACAGMAAFSGAIDLYMD 183          
BLAST of Gchil5687.t1 vs. uniprot
Match: M1VHJ2_CYAM1 (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VHJ2_CYAM1)

HSP 1 Score: 152 bits (385), Expect = 9.170e-43
Identity = 82/179 (45.81%), Postives = 112/179 (62.57%), Query Frame = 0
Query:   77 PLSRNPIFHDNQNP-LQRAMMWPPVNPNQPPIWLRRMNNASETCVFKAGISAFAGGGLGVLFGLFFGGYSNAVDKAVETEGPASLKLRVGFKEAARSMRSYAKNFAWFGASFSAAECTVEKIRARHDIWNSVIGGCVAGAFMSSSPSDKMTPRARAMQMAFGCASVGAFSAAIDYYMEY 254
            P+SR     D   P L   + +P  NP++     +      E+C FKA  +A AGGGLGV  GLF GG+S  +D+AVE + P   +LR   K  A  +R+Y+KNFA +GA+++ AEC+VEK RARHD+WNS+I GC  GA ++S P   M+ R R  QM+ GC  V AFS AIDY++E+
Sbjct:    7 PVSRKSEEADVVKPRLPPNLQFPERNPSE-----KFAEMVLESCAFKAVAAAIAGGGLGVALGLFIGGFSAELDRAVEAQSPWREQLRAYGKALAAQIRTYSKNFALWGATYTIAECSVEKYRARHDLWNSLIAGCATGAVLASQPRASMSARTRGQQMSVGCLGVAAFSCAIDYWLEH 180          
BLAST of Gchil5687.t1 vs. uniprot
Match: A0A7J7IQZ2_9RHOD (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IQZ2_9RHOD)

HSP 1 Score: 150 bits (379), Expect = 7.310e-42
Identity = 70/138 (50.72%), Postives = 97/138 (70.29%), Query Frame = 0
Query:  117 ETCVFKAGISAFAGGGLGVLFGLFFGGYSNAVDKAVETEGPASLKLRVGFKEAARSMRSYAKNFAWFGASFSAAECTVEKIRARHDIWNSVIGGCVAGAFMSSSPSDKMTPRARAMQMAFGCASVGAFSAAIDYYMEY 254
            E+C FKA  +A AGGGLGV  GLF GG+S  +D+ VE + P   +LR   +  A  +R+Y+KNFA +GA+++  EC+VEK RARHD+WNS+I GC+ GA ++S P  +M+ R R  QM+ GC  V AFS AIDY++E+
Sbjct:   43 ESCAFKAAAAAIAGGGLGVALGLFVGGFSTELDRTVEAQAPWRQQLRAYGRALAAQIRTYSKNFALWGATYTITECSVEKYRARHDLWNSLIAGCMTGAVLASQPRTQMSLRTRGQQMSVGCLGVAAFSCAIDYWLEH 180          
BLAST of Gchil5687.t1 vs. uniprot
Match: A0A1X6NRT5_PORUM (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NRT5_PORUM)

HSP 1 Score: 147 bits (372), Expect = 1.640e-41
Identity = 73/125 (58.40%), Postives = 90/125 (72.00%), Query Frame = 0
Query:  130 GGGLGVLFGLFFGGYSNAVDKAVETEGPASLKLRVGFKEAARSMRSYAKNFAWFGASFSAAECTVEKIRARHDIWNSVIGGCVAGAFMSSSPSDKMTP-RARAMQMAFGCASVGAFSAAIDYYME 253
            GGGLG+  GL FGGY++ VD+AVE +GP   KLRVGF  A  SM  Y+++FA  GA F+  +C VEK RARHD+WNS++GGC AGA +SS+P  +  P RARA  MA GCA   AFS AIDY+ME
Sbjct:    2 GGGLGLFAGLLFGGYASGVDRAVEMKGPMRAKLRVGFAAAGTSMAEYSRSFARLGAVFALCDCAVEKARARHDLWNSLLGGCAAGAALSSAPRTRGVPARARAGNMALGCAGFAAFSTAIDYWME 126          
BLAST of Gchil5687.t1 vs. uniprot
Match: R7QDQ1_CHOCR (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDQ1_CHOCR)

HSP 1 Score: 127 bits (318), Expect = 5.400e-34
Identity = 60/84 (71.43%), Postives = 66/84 (78.57%), Query Frame = 0
Query:  173 MRSYAKNFAWFGASFSAAECTVEKIRARHDIWNSVIGGCVAGAFMSSSPSDKMTPRARAMQMAFGCASVGAFSAAIDYYMEYMD 256
            M SYAK+FA FG  FS AECTVEK+RARHDIWNS+IGGCV GA MSS P   +  RARA QMA GC  + AFSAAIDYYMEYM+
Sbjct:    1 MSSYAKSFAMFGLVFSGAECTVEKVRARHDIWNSIIGGCVTGAVMSSQPRQSIPHRARASQMAVGCGGMAAFSAAIDYYMEYME 84          
BLAST of Gchil5687.t1 vs. uniprot
Match: M2XRN2_GALSU (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XRN2_GALSU)

HSP 1 Score: 110 bits (274), Expect = 2.410e-26
Identity = 55/145 (37.93%), Postives = 80/145 (55.17%), Query Frame = 0
Query:  112 MNNASETCVFKAGISAFAGGGLGVLFGLFFGGYSNAVDKAVETEGPASLKLRVGFKEAARSMRSYAKNFAWFGASFSAAECTVEKIRARHDIWNSVIGGCVAGAFMSSSPSDKMTPRARAMQMAFGCASVGAFSAAIDYYMEYMD 256
            +  A E+C+FK+ +S  A                   D AVET+G A  KL  G + A  +    AK FA +G  +S  EC +EK RA+HD+WNS++ GC+ G  ++S P   M  +ARA QM+ GC  V  FS A+DY++E+ +
Sbjct:   26 IEKAMESCLFKSMMSGVAXXXXXXXXXXXXXXXXXXXDTAVETQGTAKQKLLAGGRVAKNACVRQAKTFALWGTVYSGTECAIEKYRAKHDLWNSLVAGCITGGVLTSQPKIPMGAKARATQMSVGCGGVAMFSLALDYFLEHRE 170          
BLAST of Gchil5687.t1 vs. uniprot
Match: A0A0G4IP81_PLABS (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IP81_PLABS)

HSP 1 Score: 107 bits (268), Expect = 1.350e-25
Identity = 60/141 (42.55%), Postives = 83/141 (58.87%), Query Frame = 0
Query:  114 NASETCVFKAGISAFAGGGLGVLFGLFFGGYSNAVDKAVETEGPAS-LKLRVGFKEAARSMRSYAKNFAWFGASFSAAECTVEKIRARHDIWNSVIGGCVAGAFMSSSPSDKMTPRARAMQMAFGCASVGAFSAAIDYYME 253
            NA E C  K   S  AGG +G++FGL  G + +++  + E +   S  K+R+  K+     +S+ KNFA  G  +SA EC +EK RA+HD++N  + GCV GA +S+    K  P+A    M FGCA   AFSAAID YME
Sbjct:   25 NAMENCAVKGVFSGLAGGAMGLVFGLMMGSFDHSMSMSEEYQAADSRTKIRMTMKDMVAKSKSWGKNFAVVGLIYSATECFIEKQRAKHDLYNVAMAGCVTGAALSA----KSGPQA----MLFGCAGFAAFSAAIDAYME 157          
BLAST of Gchil5687.t1 vs. uniprot
Match: A0A3B6JLD1_WHEAT (Uncharacterized protein n=13 Tax=Triticeae TaxID=147389 RepID=A0A3B6JLD1_WHEAT)

HSP 1 Score: 98.2 bits (243), Expect = 9.790e-22
Identity = 59/142 (41.55%), Postives = 76/142 (53.52%), Query Frame = 0
Query:  112 MNNASETCVFKAGISAFAGGGLGVLFGLFFGGYSNAVDKAVETEGPASLKLRVGFKEAARSMRSYAKNFAWFGASFSAAECTVEKIRARHDIWNSVIGGCVAGAFMSSSPSDKMTPRARAMQMAFGCASVGAFSAAIDYYME 253
            MNN    C  ++ +S   GGGLGVL GLFFG   N +   +  E  A  ++    K+  R   S+AK FA  G  FSAAEC VEK RA+HDI NS + GCV G  +++    + T          GC   GAFS AI+ +ME
Sbjct:   44 MNN----CAVRSVLSGVMGGGLGVLMGLFFGALENPI---MAEEMTARQQIVYQAKQMGRKSMSHAKTFAVMGLIFSAAECVVEKARAKHDITNSAVAGCVTGGALAAKGGPQAT--------CIGCVGFGAFSVAIEKFME 170          
BLAST of Gchil5687.t1 vs. uniprot
Match: A0A0U5CNT4_ASPCI (Mitochondrial import inner membrane translocase subunit TIM22 n=4 Tax=Aspergillus TaxID=5052 RepID=A0A0U5CNT4_ASPCI)

HSP 1 Score: 97.8 bits (242), Expect = 1.680e-21
Identity = 62/151 (41.06%), Postives = 81/151 (53.64%), Query Frame = 0
Query:  109 LRRMNNASETCVFKAGISAFAGGGLGVLFGLFFGGYSNAVDKAVETEGPASLKL------RVGFKEAARSMRSYAKNFAWFGASFSAAECTVEKIRARHDIWNSVIGGCVAGAFMSSSPSDKMTPRARAMQMAFGCASVGAFSAAIDYYME 253
            ++ M  A E+C FK  +S   G GLG +FGLF    S + D +   +G A   L      R GFK+      S AKNF   GA +S  EC VE +RA++D+ NSV+ GC+ G  + +    K  P+A A    FGCA   AFSAAID YM 
Sbjct:   36 VKMMQKAMESCPFKTVLSGTMGFGLGGIFGLFMA--SMSYDSSFTPQGKAIADLPWRQQVRTGFKDMGARSWSSAKNFGIVGALYSGTECCVEGLRAKNDLTNSVVSGCITGGILGA----KAGPQAAA----FGCAGFAAFSAAIDAYMR 176          
The following BLAST results are available for this feature:
BLAST of Gchil5687.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVX8_9FLOR3.870e-10677.34Mitochondrial import inner membrane translocase su... [more]
A0A5J4Z0J1_PORPP1.020e-4755.63Mitochondrial import inner membrane translocase su... [more]
M1VHJ2_CYAM19.170e-4345.81Mitochondrial import inner membrane translocase su... [more]
A0A7J7IQZ2_9RHOD7.310e-4250.72Mitochondrial import inner membrane translocase su... [more]
A0A1X6NRT5_PORUM1.640e-4158.40Mitochondrial import inner membrane translocase su... [more]
R7QDQ1_CHOCR5.400e-3471.43Mitochondrial import inner membrane translocase su... [more]
M2XRN2_GALSU2.410e-2637.93Mitochondrial import inner membrane translocase su... [more]
A0A0G4IP81_PLABS1.350e-2542.55Mitochondrial import inner membrane translocase su... [more]
A0A3B6JLD1_WHEAT9.790e-2241.55Uncharacterized protein n=13 Tax=Triticeae TaxID=1... [more]
A0A0U5CNT4_ASPCI1.680e-2141.06Mitochondrial import inner membrane translocase su... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02466Tim17coord: 119..245
e-value: 6.3E-25
score: 87.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..68
NoneNo IPR availablePANTHERPTHR14110:SF0MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22coord: 110..254
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 253..256
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 119..141
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 220..230
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..118
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 142..202
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 231..252
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 203..219
NoneNo IPR availableTMHMMTMhelixcoord: 119..141
NoneNo IPR availableTMHMMTMhelixcoord: 231..248
IPR039175Mitochondrial import inner membrane translocase subunit TIM22PANTHERPTHR14110MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22coord: 110..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000015_piloncontigtig00000015_pilon:758904..759674 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5687.t1Gchil5687.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000015_pilon 758904..759674 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5687.t1 ID=Gchil5687.t1|Name=Gchil5687.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=257bp
MDACIQWPSGAPQTTAVFPRVIQFYGYQSQSPQLNPVAFVAFICSSDINT
HDGTMSEPFSSSDEQFAPNDEPDSPPPLSRNPIFHDNQNPLQRAMMWPPV
NPNQPPIWLRRMNNASETCVFKAGISAFAGGGLGVLFGLFFGGYSNAVDK
AVETEGPASLKLRVGFKEAARSMRSYAKNFAWFGASFSAAECTVEKIRAR
HDIWNSVIGGCVAGAFMSSSPSDKMTPRARAMQMAFGCASVGAFSAAIDY
YMEYMD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039175TIM22