Gchil5674.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5674.t1
Unique NameGchil5674.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length308
Homology
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BLAST of Gchil5674.t1 vs. uniprot
Match: A0A2V3IFQ1_9FLOR (RNase NYN domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFQ1_9FLOR)

HSP 1 Score: 124 bits (311), Expect = 3.570e-30
Identity = 65/137 (47.45%), Postives = 86/137 (62.77%), Query Frame = 0 
Query:  163 FSTVVDGLDVAYFHHRKHFRSVNVVRALKFLHKKDKKPVAFIPYTYVDFRCKNPTLADDPCVLKTIEAHGLVHFAKDSKHYAWHMLTFAKQRGCQIVSNRRYEVKRKVRIPPDVQVSPEELNELFEYVEHNRVPYKF 299
            +  V+DG +V  FH  K FRSVNVVRALK+ HK+  KP+AF+P   VDFR +   LADDPCVLK +E HGLV F  D   + WH++ +A QR   +VSNR+Y+   +  IPP      E  +E+ + VE  RV + F
Sbjct:  125 YDIVIDGENVGNFHGSKRFRSVNVVRALKYYHKQGLKPLAFVPRRCVDFRFQENRLADDPCVLKLLEEHGLVCFIVDELEFHWHVVEYAAQRDIPLVSNRKYKPSGECDIPP------ERHDEVLDAVESQRVLFTF 255
The following BLAST results are available for this feature:
BLAST of Gchil5674.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IFQ1_9FLOR3.570e-3047.45RNase NYN domain-containing protein n=1 Tax=Gracil... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11980coord: 164..307
e-value: 1.4E-12
score: 49.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..143
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..111
IPR021869Ribonuclease Zc3h12a-like, NYN domainPFAMPF11977RNase_Zc3h12acoord: 166..301
e-value: 9.7E-10
score: 38.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000015_piloncontigtig00000015_pilon:650797..651720 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5674.t1Gchil5674.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000015_pilon 650797..651720 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5674.t1 ID=Gchil5674.t1|Name=Gchil5674.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=308bp
MDHKRTRKLAAACAKCCANRHLPKCAHCRMYMCKLVCKSAATRRASHHSA
SQQAAPASKPSSQPSPRSGPQSASPPDSTPPKAVQPAAQPTTTSVKSAHS
PKSAPKPASNNNSVPSPAPQPNPATPSDTQQLDQTMPNIEAEQDDGFTPL
CYPLVECASNSSFSTVVDGLDVAYFHHRKHFRSVNVVRALKFLHKKDKKP
VAFIPYTYVDFRCKNPTLADDPCVLKTIEAHGLVHFAKDSKHYAWHMLTF
AKQRGCQIVSNRRYEVKRKVRIPPDVQVSPEELNELFEYVEHNRVPYKFR
GQFATKE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021869RNase_Zc3h12_NYN