Gchil5644.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5644.t1
Unique NameGchil5644.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length514
Homology
BLAST of Gchil5644.t1 vs. uniprot
Match: A0A2V3IV75_9FLOR (Vesicle-associated protein 2-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV75_9FLOR)

HSP 1 Score: 196 bits (499), Expect = 8.000e-54
Identity = 215/515 (41.75%), Postives = 268/515 (52.04%), Query Frame = 0
Query:    1 MERLVSVSPLHLSFQITLHKLTYTHINITNTSSSPVTYKVKTTNLKRYCVRPNAAILQPTQNIAIEISQQAFKTFPEDIDQCSDRFLLMVIPLQQIPLGPSSDADKVSRFHGYDSVMDIWNDVHEENVFKKKMTVSLQVSTENDIYASEPVPKPAPV--PFATEKPATHSGTFPENQKPSEQTYTDSSSAESLVHAQSPTAQPPQAPPVQEFSMTPKAGPTLQPPPKCQFPPQLRPIHQSPSPSQSKGDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPSPXXXXXXXXXXXXXLXXXXXXGRDLSXXXXXLVPISSRAPEPAVHETQTEKMLTADTTDARTQASASTPPGQPQLDPAPKQKETSKPPTPTAQQGREGMDQVAAASEKAVELYYLSPEFERKRVLEMRTAPKITVPKLLERTRQRIANERAGQIAKAIEDRQRKIDGVKLELREARHRLSDARMATSPAYDVAYEISENSRVPFAQIVIMAIISGALLQLLV 513
            M+RLV+ SP +L+FQI L+K T T +N+TN S  PV YKVKTTNLKRYCVRPNAA+L+P+Q+I I+I QQAFK+ P D++ C DRFLLMV  L+ +P  PS+ A   +  HG  S+ ++W  +  + V KKKM V+LQ+    D Y  + +  P  +  P  T+ PA    + PE Q  +             +H       PP  P  +E S               +  P        P+  Q+    XXXXXXXXXXXXXXXXXXXX                    P +PXXXXXXXXXXXXX XXXX      SXXXXX                              ++A +S P                   TPT                            ER+RV  MR APKI + KL +  RQRIA ERA Q++  I  RQ  ID +KLELREARHRLSDARMAT+PAYDV YE ++N+ +PFAQI IMA+IS ALLQLLV
Sbjct:    1 MDRLVTFSPHNLTFQIRLNKQTSTLVNMTNISEHPVAYKVKTTNLKRYCVRPNAAVLKPSQSITIQIDQQAFKSIPPDLNSCPDRFLLMVASLKTLP-QPSNPATDDNSVHGLASITELWKSIPSDFVLKKKMVVNLQML---DSYPQKQIDTPQELLQPTPTQPPAA---SQPEQQPLN-------------IH-------PPTQPITKEPSPXXXXXXXXXXXAPIRHAPXXXXXXXLPAKPQAXXXXXXXXXXXXXXXXXXXXXXXXQ-------------------PSAPXXXXXXXXXXXXXXXXXXTTPAQPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEAPSSQP-------------------TPT------------------------DTYSERERVTLMRIAPKIKLQKLQKSARQRIAIERAAQLSAIITQRQSDIDAMKLELREARHRLSDARMATTPAYDVKYETNDNASLPFAQIFIMAVISSALLQLLV 426          
BLAST of Gchil5644.t1 vs. uniprot
Match: R7Q5X8_CHOCR (MSP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5X8_CHOCR)

HSP 1 Score: 121 bits (304), Expect = 5.530e-27
Identity = 70/114 (61.40%), Postives = 86/114 (75.44%), Query Frame = 0
Query:  399 KAVELYYLSPEFERKRVLEMRTAPKITVPKLLERTRQRIANERAGQIAKAIEDRQRKIDGVKLELREARHRLSDARMATSPAYDVAYEISENSRVPFAQIVIMAIISGALLQLL 512
            KA E  Y S  + R+RVL +R APK++ P L   TRQR+A ERAG++ + I  R+  ID +K EL EARH+LSDA MAT PAYDV YE++E+SRVPFAQI IMA+ISGALLQLL
Sbjct:  227 KASEPDYKSVAWARERVLGVRPAPKVSPPPLDRSTRQRVAVERAGELVRVINMRKGDIDTLKSELAEARHKLSDAHMATRPAYDVRYEVNESSRVPFAQICIMAVISGALLQLL 340          
BLAST of Gchil5644.t1 vs. uniprot
Match: A0A1E4RTP5_9ASCO (Major sperm protein (Fragment) n=1 Tax=Hyphopichia burtonii NRRL Y-1933 TaxID=984485 RepID=A0A1E4RTP5_9ASCO)

HSP 1 Score: 79.7 bits (195), Expect = 3.030e-14
Identity = 51/144 (35.42%), Postives = 84/144 (58.33%), Query Frame = 0
Query:    5 VSVSPLHLSFQITLHKLTYTHINITNTSSSPVTYKVKTTNLKRYCVRPNAAILQPTQNIAIEISQQAF-KTFPEDIDQCSDRFLLMVIPLQQIPLGPSSDADKVSRFHGYDSVMDIWNDV---HEENVFKKKMTVSLQVSTEND 144
            + V P  L F+ T  K +  ++ +TNTSSSP+ +KVKTT  K YCVRPNA++++P  ++ I I  Q F +  P+D  +C D+FL++ +P  ++      DA KV          +IW+ +   ++E +  KK+ V+  V T++D
Sbjct:    1 MEVQPSVLEFKGTFTKQSTEYLTLTNTSSSPLAFKVKTTAPKLYCVRPNASVVEPNDSVKISIILQGFAQPLPKDF-KCKDKFLIVSLPCPEL-----EDAQKVG---------EIWSSLEAKYKEQLVSKKLRVNY-VITDSD 128          
BLAST of Gchil5644.t1 vs. uniprot
Match: A0A0A0KMX3_CUCSA (MSP domain-containing protein n=8 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0KMX3_CUCSA)

HSP 1 Score: 79.0 bits (193), Expect = 6.450e-13
Identity = 57/171 (33.33%), Postives = 85/171 (49.71%), Query Frame = 0
Query:    4 LVSVSPLHLSFQITLHKLTYTHINITNTSSSPVTYKVKTTNLKRYCVRPNAAILQPTQNIAIEISQQAFKTFPEDIDQCSDRFLLMVIPLQQIPLGPSSDADKVSRFHGYDSVMDIWNDVHEENVFKKKMTVSLQVSTENDIYASEPVPKPAPVPFATEKPATHSGTFPEN 174
            L+S+ PL L F   L K     + ++N + S V +KVKTTN K+YCVRPN  I+ P     + ++ QA K  P D+ QC D+FLL  +           +A+  ++  G+         V EE  FK K+           +Y S P P P+PVP  +E+ ++  G+  EN
Sbjct:    6 LLSIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVSPRSTCDVIVTMQAQKEAPSDM-QCKDKFLLQSVKTVDGATAKDINAEMFNKEAGH---------VVEE--FKLKV-----------VYVSPPQP-PSPVPEGSEEGSSPRGSVSEN 152          
BLAST of Gchil5644.t1 vs. uniprot
Match: A0A0A0L5E3_CUCSA (MSP domain-containing protein n=12 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0L5E3_CUCSA)

HSP 1 Score: 77.8 bits (190), Expect = 1.020e-12
Identity = 41/106 (38.68%), Postives = 64/106 (60.38%), Query Frame = 0
Query:    2 ERLVSVSPLHLSFQITLHKLTYTHINITNTSSSPVTYKVKTTNLKRYCVRPNAAILQPTQNIAIEISQQAFKTFPEDIDQCSDRFLLMVIPLQQIPLGPSSDADKV 107
             RL+SV P  L FQI L K ++  + + N +   V +KVKTT+ K+Y VRPN  ++QP  +  I ++ QA + +P D+ QC D+FLL     Q   + P++D D++
Sbjct:    7 NRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQAMREYPADM-QCKDKFLL-----QSTIVPPNTDVDEL 106          
BLAST of Gchil5644.t1 vs. uniprot
Match: A0A4P1QSK3_LUPAN (MSP domain-containing protein n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=A0A4P1QSK3_LUPAN)

HSP 1 Score: 78.2 bits (191), Expect = 1.180e-12
Identity = 56/171 (32.75%), Postives = 85/171 (49.71%), Query Frame = 0
Query:    4 LVSVSPLHLSFQITLHKLTYTHINITNTSSSPVTYKVKTTNLKRYCVRPNAAILQPTQNIAIEISQQAFKTFPEDIDQCSDRFLLMVIPLQQIPLGPSSDADKVSRFHGYDSVMDIWNDVHEENVFKKKMTVSLQVSTENDIYASEPVPKPAPVPFATEKPATHSGTFPEN 174
            L+S+ PL L+F   L K     + ++N + S V +KVKTTN K+YCVRPN  I+ P     + ++ QA K  P D+ QC D+FLL     Q +     +    +S         D++N      V + K+ V         +Y S P P P+PVP  +E+ ++  G+  EN
Sbjct:    6 LLSIEPLELNFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVMPRSTCDVMVTMQAQKEAPPDM-QCKDKFLL-----QSVKTNDGASPKDISA--------DMFNKEAGHVVEECKLRV---------VYVSPPQP-PSPVPEGSEEGSSPRGSISEN 152          
BLAST of Gchil5644.t1 vs. uniprot
Match: A0A2C9WL38_MANES (MSP domain-containing protein n=5 Tax=Euphorbiaceae TaxID=3977 RepID=A0A2C9WL38_MANES)

HSP 1 Score: 78.2 bits (191), Expect = 1.180e-12
Identity = 55/171 (32.16%), Postives = 84/171 (49.12%), Query Frame = 0
Query:    4 LVSVSPLHLSFQITLHKLTYTHINITNTSSSPVTYKVKTTNLKRYCVRPNAAILQPTQNIAIEISQQAFKTFPEDIDQCSDRFLLMVIPLQQIPLGPSSDADKVSRFHGYDSVMDIWNDVHEENVFKKKMTVSLQVSTENDIYASEPVPKPAPVPFATEKPATHSGTFPEN 174
            ++S+ PL L F   L K     + ++N + S V +KVKTTN K+YCVRPNA I+ P     + ++ QA K  P D+ QC D+FLL  +                 R H   +V DI        +F K+    ++      +Y S P P P+PVP  +E+ ++  G+  +N
Sbjct:    6 ILSIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNAGIVLPRSTCDVIVTMQAQKELPADM-QCKDKFLLQSV-----------------RTHDGATVKDI-----NAEMFNKEAGHVVEECKLRVLYVSPPQP-PSPVPEGSEEGSSPRGSVSDN 152          
BLAST of Gchil5644.t1 vs. uniprot
Match: A0A484KFP2_9ASTE (MSP domain-containing protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484KFP2_9ASTE)

HSP 1 Score: 77.4 bits (189), Expect = 1.820e-12
Identity = 56/182 (30.77%), Postives = 88/182 (48.35%), Query Frame = 0
Query:    4 LVSVSPLHLSFQITLHKLTYTHINITNTSSSPVTYKVKTTNLKRYCVRPNAAILQPTQNIAIEISQQAFKTFPEDIDQCSDRFLLMVIPLQQIPLGPSSDADKVSRFHGYDSVMDIWNDVHEENVFKKKMTVSLQVSTENDIYASEPVPKPAPVPFATEKPATHSGTFPENQKPSEQTYTDS 185
            L+ + PL L F   L K     I ++N S + V +KVKTTN K+YCVRPN  ++ P     I ++ QA K  P D+ QC D+FLL     Q +   P ++  ++S                   +F K+    ++      +Y S P P P+PV   +E+  + S T  EN   + ++++DS
Sbjct:    6 LLRIDPLDLKFPFELRKQISCSIQLSNGSENHVAFKVKTTNPKKYCVRPNTGLVLPRSTCDIIVTMQAQKEMPPDM-QCKDKFLL-----QSVIASPDTNPKEISS-----------------EMFNKEAGKLVEECKLKVVYVSPPQP-PSPVAEGSEEGLSQSPTLTENGFEAARSFSDS 163          
BLAST of Gchil5644.t1 vs. uniprot
Match: A0A4P1RG97_LUPAN (MSP domain-containing protein n=6 Tax=50 kb inversion clade TaxID=2231393 RepID=A0A4P1RG97_LUPAN)

HSP 1 Score: 77.4 bits (189), Expect = 2.170e-12
Identity = 58/171 (33.92%), Postives = 83/171 (48.54%), Query Frame = 0
Query:    4 LVSVSPLHLSFQITLHKLTYTHINITNTSSSPVTYKVKTTNLKRYCVRPNAAILQPTQNIAIEISQQAFKTFPEDIDQCSDRFLLMVIPLQQIPLGPSSDADKVSRFHGYDSVMDIWNDVHEENVFKKKMTVSLQVSTENDIYASEPVPKPAPVPFATEKPATHSGTFPEN 174
            L+SV PL L F   L K     + ++N + S V +KVKTTN K+YCVRPN  I+ P     I ++ QA K  P D+ QC D+FLL     Q +     +    +S         D++N      V   K+ V         +Y S P P P+PVP  +E+ ++  G+  EN
Sbjct:    6 LLSVEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVMPRSTCDIMVTMQAQKEAPPDM-QCKDKFLL-----QSVKTNDGASPKDISA--------DMFNKEAGHVVEDCKLRV---------VYVSPPQP-PSPVPEGSEEGSSPRGSVSEN 152          
BLAST of Gchil5644.t1 vs. uniprot
Match: A0A835M725_9MAGN (MSP domain-containing protein (Fragment) n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835M725_9MAGN)

HSP 1 Score: 77.4 bits (189), Expect = 3.370e-12
Identity = 54/171 (31.58%), Postives = 85/171 (49.71%), Query Frame = 0
Query:    4 LVSVSPLHLSFQITLHKLTYTHINITNTSSSPVTYKVKTTNLKRYCVRPNAAILQPTQNIAIEISQQAFKTFPEDIDQCSDRFLLMVIPLQQIPLGPSSDADKVSRFHGYDSVMDIWNDVHEENVFKKKMTVSLQVSTENDIYASEPVPKPAPVPFATEKPATHSGTFPEN 174
            L+ V P  L F + L K     + ++N + + + +KVKTTN K+YCVRPN  I+ P     + ++ QA + FP D+ QC D+FLL     Q +   P +    ++         D++N      V + K+ V         IY S P P P+PVP  +E+ ++  G+  EN
Sbjct:   37 LLRVDPQELKFPLELKKQVSCSLQLSNNTENYIAFKVKTTNPKKYCVRPNTGIVLPRSTSDVTVTMQAQREFPSDM-QCKDKFLL-----QSVTASPGTTPKDINA--------DMFNKESGNLVEECKLRV---------IYVSPPQP-PSPVPEGSEEGSSPRGSVSEN 183          
The following BLAST results are available for this feature:
BLAST of Gchil5644.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IV75_9FLOR8.000e-5441.75Vesicle-associated protein 2-2 n=1 Tax=Gracilariop... [more]
R7Q5X8_CHOCR5.530e-2761.40MSP domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A1E4RTP5_9ASCO3.030e-1435.42Major sperm protein (Fragment) n=1 Tax=Hyphopichia... [more]
A0A0A0KMX3_CUCSA6.450e-1333.33MSP domain-containing protein n=8 Tax=Cucurbitacea... [more]
A0A0A0L5E3_CUCSA1.020e-1238.68MSP domain-containing protein n=12 Tax=Cucurbitace... [more]
A0A4P1QSK3_LUPAN1.180e-1232.75MSP domain-containing protein n=1 Tax=Lupinus angu... [more]
A0A2C9WL38_MANES1.180e-1232.16MSP domain-containing protein n=5 Tax=Euphorbiacea... [more]
A0A484KFP2_9ASTE1.820e-1230.77MSP domain-containing protein n=3 Tax=Cuscuta sect... [more]
A0A4P1RG97_LUPAN2.170e-1233.92MSP domain-containing protein n=6 Tax=50 kb invers... [more]
A0A835M725_9MAGN3.370e-1231.58MSP domain-containing protein (Fragment) n=1 Tax=C... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 449..469
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 341..362
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..395
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 244..328
NoneNo IPR availablePANTHERPTHR10809:SF45VESICLE-ASSOCIATED PROTEIN 2-2coord: 1..471
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 513..513
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..494
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 495..512
IPR000535Major sperm protein (MSP) domainPFAMPF00635Motile_Spermcoord: 6..93
e-value: 6.0E-19
score: 67.9
IPR000535Major sperm protein (MSP) domainPROSITEPS50202MSPcoord: 4..138
score: 21.728323
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 1..142
e-value: 7.3E-25
score: 89.3
IPR016763Vesicle-associated membrane-protein-associated proteinPANTHERPTHR10809VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEINcoord: 1..471
IPR008962PapD-like superfamilySUPERFAMILY49354PapD-likecoord: 2..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000015_piloncontigtig00000015_pilon:414473..416014 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5644.t1Gchil5644.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000015_pilon 414473..416014 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5644.t1 ID=Gchil5644.t1|Name=Gchil5644.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=514bp
MERLVSVSPLHLSFQITLHKLTYTHINITNTSSSPVTYKVKTTNLKRYCV
RPNAAILQPTQNIAIEISQQAFKTFPEDIDQCSDRFLLMVIPLQQIPLGP
SSDADKVSRFHGYDSVMDIWNDVHEENVFKKKMTVSLQVSTENDIYASEP
VPKPAPVPFATEKPATHSGTFPENQKPSEQTYTDSSSAESLVHAQSPTAQ
PPQAPPVQEFSMTPKAGPTLQPPPKCQFPPQLRPIHQSPSPSQSKGDTPP
PPIPKRENPPPQPPKRDAPPPPLPPKRDAPPPLPPKRVPPSPPPPPSRRA
PPPPPLPPPPPPGRDLSPPPPPLVPISSRAPEPAVHETQTEKMLTADTTD
ARTQASASTPPGQPQLDPAPKQKETSKPPTPTAQQGREGMDQVAAASEKA
VELYYLSPEFERKRVLEMRTAPKITVPKLLERTRQRIANERAGQIAKAIE
DRQRKIDGVKLELREARHRLSDARMATSPAYDVAYEISENSRVPFAQIVI
MAIISGALLQLLV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000535MSP_dom
IPR013783Ig-like_fold
IPR016763VAP
IPR008962PapD-like_sf