Gchil5641.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5641.t1
Unique NameGchil5641.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length241
Homology
BLAST of Gchil5641.t1 vs. uniprot
Match: A0A2V3J3W8_9FLOR (Glycolipid transfer protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3W8_9FLOR)

HSP 1 Score: 332 bits (852), Expect = 6.340e-113
Identity = 160/226 (70.80%), Postives = 193/226 (85.40%), Query Frame = 0
Query:   13 TSSTVTVDTEAIHTPFSCITQPFYHAIHDADNKNLCFPKGDINVELFNSAVSGFLAIFDALGCPIITEIVRRDFRGKTNGLRNSSRRLRANTLRELVRNEIKSPPRFWAASGIDCLLWCQRILNFIEQLVQHLVDDHHMELKQACILSYRNTLALRHPNVTKAIFEKALQLVPPRKQFVTNLCEGDQEASDQDVTLCLVGMKDFLKAVRPHITALQTLFEIEQIED 238
            T+ST+TV T+AIHTPFSCI  PFYHAIH+A +    F KGDINV+++N+A++ FL IFDALG PIITEIVRRDFR KTNGLRNS+RRLRA+TLR+LV NE+KSPPRFWA SGI  LLW QRIL+FI+++VQ LVDD   ELK+ACI++YR TLALRHP++TK IFE+ALQLVPPRKQF+TNLC+ +   SD+D+ LCLVGM+DFL A RPH +AL TLFE+EQIED
Sbjct:   17 TTSTLTVTTDAIHTPFSCINHPFYHAIHEAHSNQRSFQKGDINVDIYNTAITAFLTIFDALGSPIITEIVRRDFRAKTNGLRNSARRLRAHTLRQLVVNELKSPPRFWAPSGIQSLLWSQRILHFIQRMVQLLVDDAQRELKEACIMAYRETLALRHPHMTKVIFERALQLVPPRKQFLTNLCDSEC-LSDEDIKLCLVGMEDFLNATRPHTSALATLFEMEQIED 241          
BLAST of Gchil5641.t1 vs. uniprot
Match: V4AA68_LOTGI (Pleckstrin homology domain-containing family A member 8 n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4AA68_LOTGI)

HSP 1 Score: 62.0 bits (149), Expect = 1.660e-7
Identity = 55/178 (30.90%), Postives = 82/178 (46.07%), Query Frame = 0
Query:   24 IHTPFSCITQPFYHAIHDADNKNLCFPKGDINVELFNSAVSGFLAIF-DALGCPIITEIVRRDFRGKTNGLRN--SSRRLRANTLRELVRNEIKSPPRFWAASGIDCLLWCQRILNFIEQLVQHLVDDHHMELKQACILSYRNTLALRHPNVTKAIFEKALQLVPPRKQFVTNLCEGD 198
            I T FS + Q F         +++  P G I V LF  A    L +F D L        V+ DF G    +R   SS+     TL+ +V NEIK+     + S    +LW  R L FI ++++  V+   M+L +    +Y  TL   H  V + IF  A++ +P R  F+T+L   D
Sbjct:  291 IPTFFSTLNQSF-------TPEDVMSPDGII-VSLFLEACHNILPLFVDKLNSTAFAP-VKMDFTGNIRKIRQKYSSKPEEFTTLQRIVCNEIKANQHTSSNSATVAILWLNRGLEFIREILRE-VNSGEMDLSKCAYGAYDRTLKPYHGWVVRGIFAVAVKALPYRDDFLTHLAVTD 458          
The following BLAST results are available for this feature:
BLAST of Gchil5641.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J3W8_9FLOR6.340e-11370.80Glycolipid transfer protein n=1 Tax=Gracilariopsis... [more]
V4AA68_LOTGI1.660e-730.90Pleckstrin homology domain-containing family A mem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014830Glycolipid transfer protein domainPFAMPF08718GLTPcoord: 54..196
e-value: 1.2E-23
score: 84.0
IPR036497Glycolipid transfer protein superfamilyGENE3D1.10.3520.10Glycolipid transfer proteincoord: 34..240
e-value: 5.9E-35
score: 122.8
IPR036497Glycolipid transfer protein superfamilySUPERFAMILY110004Glycolipid transfer protein, GLTPcoord: 46..237
NoneNo IPR availablePANTHERPTHR10219GLYCOLIPID TRANSFER PROTEIN-RELATEDcoord: 40..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000015_piloncontigtig00000015_pilon:349600..350322 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5641.t1Gchil5641.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000015_pilon 349600..350322 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5641.t1 ID=Gchil5641.t1|Name=Gchil5641.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=241bp
MSTTPTKQHSAVTSSTVTVDTEAIHTPFSCITQPFYHAIHDADNKNLCFP
KGDINVELFNSAVSGFLAIFDALGCPIITEIVRRDFRGKTNGLRNSSRRL
RANTLRELVRNEIKSPPRFWAASGIDCLLWCQRILNFIEQLVQHLVDDHH
MELKQACILSYRNTLALRHPNVTKAIFEKALQLVPPRKQFVTNLCEGDQE
ASDQDVTLCLVGMKDFLKAVRPHITALQTLFEIEQIEDMR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014830Glycolipid_transfer_prot_dom
IPR036497GLTP_sf