Gchil5633.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5633.t1
Unique NameGchil5633.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length105
Homology
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BLAST of Gchil5633.t1 vs. uniprot
Match: A0A2V3J3U1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3U1_9FLOR)

HSP 1 Score: 110 bits (274), Expect = 2.850e-29
Identity = 66/94 (70.21%), Postives = 72/94 (76.60%), Query Frame = 0 
Query:   15 PLSPLSTFRVPFLSLNPALSSPPAMSLSRTRSLPITPVSD----FPSPVLRAPSELQSPSASLSDLDLAVEPLTHTQRVARATREFRDAWIVME 104
            P+SPLS FRVP LSLNPALSSPP+ SLSRTRSLPI+P S+     PSP L+A         SL+DLDL  E LTHTQRVARATREFRDAWIVME
Sbjct:   21 PMSPLSAFRVPMLSLNPALSSPPSFSLSRTRSLPISPSSEPRTPLPSPGLQA---------SLTDLDLP-ERLTHTQRVARATREFRDAWIVME 104
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BLAST of Gchil5633.t1 vs. uniprot
Match: R7Q435_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q435_CHOCR)

HSP 1 Score: 54.7 bits (130), Expect = 1.030e-7
Identity = 38/87 (43.68%), Postives = 41/87 (47.13%), Query Frame = 0 
Query:   18 PLSTFRVPFLSLNPALSSPPAMSLSRTRSLPITPVSDFPSPVLRAPSELQSPSASLSDLDLAVEPLTHTQRVARATREFRDAWIVME 104
            P S  R P L+LNP   S P +SLS       TP +  PSP L  P                    TH QRVARATREFRD WIV E
Sbjct:   20 PSSLLRSPLLALNPVFPSSPRLSLSDR-----TPSTPPPSPALNRP--------------------THVQRVARATREFRDVWIVPE 81
The following BLAST results are available for this feature:
BLAST of Gchil5633.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J3U1_9FLOR2.850e-2970.21Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q435_CHOCR1.030e-743.68Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000015_piloncontigtig00000015_pilon:268709..269023 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5633.t1Gchil5633.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000015_pilon 268709..269023 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5633.t1 ID=Gchil5633.t1|Name=Gchil5633.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=105bp
MSSSSSKPVSDAEQPLSPLSTFRVPFLSLNPALSSPPAMSLSRTRSLPIT
PVSDFPSPVLRAPSELQSPSASLSDLDLAVEPLTHTQRVARATREFRDAW
IVME*
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