Gchil562.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil562.t1
Unique NameGchil562.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length491
Homology
BLAST of Gchil562.t1 vs. uniprot
Match: A0A2V3IZN9_9FLOR (THO complex subunit 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZN9_9FLOR)

HSP 1 Score: 675 bits (1741), Expect = 4.500e-240
Identity = 327/469 (69.72%), Postives = 394/469 (84.01%), Query Frame = 0
Query:   14 VEQYLQTKDALDKVLREKLKDPPTELAEELIEQFPAFNFFPTLLLLLTEKLRSPSPFDALYVVDIGTSLSVKERLDQHAPVTFLHYVFSFITLDDIVANLDAIRKRISALPRTPRRQLYFIKLFQSAIERDTHGLNAVRSGRLRLMLAESLRAWHPSGMNRRGAYASHPIAYDPLPEGHVDAALYNALWGLQKFLQNPSLAETDRSWKEAASALDTVIAAFESTAVRSDTVPYGVDYPTSPNVLNLQLADTRFRRHMLVQYAIFLHHLETTASLATSEKDSQTLRQSVDFCATLFGRSGDGEKLKFRVLALLEKDEGNRLKRFVQSLFQRERVWLRWK-RTNYSHLETGVLKSPTVFKKRTVLWHQKDKTPGVNSWLQRIESLETQAENGDLYGALSDRSPVPGVEELVQALQEDFDESGLDEESKRKNDRKFKWRALRTLMDDDVGVLRQLSQSPQLDLDGVLHARTS 481
            +E+YL  K+AL  +L E+LKDPP E+ ++L++QFP  NF PTLL +LT  L++ SPFDAL+VVDI T LS K  LDQHAPVT LHYVFSF TLDD+VANL+AIRKRI+A+PRTP  QLYFIKLFQSAIERD HGLNAVRSGRLRL+LAESLRAWHPS MNRRG Y+ HPIAY+PLP+  VD+ALYNALWGLQKFLQNPSLAE ++SWKEA+ AL TVI+AFEST V+SDTVP GVDYPTSP VL+LQLAD  FRRHMLVQYAIFLHHLETT SL   EKD+ T+R++++FC  LF R+G+GE+LK RV+ALLEKD+G RLK F+QS  QRERVW+RWK RTNY HL+TG + SP+VFK+R V+WHQK+KT G+NSW+QRI++LE+Q + GDLY AL +R PVPG+ EL ++LQED DE GL+ E KRKNDR FKWRALRTLMD+DV  L++LS+SP  DLD +L  +++
Sbjct:   14 IEEYLTKKEALKALLTERLKDPPEEVTDDLLKQFPKANFLPTLLGILTSLLKTSSPFDALHVVDIATQLSAKGHLDQHAPVTLLHYVFSFATLDDLVANLEAIRKRITAIPRTPLLQLYFIKLFQSAIERDAHGLNAVRSGRLRLLLAESLRAWHPSAMNRRGTYSIHPIAYNPLPQNSVDSALYNALWGLQKFLQNPSLAEAEKSWKEASEALGTVISAFESTPVKSDTVPCGVDYPTSPGVLHLQLADNHFRRHMLVQYAIFLHHLETTGSLPVGEKDNPTIRKNIEFCGKLFARNGEGERLKARVIALLEKDDGGRLKHFIQSSLQRERVWIRWKKRTNYGHLKTGKVNSPSVFKRRIVMWHQKNKTNGINSWMQRIKTLESQPQKGDLYSALYERMPVPGINELKKSLQEDVDEKGLEPELKRKNDRNFKWRALRTLMDEDVAALKKLSESPNFDLDVILDPKST 482          
BLAST of Gchil562.t1 vs. uniprot
Match: A0A2V3J2I5_9FLOR (THO complex subunit 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2I5_9FLOR)

HSP 1 Score: 522 bits (1345), Expect = 4.940e-180
Identity = 256/472 (54.24%), Postives = 349/472 (73.94%), Query Frame = 0
Query:   13 PVEQYLQTKDALDKVLREKLKDPPTELAEELIEQFPAFNFFPTLLLLLTEKLRSPSPFDALYVVDIGTSLSVKERLDQHAPVTFLHYVFSFITLDDIVANLDAIRKRISALPRTPRRQLYFIKLFQSAIERDTHGLNAVRSGRLRLMLAESLRAWHPSGMNRRGAYASHPIAYDPLPEGHVDAALYNALWGLQKFLQNPSLAETDRSWKEAASALDTVIAAFESTAVRSDTVPYGVDYPTSPNVLNLQLADTRFRRHMLVQYAIFLHHLETTASLATSEKDSQTLRQSVDFCATLFGRSGDGEKLKFRVLALLEKDEGNRLKRFVQSLFQRERVWLRWKRT-NYSHLETGVLKSPTVFKKRTVLWHQKDKTPGVNSWLQRIESLETQAENGDLYGALSDRSPVPGVEELVQALQEDFDESGLDEESKRKNDRKFKWRALRTLMDDDVGVLRQLSQSPQLDLDGVLHARTSRT 483
            P+E+Y++ K+AL+K L ++LK+ P+++A EL+++FP  NF P+LL +L   L+S SPFDAL+VVDI T LS+K R+DQ AP+T +HY FSF+T+DDI  NL+AIR+RI A+PR P  QL+FIKLF+S IERD +GL+A RSGRLR+MLAESLR WHPSGMN RG Y + P+ + PLPE H+D+ALYNA+WGLQKFLQNPSLAE + +WKEA+  L TV++ FE+T V  D  P GV+Y TSP++L +QLAD  FRR +LVQYAIFLHH+ETT  L  S ++ +   Q+  F   LF  + +G++LK RV+ALL++ +G  L  F+QSL QRERVW+RWK+T NYS+++T  +   ++FKKRTVLWHQ+  +     WL+RIE+LE  +++ D++ A+ DR P PG++EL  A   D    G  E+S+ K+ R F WRALRTLMD+DVG L++LS SP  DL+ +    +  T
Sbjct:   13 PIEEYVKAKEALNKALTDRLKEDPSKVANELLKKFPKMNFQPSLLGVLVRILKSSSPFDALHVVDIATKLSIKGRVDQCAPITLMHYAFSFVTIDDIADNLEAIRQRIRAIPRAPLPQLFFIKLFKSVIERDIYGLHAERSGRLRVMLAESLRTWHPSGMNLRGTYGTRPVFHSPLPESHIDSALYNAIWGLQKFLQNPSLAEAESTWKEASVLLSTVLSVFETTPVNRDITPPGVEYSTSPHILEMQLADAHFRRELLVQYAIFLHHVETTGLLPVSSREKERGNQNAQFLRELFNHNNEGDRLKSRVMALLKRYDGWDLFYFLQSLLQRERVWVRWKKTSNYSNIKTATVSPSSIFKKRTVLWHQQHTSSSRKEWLKRIEALEGSSKDDDIFKAVYDRGPSPGLKELKLATHGD----GAVEDSESKDGRNFNWRALRTLMDEDVGALKKLSSSPDHDLNTIFCKTSGNT 480          
BLAST of Gchil562.t1 vs. uniprot
Match: A0A2V3INV9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INV9_9FLOR)

HSP 1 Score: 238 bits (608), Expect = 4.460e-73
Identity = 119/184 (64.67%), Postives = 143/184 (77.72%), Query Frame = 0
Query:   14 VEQYLQTKDALDKVLREKLKDPPTELAEELIEQFPAFNFFPTLLLLLTEKLRSPSPFDALYVVDIGTSLSVKERLDQHAPVTFLHYVFSFITLDDIVANLDAIRKRISALPRTPRRQLYFIKLFQSAIERDTHGLNAVRSGRLRLMLAESLRAWHPSGMNRRGAYASHPIAYDPLPEGHVDAAL 197
            +E+YL  K+ L  +L E+LKDPP E+  +L+ QFP  NF  TLL +LT +L++ SPFDAL+  D  T LSV+   D HAPVTFLHYVFSF T+DD+VANL+AIRKR+SA+PRTP  QLYFIKLFQSAIERD HGLNAVRSG  RL+LAESLRA HPS +NRRG Y  HPIAY+ LP+  V+ AL
Sbjct:   14 IEEYLTKKEPLKSLLTERLKDPPEEVTNDLLNQFPKANFLATLLGILTSQLKTSSPFDALHFADKATQLSVEGHFDPHAPVTFLHYVFSFATMDDLVANLEAIRKRVSAIPRTPLLQLYFIKLFQSAIERDMHGLNAVRSGCFRLLLAESLRASHPSAVNRRGTYTIHPIAYNALPQNSVEWAL 197          
BLAST of Gchil562.t1 vs. uniprot
Match: S0F2Z6_CHOCR (THO complex subunit 1, putative n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F2Z6_CHOCR)

HSP 1 Score: 249 bits (635), Expect = 1.250e-71
Identity = 158/420 (37.62%), Postives = 223/420 (53.10%), Query Frame = 0
Query:   71 DALYVVDIGTSLSVKERLDQHAPVTFLHYVFSFITLDDIVANLDAIRKRISALPR---TPRRQLYFIKLFQSAIERDTHGLNAVRSGRLRLMLAESLRAWHPSGMNRRG-AYASHPI----AYDPLPEGHVDAALYNALWGLQKFLQNPSLAETDRSWKEAASALDTVIAAFE--STAVRSDTVPYGVD--YPTSPNVLNLQLADTRFRRHMLVQYAIFLHHLETTASLATSEKDSQTLRQSVDFCATLFGRSGDGEKLKFRVLALLEKDEGNRLKRFVQSLFQRERVWLRWK-RTNYSHLETGVLKSPTVFKKRTVLW---------HQKDKTPGVNSWLQRIESLETQAENGDLYGALSD--RSPVPGVEELVQALQEDFDESGLDEESKRKNDRKFKWRALRTLMDDDVGVLRQLSQ 466
            +AL +VD    L     +++  P T L +VFS  T   + + + AIR+R  +  R   T    +Y IK   S I RD HG + + SGRLRL+LA +L  WHPSG+NRRG  Y    I      +   E   DAALY A WG+Q+F+QNPSLAE +  W  A  A++ ++  FE  ST       P      Y  +P++L+LQL D R RRH+L+Q  IFLH+LE     A SEK + +  +   FC +LF   G G  +K RV ALL++D   + KRFV SL QRER W+ WK RT Y HL     ++P  FK+R VL            K +  G   W  R ++  T     +    L D  R  V  +++L   LQED ++  + ++ KR  + KF WR+LR L ++ +  L Q+++
Sbjct:   69 NALAIVDCAVVLMRNGHVEERLPWTLLEFVFSSCTRGQLSSGIGAIRERFDSYRRAATTAITHVYVIKAAMSCINRDQHGSDPLLSGRLRLILAAALPVWHPSGLNRRGHVYDGGKIDLGSEMENTKESDFDAALYKAFWGVQEFMQNPSLAENEDVWNTARVAIERILDTFETISTLRNPSVAPESPSPKYMAAPSLLHLQLVDVRARRHVLIQLVIFLHYLEVIGQTAPSEKTTPSAYKKHGFCKSLFESDGKGTIIKGRVYALLDRDCPGKFKRFVVSLLQRERKWIDWKKRTGYKHLNAPRSEAPKEFKRRRVLSPVPDSLAPDQSKRRPDGPEEWELR-QAAWTVLPKSERIDPLRDPTRLKVSSIQDLKTQLQEDMEDPDITDDLKRIKNPKFVWRSLRLLCEESISTLLQITE 487          
BLAST of Gchil562.t1 vs. uniprot
Match: A0A2V3INS9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INS9_9FLOR)

HSP 1 Score: 111 bits (278), Expect = 1.060e-25
Identity = 55/96 (57.29%), Postives = 71/96 (73.96%), Query Frame = 0
Query:  389 LQRIESLETQAENGDLYGALSDRSPVPGVEELVQALQEDFDESGLDEESKRKNDRKFKWRALRTLMDDDVGVLRQLSQSPQLDLDGVLHARTSRTA 484
            +QRIE+LE Q + GDLY A  +R PVPG+ EL ++LQED DE GL+ E KRKNDR  KWRALRTL D+DV  LR+LS++P  DLD +L  +++  A
Sbjct:    1 MQRIETLEFQPQKGDLYSAYYERMPVPGINELKKSLQEDVDEKGLEVELKRKNDRNCKWRALRTLKDEDVAALRKLSEAPNFDLDVILDPKSTNGA 96          
BLAST of Gchil562.t1 vs. uniprot
Match: THOC1_ARATH (THO complex subunit 1 n=32 Tax=Brassicaceae TaxID=3700 RepID=THOC1_ARATH)

HSP 1 Score: 102 bits (254), Expect = 1.760e-19
Identity = 105/429 (24.48%), Postives = 184/429 (42.89%), Query Frame = 0
Query:   74 YVVDIGTSLSVKERLDQHAPVTFLHYVFSFITLD---DIVANLDAIRKRISALPRTPRRQLYFIKLFQSAIERDTHGLNAVRSGRLRLMLAESLRAWHPSGMNRRGAY-ASHPIAY--DPLPEG-HVDAALYNALWGLQKFLQNP-SLAETDRSWKEAASALDTVIAAF----------ESTAVRSDTVPYGVDYPTSPNVLNLQLADTRFRRHMLVQYAIFLHHLETTASLATSEKD--SQTLRQSVDFCATLFGRSGDGEKLKFRVLALLE--KDEGNRLKRFVQSLFQRERVWLRWKRTNYSHLETGVL--KSPTVF-KKRTVLWHQKDKTPGVNSWLQRIESLETQAENGDLYGALSDRSPVPGVEELVQALQEDFDES-GLDEESKRKNDRKFKWRALRTLMDDDVGVLRQLSQSPQLDLDGVL 476
            +++D+   L  KE ++       L  +    T+    D+   +++ +  +       R +L  ++     + R +   + V  GR+ + LA        S +N +G +  S+   Y  DP P+G  VD   Y   W LQ++  NP SL      W++ +S+L  V+  F          E+ ++  +   + + Y TS  ++ L+L D+ FRRH+L+Q  I   +L        ++KD  S+T+++ +  C               RV  LLE    +G    R V+ + +RE+ W+ WKR      E   +  KSP    KKR   W   +K          +  L   A+        S R   P + +  + L ED D S G+++E   KN+R + W+ LR     D   L   S+  ++ ++GV+
Sbjct:   86 HLLDVVLYLCEKEHVEGGMIFQLLEDLTEMSTMKNCKDVFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNETKYEKDP-PKGISVDFNFYKTFWSLQEYFCNPASLTSASTKWQKFSSSLAVVLNTFDAQPLSEEEGEANSLEEEAATFNIKYLTSSKLMGLELKDSSFRRHILLQCLIMFDYLRAPGK---NDKDLPSETMKEELKSCED-------------RVKKLLEITPPKGKEFLRAVEHILEREKNWVWWKRDGCPPFEKQPIDKKSPNAGQKKRRQRWRLGNK---------ELSQLWRWADQNPNALTDSQRVRTPDIADYWKPLAEDMDPSAGIEDEYHHKNNRVYCWKGLRFTARQD---LEGFSRFTEMGIEGVV 485          
BLAST of Gchil562.t1 vs. uniprot
Match: UPI0007EF435E (THO complex subunit 1 isoform X2 n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EF435E)

HSP 1 Score: 100 bits (248), Expect = 1.020e-18
Identity = 105/427 (24.59%), Postives = 182/427 (42.62%), Query Frame = 0
Query:   75 VVDIGTSLSVKERLDQHAPVTFLHYVFSFITL---DDIVANLDAIRKRISALPRTPRRQLYFIKLFQSAIERDTHGLNAVRSGRLRLMLAESLRAWHPSGMNRRGAY-ASHPIAYDP-LPEG-HVDAALYNALWGLQKFLQNP-SLAETDRSWKEAASALDTVIAAFESTAV----------RSDTVPYGVDYPTSPNVLNLQLADTRFRRHMLVQYAIFLHHLETTASLATSEKD--SQTLRQSVDFCATLFGRSGDGEKLKFRVLALLEKDEGNRLKRFVQSLFQRERVWLRWKRTNYSHLETGVLKSPTV---FKKRTVLWHQKDKTPGVNSWLQRIESLETQAENGDLYGALSD--RSPVPGVEELVQALQEDFDES-GLDEESKRKNDRKFKWRALRTLMDDDVGVLRQLSQSPQLDLDGVL 476
            ++DI   L  KE ++       L  +    T+    D+   +++ +  +       R +L  ++     + R +   + V  GR+ + LA        S +N +G +  S+   Y+   P+G  +D   Y   WGLQ+   NP SL      W +  S+L  V+  FE+  +            +   + + Y TS  ++ L+L D+ FRRH+LVQ  I   +L+        EKD  ++T++  +  C          E++K   L  +   +GN     ++ + +RER W+ WKR      E   +   +V    KKR   W   +K         ++  L   AE  D   AL+D  R   P + E  + L +D DE+ G++ E   KN+R + W+ LR     D   L   S+  +  ++GV+
Sbjct:   84 ILDIVLYLCEKEHIEGGMIFQLLEDLTEMSTMRNCKDVFGYIESKQDILGKPELFARGKLVMLRTCNQLLRRLSKANDVVFCGRIIMFLAHFFPLSERSAVNIKGVFNTSNETKYEKDTPDGISIDFNFYKTFWGLQENFSNPASLLHAPTKWHKFNSSLMVVLNTFEAQPLSDEEGNANNLEDEAATFNIKYLTSSKLMGLELKDSSFRRHILVQCLILFDYLKAPGK---REKDFFTETVKDEIKSCE---------ERVK--KLLTMTPPKGNEFLHSIEHILERERNWVWWKRDGCPPFEKQPIDRKSVQDGIKKRKPRWRLGNK---------QLSQLWKWAE--DNRDALTDPQRVRTPDITEYWKPLADDMDEAAGIEAEYHHKNNRVYCWKGLRFSARQD---LEGFSKFTEYGVEGVV 482          
BLAST of Gchil562.t1 vs. uniprot
Match: UPI00053A9F91 (THO complex subunit 1-like n=2 Tax=Camelina sativa TaxID=90675 RepID=UPI00053A9F91)

HSP 1 Score: 97.8 bits (242), Expect = 5.970e-18
Identity = 101/428 (23.60%), Postives = 178/428 (41.59%), Query Frame = 0
Query:   74 YVVDIGTSLSVKERLDQHAPVTFLHYVFSFITLD---DIVANLDAIRKRISALPRTPRRQLYFIKLFQSAIERDTHGLNAVRSGRLRLMLAESLRAWHPSGMNRRGAY-ASHPIAYDPLPEG--HVDAALYNALWGLQKFLQNP-SLAETDRSWKEAASALDTVIAAF----------ESTAVRSDTVPYGVDYPTSPNVLNLQLADTRFRRHMLVQYAIFLHHLETTASLATSEKD--SQTLRQSVDFCATLFGRSGDGEKLKFRVLALLE--KDEGNRLKRFVQSLFQRERVWLRWKRTNYSHLETGVL--KSPTVF-KKRTVLWHQKDKTPGVNSWLQRIESLETQAENGDLYGALSDRSPVPGVEELVQALQEDFDES-GLDEESKRKNDRKFKWRALRTLMDDDVGVLRQLSQSPQLDLDGVL 476
            +++D+   L  KE ++       L  +    T+    D+   +++ +  +       R +L  ++     + R +   + V  GR+ + LA        S +N +G +  S+   Y+  P     VD   Y   W LQ++  NP SL      W++ +S+L  V+  F          E+ ++  D   + + Y TS  ++ L++ D+ FRRH+L+Q  I   +L        ++KD  S+T+ +               +  + RV  LLE    +G    R V+ + +RE+ W+ WKR      E   +  KSP    KKR   W   +K          +  L   A+        S R   P + +  + L ED D S G+++E   KN+R + W+ LR     D   L   S+     ++GV+
Sbjct:  110 HLLDVVLYLCEKEHVEGGMIFQLLEDLTEMSTMKNCKDVFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNETKYEKDPPNGISVDFNFYKTFWSLQEYFCNPASLTSASTKWQKFSSSLAVVLNTFDAQPLSEEEGEANSLEEDAATFNIKYLTSSKLMGLEVKDSSFRRHILLQCLILFDYLRAPGK---NDKDLPSETMEEL--------------KSCEDRVKKLLEITPPKGKEFLRAVEHILEREKNWVWWKRDGCPPFEKQPIEEKSPNAGQKKRRQRWRMGNK---------ELSQLWRWADQNPNALTDSQRVRTPAIADYWKPLAEDMDPSAGIEDEYHHKNNRVYCWKGLRFAARQD---LEGFSRFTDFGIEGVV 508          
BLAST of Gchil562.t1 vs. uniprot
Match: UPI00053C4D6F (THO complex subunit 1 isoform X1 n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C4D6F)

HSP 1 Score: 96.7 bits (239), Expect = 1.350e-17
Identity = 100/412 (24.27%), Postives = 174/412 (42.23%), Query Frame = 0
Query:   74 YVVDIGTSLSVKERLDQHAPVTFLHYVFSFITLD---DIVANLDAIRKRISALPRTPRRQLYFIKLFQSAIERDTHGLNAVRSGRLRLMLAESLRAWHPSGMNRRGAY-ASHPIAY--DPLPEGHVDAALYNALWGLQKFLQNP-SLAETDRSWKEAASALDTVIAAFES----------TAVRSDTVPYGVDYPTSPNVLNLQLADTRFRRHMLVQYAIFLHHLETTASLATSEKD--SQTLRQSVDFCATLFGRSGDGEKLKFRVLALLE--KDEGNRLKRFVQSLFQRERVWLRWKRTNYSHLETGVLKSPTVF---KKRTVLWHQKDKTPGVNSWLQRIESLETQAENGDLYGALSD--RSPVPGVEELVQALQEDFDES-GLDEESKRKNDRKFKWRALRTLMDDDV 458
            +++D+   L  KE ++       L  +    T+    D+   +++ +  +       R +L  ++     + R +   + V  GR+ + LA        S +N +G +  S+   Y  DP     VD   Y   W LQ+   NP SL      W++  S+L  V+  FE+           ++  +   + + Y TS  ++ L+L D+ FRRH+L+Q  I   +L        ++KD  S+++++ +  C               RV  LLE    +G    R V+ + +RE+ W+ WKR      E   ++  ++    KKRT  W   +K       L ++     Q  N     AL+D  R   P + E  + L ED D S G++ E   KN+R + W+ LR     D+
Sbjct:   83 HLLDVVLYLCEKEHIEGGMIFQLLEDLTEMSTMKNCKDVFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNETKYEKDPPTGISVDFNFYKTFWSLQEVFCNPASLTGAQTKWQKFTSSLMVVLNTFEAQLLSEEEGEANSLEEEAATFNIKYLTSSKLMGLELKDSSFRRHILLQCLILFDYLRAPGK---NDKDLPSESMKEELKSCED-------------RVKKLLEITPPKGKEFLRAVEHILEREKNWVWWKRDGCPPFEKQPIEKKSLQAGQKKRTQRWRLGNKE------LSQLWRWADQNPN-----ALTDPQRVRTPAIAEYWKPLAEDMDPSAGIEAEYHHKNNRVYCWKGLRFTARQDL 467          
BLAST of Gchil562.t1 vs. uniprot
Match: A0A2I4EX28_JUGRE (THO complex subunit 1 n=12 Tax=Fagales TaxID=3502 RepID=A0A2I4EX28_JUGRE)

HSP 1 Score: 93.2 bits (230), Expect = 1.810e-16
Identity = 92/348 (26.44%), Postives = 147/348 (42.24%), Query Frame = 0
Query:  128 RRQLYFIKLFQSAIERDTHGLNAVRSGRLRLMLAESLRAWHPSGMNRRGAY-ASHPIAY--DPLPEG-HVDAALYNALWGLQKFLQNP-SLAETDRSWKEAASALDTVIAAFESTAV----------RSDTVPYGVDYPTSPNVLNLQLADTRFRRHMLVQYAIFLHHLETTASLATSEKD--SQTLRQSVDFCATLFGRSGDGEKLKFRVLALLEKD--EGNRLKRFVQSLFQRERVWLRWKRTNYSHLETGVLKSPTV---FKKRTVLWHQKDKTPG-VNSWLQRIESLETQAENGDLYGALSDRSPVPGVEELVQALQEDFDES-GLDEESKRKNDRKFKWRALR 451
            R +L  ++     + R +   + V  GR+ + LA        S +N +G + +S+   Y  DP P+G  +D   Y   W LQ++  NP SL      W++  S L  V+  FES  +            +   + + Y TS  ++ L+L D+ FRRH+LVQ  I   +L        +EKD  S+++++ +  C               RV  LLE    +G       + + +RE+ W+ WKR      E   L+  TV    KKR   W   +K    +  W  +     T  +          R   P + E  + L ED D S G++ E   KN+R + W+ LR
Sbjct:  139 RGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNSSNETKYEKDP-PDGISIDFNFYKTFWSLQEYFCNPASLTPAPAKWQKFTSGLMIVLNTFESQPLSDEEGDANNLEEEAANFSIKYLTSTKLMGLELKDSSFRRHILVQCLILFDYLRAPGK---NEKDLPSESMKEEIKSCEE-------------RVKKLLEMTPPKGKDFLSKTEHILEREKNWVWWKRDGCPAFEKQPLEKKTVQDGAKKRRPRWRLGNKELSQLWKWADQNPDAMTDPQ----------RVRTPSIMEYWKPLAEDMDASAGIEAEYHHKNNRVYCWKGLR 459          
The following BLAST results are available for this feature:
BLAST of Gchil562.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZN9_9FLOR4.500e-24069.72THO complex subunit 1 n=1 Tax=Gracilariopsis chord... [more]
A0A2V3J2I5_9FLOR4.940e-18054.24THO complex subunit 1 n=1 Tax=Gracilariopsis chord... [more]
A0A2V3INV9_9FLOR4.460e-7364.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
S0F2Z6_CHOCR1.250e-7137.62THO complex subunit 1, putative n=1 Tax=Chondrus c... [more]
A0A2V3INS9_9FLOR1.060e-2557.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
THOC1_ARATH1.760e-1924.48THO complex subunit 1 n=32 Tax=Brassicaceae TaxID=... [more]
UPI0007EF435E1.020e-1824.59THO complex subunit 1 isoform X2 n=2 Tax=Daucus ca... [more]
UPI00053A9F915.970e-1823.60THO complex subunit 1-like n=2 Tax=Camelina sativa... [more]
UPI00053C4D6F1.350e-1724.27THO complex subunit 1 isoform X1 n=2 Tax=Tarenaya ... [more]
A0A2I4EX28_JUGRE1.810e-1626.44THO complex subunit 1 n=12 Tax=Fagales TaxID=3502 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021861THO complex, subunit THOC1PFAMPF11957efThoc1coord: 148..239
e-value: 2.4E-8
score: 33.1
coord: 250..466
e-value: 5.2E-20
score: 71.6
IPR021861THO complex, subunit THOC1PANTHERPTHR13265THO COMPLEX SUBUNIT 1coord: 149..463
NoneNo IPR availablePANTHERPTHR13265:SF0HPR1coord: 149..463

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004380_piloncontigtig00004380_pilon:214924..216396 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil562.t1Gchil562.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004380_pilon 214924..216396 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil562.t1 ID=Gchil562.t1|Name=Gchil562.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=491bp
MSPANEPDSKQGPVEQYLQTKDALDKVLREKLKDPPTELAEELIEQFPAF
NFFPTLLLLLTEKLRSPSPFDALYVVDIGTSLSVKERLDQHAPVTFLHYV
FSFITLDDIVANLDAIRKRISALPRTPRRQLYFIKLFQSAIERDTHGLNA
VRSGRLRLMLAESLRAWHPSGMNRRGAYASHPIAYDPLPEGHVDAALYNA
LWGLQKFLQNPSLAETDRSWKEAASALDTVIAAFESTAVRSDTVPYGVDY
PTSPNVLNLQLADTRFRRHMLVQYAIFLHHLETTASLATSEKDSQTLRQS
VDFCATLFGRSGDGEKLKFRVLALLEKDEGNRLKRFVQSLFQRERVWLRW
KRTNYSHLETGVLKSPTVFKKRTVLWHQKDKTPGVNSWLQRIESLETQAE
NGDLYGALSDRSPVPGVEELVQALQEDFDESGLDEESKRKNDRKFKWRAL
RTLMDDDVGVLRQLSQSPQLDLDGVLHARTSRTAGCNSQE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021861THO_THOC1