Gchil5547.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5547.t1
Unique NameGchil5547.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length196
Homology
BLAST of Gchil5547.t1 vs. uniprot
Match: A0A2V3J7B9_9FLOR (Eukaryotic translation initiation factor 4E type 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J7B9_9FLOR)

HSP 1 Score: 374 bits (959), Expect = 9.450e-131
Identity = 182/191 (95.29%), Postives = 185/191 (96.86%), Query Frame = 0
Query:    1 MAATGKSWLAAAAAPVRTQPKGGHLLHRTYQFSYVHRSMDHKNEDYKNQIRNIATVGTVEEFWAVYTHLNRVNKLSPNTDYFLFQKGVQPMWEDDANKRGGRLTIRLQKAASPRAFEDLCLALIGEQFETDDICGIACSVRTYENNLSIWLKDASNKQLLVRVESIARRALNLEPKIVLRDWSFKAHNMDQ 191
            MAATGKSWLAAAAAPVRTQPKGGHLLHRTYQFSYVHRSMD KNEDYKNQI+NIATVGTVEEFWAVYTHLNRVNKLSPNTDYFLFQKGVQPMWEDDANKRGGRLTIRLQKAASPRAFEDLCLALIGEQFETDDICGIACSVRTYENNLSIWLKDA+NKQLL RVE+IARR LNLE KIVLRDWSFK HN DQ
Sbjct:    1 MAATGKSWLAAAAAPVRTQPKGGHLLHRTYQFSYVHRSMDRKNEDYKNQIKNIATVGTVEEFWAVYTHLNRVNKLSPNTDYFLFQKGVQPMWEDDANKRGGRLTIRLQKAASPRAFEDLCLALIGEQFETDDICGIACSVRTYENNLSIWLKDANNKQLLGRVEAIARRVLNLEAKIVLRDWSFKPHNTDQ 191          
BLAST of Gchil5547.t1 vs. uniprot
Match: R7QML7_CHOCR (Translation initiation factor eIF4, subunit E, type 2 (Fragment) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QML7_CHOCR)

HSP 1 Score: 226 bits (576), Expect = 2.130e-72
Identity = 114/167 (68.26%), Postives = 129/167 (77.25%), Query Frame = 0
Query:    7 SWLAAAAAPVRTQPKGGHLLHRTYQFSYVHRSMDHKNEDYKNQIRNIATVGTVEEFWAVYTHLNRVNKLSPNTDYFLFQKGVQPMWEDDANKRGGRLTIRLQKAASPRAFEDLCLALIGEQFETDDICGIACSVRTYENNLSIWLKDASNKQLLVRVESIARRALNL 173
            S LAA  AP       GHLLHRTY FSYV R+ + K E+Y  QI+ IA V TVEEFW VYTHL RV+KL P TDY+LFQ+GVQPMWEDDANKRGGRL +R+QK ASPRAFEDLCLA+IGEQF+TDDICGIACSVR  EN LSIW++DA NK  +  VE+ AR  L L
Sbjct:   28 SALAAKNAPPSVP--AGHLLHRTYHFSYVRRTFEKKAENYGAQIKRIAAVATVEEFWGVYTHLQRVSKLPPMTDYYLFQEGVQPMWEDDANKRGGRLLLRVQKHASPRAFEDLCLAVIGEQFDTDDICGIACSVRFQENYLSIWVRDAKNKPAIAAVENKARGILKL 192          
BLAST of Gchil5547.t1 vs. uniprot
Match: L8H0E9_ACACA (Eukaryotic initiation factor 4E n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H0E9_ACACA)

HSP 1 Score: 158 bits (400), Expect = 3.770e-45
Identity = 77/175 (44.00%), Postives = 108/175 (61.71%), Query Frame = 0
Query:   15 PVRTQPKGGHLLHRTYQFSYVHRSMDHKNEDYKNQIRNIATVGTVEEFWAVYTHLNRVNKLSPNTDYFLFQKGVQPMWEDDANKRGGRLTIRLQKAASPRAFEDLCLALIGEQFET-DDICGIACSVRTYENNLSIWLKDASNKQLLVRVESIARRALNLEPKIVLRDWSFKAHN 188
            P    P+GGH L   Y F +V RS     E+Y N I+ I    ++E FW  Y HL R + L   +DY LF++G++PMWEDDANKRGG+  IRL+K  + + +EDL LA++GEQF+  D+ICGI CS+R  E+ LS+W K A NKQ  +++    +  LNL P   +    +K H+
Sbjct:   55 PAGVDPEGGHFLSSGYTFWFVRRSGARSQENYANAIKRIGGFRSIEGFWKYYNHLVRPHDLPNTSDYHLFKEGIKPMWEDDANKRGGKWIIRLKKGLATKYWEDLLLAIVGEQFQVGDEICGIVCSIRFNEDILSVWNKSADNKQARLKIHETLKTVLNLPPNTPME---YKCHD 226          
BLAST of Gchil5547.t1 vs. uniprot
Match: A0A7S0BL84_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BL84_9RHOD)

HSP 1 Score: 155 bits (391), Expect = 2.540e-44
Identity = 72/172 (41.86%), Postives = 111/172 (64.53%), Query Frame = 0
Query:   19 QPKGGHLLHRTYQFSYVHRSMDHKNEDYKNQIRNIATVGTVEEFWAVYTHLNRVNKLSPNTDYFLFQKGVQPMWEDDANKRGGRLTIRLQKAASPRAFEDLCLALIGEQF-ETDDICGIACSVRTYENNLSIWLKDASNKQLLVRVESIARRALNLEPKIVLRDWSFKAHNM 189
            +P G H L+  + FS++ RS   +NE Y + I+ I + G+VE+FW+ YTHL R N L  NTDY++F++ ++P+WED  NK GGR TIRL+K  + RAFED+ + L+GEQF E + + G+A SVR  E+ LS+W + +  +  L  +  +A+ A+   P +   DW +K H +
Sbjct:   16 RPVGRHQLNSRFHFSFMKRSATSRNETYGSSIKEIGSFGSVEDFWSFYTHLTRPNDLPVNTDYYVFREPIKPLWEDPENKHGGRWTIRLKKGIANRAFEDMSICLMGEQFDEYETVNGLALSVRYQEDILSLWTRTSDEQPRLDSIRDVAQAAMEYLPTMKNTDWEYKRHEV 187          
BLAST of Gchil5547.t1 vs. uniprot
Match: A0A1X2G7J4_9FUNG (Eukaryotic translation initiation factor 4E n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2G7J4_9FUNG)

HSP 1 Score: 149 bits (376), Expect = 4.030e-42
Identity = 73/175 (41.71%), Postives = 114/175 (65.14%), Query Frame = 0
Query:   16 VRTQPKGGHLLHRTYQFSYVHRSMDHKNEDYKNQIRNIATVGTVEEFWAVYTHLNRVNKLSPNTDYFLFQKGVQPMWEDDANKRGGRLTIRLQKAASPRAFEDLCLALIGEQFET-DDICGIACSVRTYENNLSIWLKDASNKQLLVRVESIARRALNLEPKIVLRDWSFKAHNM 189
            ++ QP   H LH  +   ++HRS   K  +Y++ +R IA+  TVEEFW+VYTHL R N+L   +DY LF+ G++PMWED AN +GG+  +RL+K  + R +EDL LA+IG+QF+  ++ICG   S+R  E+ +SIW K A+N ++ +++    +R LNL     +    +K+HN+
Sbjct:    8 LQQQPMPQHALHYAWIVWFIHRSPRTKITNYEDSMRKIASFSTVEEFWSVYTHLTRPNELPAISDYHLFKNGIRPMWEDPANVQGGKWIVRLKKGLASRYWEDLVLAMIGDQFDVHNEICGAVLSIRNSEDIISIWNKSANNGKINLKIRDTMKRILNLPSDTPME---YKSHNI 179          
BLAST of Gchil5547.t1 vs. uniprot
Match: A0A068RRF4_9FUNG (Eukaryotic translation initiation factor 4e type2 isoform 3 n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068RRF4_9FUNG)

HSP 1 Score: 147 bits (370), Expect = 3.140e-41
Identity = 76/180 (42.22%), Postives = 116/180 (64.44%), Query Frame = 0
Query:   10 AAAAAPVRTQPKGGHLLHRTYQFSYVHRSMDHKNEDYKNQIRNIATVGTVEEFWAVYTHLNRVNKLSPNTDYFLFQKGVQPMWEDDANKRGGRLTIRLQKAASPRAFEDLCLALIGEQFET-DDICGIACSVRTYENNLSIWLKDASNKQLLVRVESIARRALNLEPKIVLRDWSFKAHN 188
            AA AA V T     H L  T+ F ++HR    K +DY+  ++ IA+  TVEEFWAVY+HL R + L   +DY LF++GV+P+WEDDAN RGG+  +RL+K  + R +E L LA++GEQF+  D+ICG   S+R+ E+ +S+W K A+N ++ +++    ++ LNL  +  +    +K HN
Sbjct:    6 AAPAASVGTH----HPLSSTWVFWFMHRMPKAKIKDYEGSMKRIASFSTVEEFWAVYSHLRRPSDLPTISDYHLFKQGVRPVWEDDANIRGGKWIVRLKKGLASRYWEQLLLAIVGEQFDVGDEICGAVLSIRSSEDIISVWNKTAANGRINLKIRDTIKKMLNLPAETTME---YKTHN 178          
BLAST of Gchil5547.t1 vs. uniprot
Match: A0A1X2IQP9_9FUNG (Translation initiation factor eIF 4e-like domain-containing protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IQP9_9FUNG)

HSP 1 Score: 146 bits (368), Expect = 8.910e-41
Identity = 70/177 (39.55%), Postives = 117/177 (66.10%), Query Frame = 0
Query:   14 APVRTQPKGGHLLHRTYQFSYVHRSMDHKNEDYKNQIRNIATVGTVEEFWAVYTHLNRVNKLSPNTDYFLFQKGVQPMWEDDANKRGGRLTIRLQKAASPRAFEDLCLALIGEQFET-DDICGIACSVRTYENNLSIWLKDASNKQLLVRVESIARRALNLEPKIVLRDWSFKAHNM 189
            +P + +    H LH ++ F ++HRS   K  +Y++Q++ IAT  ++EEFWAVY+H+NR + L   +DY LF+ GV+PMWED AN +GG+  +R++K  + R +E+L LA+IG+QF+  D+ICG   S+R  E+ +SIW K +SN ++ +++    ++ LNL     +    +K+HN+
Sbjct:   18 SPSKDEEALQHPLHYSWVFWFMHRSPGSKITNYEDQMKRIATFSSIEEFWAVYSHINRPHDLPTISDYHLFKHGVRPMWEDAANIQGGKWIVRVKKGLASRYWENLVLAIIGDQFDVQDEICGAVLSIRNSEDIISIWNKTSSNGRINLKIRDTVKKVLNLPQDTTME---YKSHNV 191          
BLAST of Gchil5547.t1 vs. uniprot
Match: A0A367JBU2_RHIST (Eukaryotic translation initiation factor 4E type 2 n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367JBU2_RHIST)

HSP 1 Score: 145 bits (366), Expect = 1.340e-40
Identity = 74/172 (43.02%), Postives = 111/172 (64.53%), Query Frame = 0
Query:   18 TQPKGGHLLHRTYQFSYVHRSMDHKNEDYKNQIRNIATVGTVEEFWAVYTHLNRVNKLSPNTDYFLFQKGVQPMWEDDANKRGGRLTIRLQKAASPRAFEDLCLALIGEQFETDD-ICGIACSVRTYENNLSIWLKDASNKQLLVRVESIARRALNLEPKIVLRDWSFKAHN 188
            TQ    H L   + F ++HRS   K  DY+  ++ IAT  TVEEFWAVY+HL R ++L   +DY LF++GV+P+WEDD N  GG+  +R++K  + R +E L LA+IG+QFE DD ICG   S+R  E+ +S+W K +SN ++ +++    +R LNL  +I++    +K HN
Sbjct:   12 TQSPESHALCYGWVFWFMHRSPGEKIVDYEAAMKKIATFKTVEEFWAVYSHLRRPSELPNISDYHLFKQGVRPVWEDDVNINGGKWIVRIKKGLASRYWELLVLAIIGDQFEVDDEICGAVLSIRGSEDIISLWNKTSSNGKINLKIRDTIKRQLNLPAEIIME---YKTHN 180          
BLAST of Gchil5547.t1 vs. uniprot
Match: A0A168S309_ABSGL (Uncharacterized protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168S309_ABSGL)

HSP 1 Score: 145 bits (365), Expect = 2.060e-40
Identity = 71/184 (38.59%), Postives = 122/184 (66.30%), Query Frame = 0
Query:    7 SWLAAAAAPVRTQPKGGHLLHRTYQFSYVHRSMDHKNEDYKNQIRNIATVGTVEEFWAVYTHLNRVNKLSPNTDYFLFQKGVQPMWEDDANKRGGRLTIRLQKAASPRAFEDLCLALIGEQFET-DDICGIACSVRTYENNLSIWLKDASNKQLLVRVESIARRALNLEPKIVLRDWSFKAHNM 189
            S L+A ++P+  +   GH LH ++ F ++HRS   K  +Y+ Q++ IAT  T+EEFWAVY+H+NR + L   +DY LF+ GV+PMWED AN +GG+  +R++K  + R +E+L +A+IG+QF+  D+ICG   S+R  E+ +S+W K ++N ++ +++    ++ L+L     +    +K+HN+
Sbjct:    5 SSLSATSSPM-DRVNDGHPLHYSWVFWFMHRSPGSKITNYEGQMKKIATFSTIEEFWAVYSHINRPHDLPAISDYHLFKHGVRPMWEDAANIQGGKWIVRVKKGLASRYWENLVMAIIGDQFDVQDEICGAVLSIRNSEDIISVWNKTSANGRINLKIRDTIKKVLSLPNDTTME---YKSHNV 184          
BLAST of Gchil5547.t1 vs. uniprot
Match: A0A8J6BDQ0_ELECQ (Uncharacterized protein n=3 Tax=Hyloidea TaxID=8417 RepID=A0A8J6BDQ0_ELECQ)

HSP 1 Score: 145 bits (366), Expect = 2.120e-40
Identity = 79/186 (42.47%), Postives = 113/186 (60.75%), Query Frame = 0
Query:    6 KSWLAAAAAPVRTQPKGGHLLHRTYQFSYVHR--SMDHKNEDYKNQIRNIATVGTVEEFWAVYTHLNRVNKLSPNTDYFLFQKGVQPMWEDDANKRGGRLTIRLQKAASPRAFEDLCLALIGEQFET-DDICGIACSVRTYENNLSIWLKDASNKQLLVRVESIARRALNLEPKIVLRDWSFKAHN 188
            +S +AA +  V   P G H L   Y F Y  R  S      +Y+  IR   TV +VE+FW VY+HL R   LS  TD+ LF++G++PMWEDDANK GG+  IRL+K  + R +E++ LA++GEQF   ++ICG+  S+R  E+ LSIW K A+++   +R+    RR LNL P  ++    +K HN
Sbjct:   15 ESKVAARSKEVAVAP-GEHPLQYRYTFWYSRRTPSRPASTHNYEQNIRQFGTVASVEQFWRVYSHLVRPGDLSGYTDFHLFKEGIKPMWEDDANKNGGKWIIRLRKGLASRFWENIILAMVGEQFMVGEEICGVVVSIRFQEDILSIWNKTANDQLSTIRIRDTLRRVLNLPPNTIME---YKTHN 196          
The following BLAST results are available for this feature:
BLAST of Gchil5547.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J7B9_9FLOR9.450e-13195.29Eukaryotic translation initiation factor 4E type 2... [more]
R7QML7_CHOCR2.130e-7268.26Translation initiation factor eIF4, subunit E, typ... [more]
L8H0E9_ACACA3.770e-4544.00Eukaryotic initiation factor 4E n=1 Tax=Acanthamoe... [more]
A0A7S0BL84_9RHOD2.540e-4441.86Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A1X2G7J4_9FUNG4.030e-4241.71Eukaryotic translation initiation factor 4E n=1 Ta... [more]
A0A068RRF4_9FUNG3.140e-4142.22Eukaryotic translation initiation factor 4e type2 ... [more]
A0A1X2IQP9_9FUNG8.910e-4139.55Translation initiation factor eIF 4e-like domain-c... [more]
A0A367JBU2_RHIST1.340e-4043.02Eukaryotic translation initiation factor 4E type 2... [more]
A0A168S309_ABSGL2.060e-4038.59Uncharacterized protein n=1 Tax=Absidia glauca Tax... [more]
A0A8J6BDQ0_ELECQ2.120e-4042.47Uncharacterized protein n=3 Tax=Hyloidea TaxID=841... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001040Translation Initiation factor eIF- 4ePFAMPF01652IF4Ecoord: 26..176
e-value: 6.2E-45
score: 152.8
IPR001040Translation Initiation factor eIF- 4ePANTHERPTHR11960EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATEDcoord: 19..188
IPR023398Translation Initiation factor eIF- 4e-likeGENE3D3.30.760.10RNA Cap, Translation Initiation Factor Eif4ecoord: 9..194
e-value: 3.2E-52
score: 178.9
IPR023398Translation Initiation factor eIF- 4e-likeSUPERFAMILY55418eIF4e-likecoord: 17..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:2376824..2377411 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5547.t1Gchil5547.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 2376824..2377411 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5547.t1 ID=Gchil5547.t1|Name=Gchil5547.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=196bp
MAATGKSWLAAAAAPVRTQPKGGHLLHRTYQFSYVHRSMDHKNEDYKNQI
RNIATVGTVEEFWAVYTHLNRVNKLSPNTDYFLFQKGVQPMWEDDANKRG
GRLTIRLQKAASPRAFEDLCLALIGEQFETDDICGIACSVRTYENNLSIW
LKDASNKQLLVRVESIARRALNLEPKIVLRDWSFKAHNMDQSPSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001040TIF_eIF_4E
IPR023398TIF_eIF4e-like