Gchil5544.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5544.t1
Unique NameGchil5544.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length959
Homology
BLAST of Gchil5544.t1 vs. uniprot
Match: A0A2V3J6U8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6U8_9FLOR)

HSP 1 Score: 1174 bits (3037), Expect = 0.000e+0
Identity = 596/947 (62.94%), Postives = 718/947 (75.82%), Query Frame = 0
Query:    9 FPVTMENIQNALAILHRGDQSISEADRYLSHARTSPQLWNVLPALLNSPSQPQLLFAAHALYTRIHADWLVMDQSSRSAAVSLALGALMSPSLDQQNQATRSSAVYYFGKALGDAVSRSPQSFQESMWEMLVLKLRDKPALKCDVMAAIAAEMDQNATSHVANHVQIRAFCRCKAHQVVPDAVFLLISCPRNGPITEEQMQLFKAAVQCLQAWTPYADKMQIANALLHVIVVPQLAQSGTEALNEIVGYSGTSLPLLLSTTKGLMAAFHGASGPDAHSIHHAISEVVCSLSDGNADELMEQQTEQSREVIRNVIDLLWTCLNAPDKSSFFAAIEGWMAWIAADHLMQEDQARLGSERICAVLTVVIRRMESLGFVRDQLNPNLVDCESEEEKGPVLDLLATGALSIGHHQYLALVSKFLSTDDSMPPTQICAALEAIGASKDSVEDTNIDEREWNKSKQLLERVLDLAIVRSANGISNDAVFHWQTALQRSALSALASHSVLLTRDEKLFHRTAACAANVLLKNEVADRGATLLQSLAEIQPHSLLPFLGDLITALNQSVSGMSTGAAEQAMYAVANIASLLPVRQERVNALEDMVRKPCERLCIAAAGGIEASLNEPVLCRDLTLLSTAMRVYNDHEAVAFVFQRVREAVFYLARRQCGNGMISKAICSLLEVNTLPTLFDEDDETSGDRACFRDEKSRLHLIMAVTKLLGECFKDSGPDGEDVWLKAMTKLIPDLVTGVEDALGTCDGEPLKCITECVGCAVVGLNMFSGSDYDTQPDMTRMFLKLVSTLTKRASSALLPVASEISRIAVGTMYCHNVGNVKVSLNFWKALFSRTAGAPLQQTVLNIANGPNGVCAGALCAARNSRCASDVADVLFAMCRIISGEMDENQILRDCLKAAFSVGSVPKEGLDRNVREMLFRGCYDSAGSKKDFRKALDEVGRVCGM 955
             P+T ENI  AL +L  GD  +  AD YL+ AR SPQ+W VLPALL S SQ  LLF A ALYTRI +DWL +D + RS+AVSLA+ AL+S SL QQ QA  SS V+Y GKALG AVS SPQ FQE +WEMLVLKL+ + ALKCDVMAAIA E+D NATSHVANHVQIRAFCR +AHQVVPDA++LL S   N  ++EE ++  + AVQCLQ+WTPYADK Q+A+ALL VI +PQLA S TEALNEIVGYSGTSLPLLL T +GL AAFH A GPD H +HHAISEVVCSLS+ NADELMEQQT+QSR VI  VI+LLW CLN PDK+SFFAAIEGWMAW+AADHLMQ DQ RLG +R+ AVL+VVI+RMESL FVR    P L + + ++EKGPV+DLL  G+LSIGH++Y+ L SKFLS   S PP QICA LEA+ AS            +W   +++LE V+ L    +A  I N     WQT L+ S L ALAS+++LL +D+KLF+R+A CA   L + E+A +GA LL++L E+ P+ L+ FL DLI  LN SV+ MS  AAE+A YAVA+IA  L  R ERV+ALE++VRK CERLC+AA G  +  LNE  LCRDL LLSTA+RVYND EA   VFQR+R+AVF L RR C NG+ISKAIC+LLEVN  PTL DEDDE S +     DEK RL   ++V KL+ ECFK SGPDGE+ WLK M KL+PDLVTG+ED +G  DG+ L C+ ECV CAVVGL  FS  ++DTQP+MTR+  KLV+TLT RAS  +LP+ASEIS  A+  +    VG+VK  L+FWKALFSR AGA LQQTVLN+  GPN + AGALCAAR +RCASD ADVLFAMCRII+G++DE Q+LR+CL++AF + +VPKEGL+R+VREMLFRGCY S G+KK+FRKALD+VGRVCGM
Sbjct:    8 LPITTENIHKALLVLQHGDHRLLHADHYLAQARASPQVWQVLPALLASTSQTSLLFGAQALYTRIRSDWLALDDNIRSSAVSLAVEALLSHSLAQQTQANCSSVVHYLGKALGCAVSMSPQQFQEPLWEMLVLKLQGRRALKCDVMAAIATELDHNATSHVANHVQIRAFCRSRAHQVVPDAIYLLNSVRNNETVSEECIKQLRVAVQCLQSWTPYADKAQVADALLKVIGIPQLAGSVTEALNEIVGYSGTSLPLLLCTARGLTAAFHAARGPDMHIVHHAISEVVCSLSEWNADELMEQQTDQSRVVIHTVIELLWICLNVPDKASFFAAIEGWMAWVAADHLMQADQPRLGVDRVSAVLSVVIQRMESLSFVRACFEPELDEEDGDDEKGPVVDLLCVGSLSIGHYKYILLTSKFLSEASSRPPGQICATLEALAASTXXXXXXXXXXHDWKGVREVLETVIRLVESGAAGSIQNGDGHPWQTVLRSSGLKALASYTLLLVKDDKLFYRSAVCAVRALQQPELARQGACLLRNLGEVGPNFLVQFLQDLIMVLNHSVTKMSVSAAEEATYAVASIACKLETRGERVSALEELVRKACERLCVAARGKDDLVLNEASLCRDLILLSTAVRVYNDQEAAVCVFQRIRDAVFQLCRRHCANGVISKAICTLLEVNASPTLLDEDDEVSDECVSAHDEKCRLAFTVSVLKLVAECFKRSGPDGENAWLKTMNKLVPDLVTGMEDNMGVFDGDALDCVRECVQCAVVGLKNFSSENFDTQPEMTRLVFKLVTTLTTRASGTVLPLASEISHTAMRIIQSSEVGSVKAGLSFWKALFSRRAGAMLQQTVLNVTGGPNAIAAGALCAARYTRCASDAADVLFAMCRIIAGQLDEKQMLRECLRSAFGMENVPKEGLERSVREMLFRGCYSSVGNKKEFRKALDKVGRVCGM 954          
BLAST of Gchil5544.t1 vs. uniprot
Match: R7QDU7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDU7_CHOCR)

HSP 1 Score: 506 bits (1304), Expect = 1.740e-161
Identity = 319/913 (34.94%), Postives = 493/913 (54.00%), Query Frame = 0
Query:   63 LFAAHALYTRIHADWLVM-DQSSRSAAVSLALGALMSPSLDQQNQATRSSAVYYFGKALGDAVSRS-PQSFQESMWEMLVLKLRDKPALKCDVMAAIAAEMDQNATSHVANHVQIRAFCRCKAHQVVPDAVFLLISCPRNGPITEEQMQL--FKAAVQCLQAWTPYADKMQIANALLHVIVVPQLAQSGTEALNEIVGYSGTSLPLLLSTTKGLMAAFHGASGPDAHS-IHHAISEVVCSLSDGNADELMEQQTEQSREVIRNVIDLLWTCLNAPDKSSFFAAIEGWMAWIAADHLMQEDQARLGSERICAVLTVVIRRMESLGFVRDQLNPNLVDC-ESEEEKGPVLDLLATGALSIGHHQYLALVSKFLSTDDSMPPTQICAALEAIGASKDSVEDTNIDEREWNKSKQLLERVLDLAIVRSANGISNDAVFHWQTALQRSALSALASHSVLLTRD--EKLFHRTAACAANVLLKNEVADRGATLLQSLAEIQPHSLLPFLGDLITALNQSVSGMSTGAAEQAMYAVANIASLLPVRQERVNALEDMVRKPCERLCIAAAGGIEASLNEPVLCRDLTLLSTAMRVYNDHEAVAFVFQRVREAVFYLARRQCGNGMISKAICSLLEVNTLPTLFDEDDETSGDRACFRDEKS---------RLHLIMAVTKLLGECFKDSGPDGEDVWLKAMTKLIPDLVTGVEDALGT-CDGEPLKCITECVGCAVVGLNMFSGSDYDTQPDMTRMFLKLVSTLTKRASSALLPVASEISRIAVGT--MYCHNVGNVKVSLNFWKALFSRTAGAPLQQTVLNIANGPNGVCAGALCAARNSRCASDVADVLFAMCRII---SGEMDENQILRDCLKAAFSVGSVPKEGLDRNVREMLFRGCYDSAGSKKDFRKALDEVGRV 952
            +FAA+ ++ R  ADWL   +++    A  L L  L          A  +S V++FGK  G  +S +   + ++ MW  L+ +L     LKC+ +AA   E+D  + SHV  +  +RAFC+ KAH+V+   V +L S         + M +   +AAV CL AW  YAD+  IA+ LL  I VPQLA   +E L E+VGYSG+++ LL+ T  GL++ F    G    S +HHAI+EVV SLSDGNADEL+EQ    S  ++     LL  CL   D +SFFA+++GW +WI A +L++++QARL  ER+  V+ +V++R+ SL F+ D    +   C E+ +E   V DLL      IG   Y+ ++  F  TD ++    +CAAL ++  + +  E     + + +    LL R+LDL    SAN  S +A  +   +++  ALSA+ S + LL+    E  F R   CA   +L  +V ++ +  L  LA+  P  L  FL DL+++  +++S MS  AA   +  +A + S L  R ER  AL  ++ +PC+ L ++     E S  E  +CR L L++  ++  ND+E    V+ R+R  +F +A  +CGN  +S+AIC +LEV  LPTL D++       A   D +          R  L M+   L  ECF+ SG DGE VWL A+ ++ P +V  ++   GT  +G  L C+   +  ++ GL  F+  +YD++ DM   + +  + L    SS  + +         G   + C+ +  V+ +L +WK++F    G  + + +L  A G + +    +CAAR++RCA  VAD LFA+C+ +   SG +D + +LR CL AAF+   V   GLD  VRE L+R C  + GS +DFR+AL E GRV
Sbjct:    1 MFAANTIHARTRADWLTFANEAHFLTAFHLVLEGLERAKHISSAGAAATSPVHFFGKTSGFCLSMAHTPNLRDVMWASLISQLGSDHVLKCNALAAAVQEIDHTSDSHVETYAVMRAFCQSKAHEVLTSPVAVLASLDAAPLSPHKPMSIPDLRAAVLCLHAWQRYADRNAIASVLLKAIRVPQLADDASETLAEMVGYSGSNMQLLMGTCDGLLSTFQHVRGCSGQSTVHHAIAEVVSSLSDGNADELLEQVNTNSVLIVEKATQLLTLCLELRDDASFFASVQGWTSWITAANLVEQNQARLVLERVAHVVRLVVQRITSLQFMADLTESHGRGCPETNDELVCVRDLLLESTKCIGIGGYVEVIKPFFETDWNVSTRSLCAALFSVAVAGEIDESVGSQKEDRHVVLGLLGRILDLIETISAN--SREAG-NGYASVKIFALSAMCSFAELLSDQGSEAEFRRALHCAGTGILDPQVNEKSSEFLYELADAHPERLRMFLTDLLSSGTRALSQMSDKAALNCVRGLAKVTSALETRGERQKALNIILEEPCKYL-LSTRNEQETSTVEQKVCRSLGLVAAGLQEVNDNEIAMNVYSRLRGTIFEIAISRCGNETVSRAICRVLEVCVLPTLLDDEQPRPAALAHNEDTRGIPASSVGCGRAVLAMSCMSLAAECFRRSGEDGETVWLSAVAEIAPHVVEFLDGGCGTEAEGRALACLRMSLEHSLEGLQSFTNGNYDSRKDMAVEYFRFATRLLSAESSVAVIIQKSSGSADAGLKGLQCNEIIVVREALLWWKSVFGPGQGE-VARAILAGAGGADNIARAFVCAARHTRCAGAVADALFALCKWVAQVSGNIDPDNVLRTCLTAAFAAEGVASLGLDVKVRETLYRSCISATGSMRDFRQALREFGRV 908          
The following BLAST results are available for this feature:
BLAST of Gchil5544.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J6U8_9FLOR0.000e+062.94Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QDU7_CHOCR1.740e-16134.94Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 9..956
e-value: 7.4E-47
score: 162.1
NoneNo IPR availablePANTHERPTHR12363TRANSPORTIN 3 AND IMPORTIN 13coord: 12..912
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 13..842

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:2370274..2373150 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5544.t1Gchil5544.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 2370274..2373150 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5544.t1 ID=Gchil5544.t1|Name=Gchil5544.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=959bp
MQRNGDPAFPVTMENIQNALAILHRGDQSISEADRYLSHARTSPQLWNVL
PALLNSPSQPQLLFAAHALYTRIHADWLVMDQSSRSAAVSLALGALMSPS
LDQQNQATRSSAVYYFGKALGDAVSRSPQSFQESMWEMLVLKLRDKPALK
CDVMAAIAAEMDQNATSHVANHVQIRAFCRCKAHQVVPDAVFLLISCPRN
GPITEEQMQLFKAAVQCLQAWTPYADKMQIANALLHVIVVPQLAQSGTEA
LNEIVGYSGTSLPLLLSTTKGLMAAFHGASGPDAHSIHHAISEVVCSLSD
GNADELMEQQTEQSREVIRNVIDLLWTCLNAPDKSSFFAAIEGWMAWIAA
DHLMQEDQARLGSERICAVLTVVIRRMESLGFVRDQLNPNLVDCESEEEK
GPVLDLLATGALSIGHHQYLALVSKFLSTDDSMPPTQICAALEAIGASKD
SVEDTNIDEREWNKSKQLLERVLDLAIVRSANGISNDAVFHWQTALQRSA
LSALASHSVLLTRDEKLFHRTAACAANVLLKNEVADRGATLLQSLAEIQP
HSLLPFLGDLITALNQSVSGMSTGAAEQAMYAVANIASLLPVRQERVNAL
EDMVRKPCERLCIAAAGGIEASLNEPVLCRDLTLLSTAMRVYNDHEAVAF
VFQRVREAVFYLARRQCGNGMISKAICSLLEVNTLPTLFDEDDETSGDRA
CFRDEKSRLHLIMAVTKLLGECFKDSGPDGEDVWLKAMTKLIPDLVTGVE
DALGTCDGEPLKCITECVGCAVVGLNMFSGSDYDTQPDMTRMFLKLVSTL
TKRASSALLPVASEISRIAVGTMYCHNVGNVKVSLNFWKALFSRTAGAPL
QQTVLNIANGPNGVCAGALCAARNSRCASDVADVLFAMCRIISGEMDENQ
ILRDCLKAAFSVGSVPKEGLDRNVREMLFRGCYDSAGSKKDFRKALDEVG
RVCGMVTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold