Gchil5542.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil5542.t1 vs. uniprot
Match: A0A2V3J6V5_9FLOR (Transcription elongation factor TFIIS n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6V5_9FLOR) HSP 1 Score: 321 bits (822), Expect = 8.060e-109 Identity = 173/228 (75.88%), Postives = 188/228 (82.46%), Query Frame = 0
Query: 1 MADLNKKLSATKTIDKKAKVSTPRKHLPAEDXXXXXXXXXXXXXKSVGDT-EACKEYDVKHPTGDKMRDKVRILLSDALFNKDEHIVKSKDQAQIVAYAIEHAMFVKFDGNGTSYKQKYRSLSFNLKDPKNGKLRSAVLLRDILPSELIDMSSTDLANDDLRKKRAEVREKMTRDAMPYTQQEASTDRFKCGKCKERKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF 227
MAD+ KKLSATKTIDKK + T K L + XXXXX SV + +YDVKHPTGDKMRDKVR LL+DALF KDE V SKD AQ+VA AIEHAMF+KFDGNG SYKQKYRS+SFNLKDPKNGKLRS VL R I P EL+DMSST+LAND+LRK+RAEV+EKMTRDAMPYTQQ ASTDRFKCGKCK+RKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF
Sbjct: 1 MADVKKKLSATKTIDKKTRPPTTPKILSSAXXXXXXPLDVSPSTVSVPPPPDHDSQYDVKHPTGDKMRDKVRSLLADALFKKDEKHVSSKDDAQLVANAIEHAMFIKFDGNGQSYKQKYRSISFNLKDPKNGKLRSLVLTRQINPQELLDMSSTELANDELRKRRAEVQEKMTRDAMPYTQQAASTDRFKCGKCKQRKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF 228
BLAST of Gchil5542.t1 vs. uniprot
Match: R7QEZ4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEZ4_CHOCR) HSP 1 Score: 266 bits (681), Expect = 2.730e-87 Identity = 138/230 (60.00%), Postives = 167/230 (72.61%), Query Frame = 0
Query: 4 LNKKLSATKTIDKKAKVSTPRKHLPAEDXXXXXXXXXXXXXKS------VGDTEACKEYDVKHPTGDKMRDKVRILLSDALFNKDEHIVKSKDQAQIVAYAIEHAMFVKFDGNGTSYKQKYRSLSFNLKDPKNGKLRSAVLLRDILPSELIDMSSTDLANDDLRKKRAEVREKMTRDAMPYTQQEASTDRFKCGKCKERKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF 227
L KKLSA+K I+KKA+ H+ + K +E EYDV HPT +K+RDK+R LL+DALF KDE VK ++ AQIVA AIE A++ K DGNG YK KYR++SFN+KDPKN KLR A+L R + PSEL++MS+ DLAND+LRK R EVR KMTRDAMP+++QEASTD FKCGKCK+RKCTYYQMQTRSADEPLTTFV+CV+C NRWRF
Sbjct: 5 LEKKLSASKVINKKARSGDVSPHVSRDALKADAAAAATGERKDDSTQNETNSSEFDAEYDVPHPTNEKIRDKIRSLLTDALFKKDEDFVKDRNDAQIVANAIEAALYDKMDGNGAPYKNKYRNISFNIKDPKNAKLRMALLYRHLPPSELLNMSNHDLANDELRKNREEVRAKMTRDAMPFSKQEASTDMFKCGKCKQRKCTYYQMQTRSADEPLTTFVSCVHCGNRWRF 234
BLAST of Gchil5542.t1 vs. uniprot
Match: C1NA42_MICPC (Transcription elongation factor n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1NA42_MICPC) HSP 1 Score: 169 bits (427), Expect = 9.470e-48 Identity = 88/168 (52.38%), Postives = 117/168 (69.64%), Query Frame = 0
Query: 63 GDKMRDKVRILLSDAL---FNKDEHIVKSKDQAQIVAYAIEHAMFVKFDGNGTSYKQKYRSLSFNLKDPKNGKLRSAVLLRDILPSELIDMSSTDLANDDLRKKRAEVREKMTRDAMPYTQQEASTDRFKCGKCKERKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF 227
GD +RD+ R LL++A+ + +D AQ A AIE+AM ++ G YK K+R LSFNLKDPKN LR +V I P+ L+D+S +L +D+ R A++RE T +A+ ++EASTD FKCGKCK+RKCTYYQ+QTRSADEP+TTFVTCVNC+NRW+F
Sbjct: 158 GDPLRDRTRELLAEAIAQAIGAPDVYASVEDVAQ-TAIAIENAMHAQWSDTGKEYKAKFRQLSFNLKDPKNPDLRRSVADGLISPAVLLDLSPEELGSDERRNSNAKIREHATNEAVRGQKKEASTDAFKCGKCKQRKCTYYQLQTRSADEPMTTFVTCVNCDNRWKF 324
BLAST of Gchil5542.t1 vs. uniprot
Match: A0A1X6P3X2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3X2_PORUM) HSP 1 Score: 160 bits (405), Expect = 1.890e-46 Identity = 84/162 (51.85%), Postives = 110/162 (67.90%), Query Frame = 0
Query: 66 MRDKVRILLSDALFNKDEHIVKSKDQAQIVAYAIEHAMFVKFDGN-GTSYKQKYRSLSFNLKDPKNGKLRSAVLLRDILPSELIDMSSTDLANDDLRKKRAEVREKMTRDAMPYTQQEASTDRFKCGKCKERKCTYYQMQTRSADEPLTTFVTCVNCNNRWR 226
MRDKVR L++ AL+ + +V A+ A A+E AMF + G +YK KYR LSFNLKD KN LRS VL D+ P+ L+ MS+ +LAN++ + R EV E M R+A P A+TD F+CGKCK+R+ TY+QMQTRSADEP+TTFV C+ C NRW+
Sbjct: 1 MRDKVRSLIASALYKDTDGLVADLAGAEPAAAAVEAAMFTATGTDVGGAYKSKYRQLSFNLKDAKNVALRSRVLRGDLTPAVLVGMSNEELANEETKAYRKEVAETMLREAQPGGNARATTDMFRCGKCKQRRTTYHQMQTRSADEPMTTFVCCLECGNRWK 162
BLAST of Gchil5542.t1 vs. uniprot
Match: A0A7S2ZFF0_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZFF0_9RHOD) HSP 1 Score: 160 bits (404), Expect = 9.340e-46 Identity = 80/165 (48.48%), Postives = 116/165 (70.30%), Query Frame = 0
Query: 64 DKMRDKVRILLSDALFNKDEHIVKSKDQAQIVAYAIEHAMFVKFDGNGTSYKQKYRSLSFNLKDPKNGKLRSAVLLRDILPSELIDMSSTDLANDDLRKKRAEVREKMTRDAMPY--TQQEASTDRFKCGKCKERKCTYYQMQTRSADEPLTTFVTCVNCNNRWR 226
D +R +V+ +L++AL+ + E V+S ++A +A +E M+ F G +YK K+R+L+FNLKD KN +LRS V+ + P LI MSS +LAN + R+ ++ + R+A Y ++ A+TD FKCGKCK+RKCTYYQ+QTRSADEPLT+FVTC+ CNNRW+
Sbjct: 39 DPVRKRVKEMLANALYKESEGHVESLEKAMEIAVKLELEMYTVFHGTNQAYKDKFRTLNFNLKDEKNERLRSLVVSGAVGPERLITMSSQELANPERRESNTKIEKNNMREAQLYNPSKHAATTDLFKCGKCKQRKCTYYQLQTRSADEPLTSFVTCMVCNNRWK 203
BLAST of Gchil5542.t1 vs. uniprot
Match: A0A7J7PD88_9CHLO (Transcription elongation factor n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PD88_9CHLO) HSP 1 Score: 159 bits (402), Expect = 7.670e-45 Identity = 85/184 (46.20%), Postives = 118/184 (64.13%), Query Frame = 0
Query: 45 KSVGDTEACKEYDVKHPTGDKMRDKVRILLSDALFNKDEHIVKSKDQAQIVAYAIEHAMFVKFDGN-GTSYKQKYRSLSFNLKDPKNGKLRSAVLLRDILPSELIDMSSTDLANDDLRKKRAEVREKMTRDAMPYTQQEASTDRFKCGKCKERKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF 227
KS G +A TGD RD++R LL D L + +D ++ A +E A++ +F+ + G Y K RSLSFNLKDP N LR+ VL + P EL+DM +LA+D R++ ++R++ +A+ Q+ASTD FKCG+CK++KCTYYQMQTRSADEP+TTFVTCVNC +W+F
Sbjct: 70 KSSGSGKASGPLRPPPKTGDGKRDRIRQLLCDGLCLVPDDQRSGQDPGEVAA-EVEAAIYARFNQHTGPEYGAKVRSLSFNLKDPANPDLRARVLQGQVDPQELVDMPPEELASDSKRRENHKIRQEAAAEAVRGQTQQASTDMFKCGRCKQKKCTYYQMQTRSADEPMTTFVTCVNCGQKWKF 252
BLAST of Gchil5542.t1 vs. uniprot
Match: A0A7S0RUH1_9CHLO (Transcription elongation factor n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RUH1_9CHLO) HSP 1 Score: 159 bits (403), Expect = 1.820e-44 Identity = 91/189 (48.15%), Postives = 115/189 (60.85%), Query Frame = 0
Query: 45 KSVGDTEACKEYDV---KHPTGDKMRDKVRILLSDALFNKDEHIVKSKD---QAQIVAYAIEHAMFVKFDGNGTSYKQKYRSLSFNLKDPKNGKLRSAVLLRDILPSELIDMSSTDLANDDLRKKRAEVREKMTRDAMPYTQQEASTDRFKCGKCKERKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF 227
KS D E K K TGD RDK+ + L +AL + + D + +V +IE AMF KF G YK KYRS+SFNLKD +N LR VL DI P L+ +SS +L +D R+ +R+ M R+ ++STD+FKCGKC +RK YYQMQTRSADEP+TTFVTCVNCNNRW+F
Sbjct: 109 KSKADEEVVKSPTTPAAKPNTGDPQRDKLAVSLCEALAVVLGEVGEDADGLAEPSLVGISIEAAMFRKFGGMTKEYKAKYRSISFNLKDSRNPDLRRKVLSGDISPYTLLTLSSEELGSDSKREANEAIRQHMMRECERGQTTQSSTDQFKCGKCGQRKTIYYQMQTRSADEPMTTFVTCVNCNNRWKF 297
BLAST of Gchil5542.t1 vs. uniprot
Match: UPI001CF9CAD6 (transcription elongation factor TFIIS-like n=3 Tax=Anacardiaceae TaxID=4011 RepID=UPI001CF9CAD6) HSP 1 Score: 158 bits (399), Expect = 2.880e-43 Identity = 82/171 (47.95%), Postives = 116/171 (67.84%), Query Frame = 0
Query: 64 DKMRDKVRILLSDALFN-------KDEHIVKSKDQAQIVAYAIEHAMFVKFDGNGTSYKQKYRSLSFNLKDPKNGKLRSAVLLRDILPSELIDMSSTDLANDDLRKKRAEVREKMTRDAMPYTQQEASTDRFKCGKCKERKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF 227
D +RDK+R LL +AL +D H+V + D + VA ++E AMF K + + K KYRS+ FN+KDPKN LR VLL +I P L+ M+ ++A+D +++ +++EK D +A+TD+FKCG+C++RKCTYYQMQTRSADEP+TT+VTCVNCNN W+F
Sbjct: 185 DSLRDKIRELLVEALSKVAGEVDEEDVHVVNACDPIR-VAVSVESAMFDKLGRSNGAQKLKYRSIMFNIKDPKNPDLRRKVLLGEIKPERLVTMTPEEMASDARQQEINQIKEKALFDCERGGAPKATTDQFKCGRCRQRKCTYYQMQTRSADEPMTTYVTCVNCNNHWKF 354
BLAST of Gchil5542.t1 vs. uniprot
Match: A0A2R6XT52_MARPO (Transcription elongation factor n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XT52_MARPO) HSP 1 Score: 155 bits (392), Expect = 3.440e-42 Identity = 85/173 (49.13%), Postives = 117/173 (67.63%), Query Frame = 0
Query: 62 TGDKMRDKVRILLSDALFNK------DEHIVKSKDQAQI-VAYAIEHAMFVKFDGNGTSYKQKYRSLSFNLKDPKNGKLRSAVLLRDILPSELIDMSSTDLANDDLRKKRAEVREKMTRDAMPYTQQEASTDRFKCGKCKERKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF 227
TGD RD++R LL++A F+K D+ + K+K + + VA +E AMF K + + K KYRS+ FNLKD N LR VLL +I P +L+ MS D+A+D + + ++++K + + ASTD+FKCGKCK+RKCTY+QMQTRSADEP+TTFVTCVNCNN W+F
Sbjct: 187 TGDSTRDRIRELLAEA-FSKVLTEAQDDLLQKAKMKDIVHVAVTVESAMFKKLGLSKDANKTKYRSIMFNLKDANNPDLRRRVLLGEIEPEQLMTMSVDDMASDQRKAENKKIKDKALFECERGLKAAASTDQFKCGKCKQRKCTYFQMQTRSADEPMTTFVTCVNCNNHWKF 358
BLAST of Gchil5542.t1 vs. uniprot
Match: A0A090M994_OSTTA (Transcription elongation factor S-II, central domain n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M994_OSTTA) HSP 1 Score: 154 bits (388), Expect = 4.250e-42 Identity = 81/169 (47.93%), Postives = 113/169 (66.86%), Query Frame = 0
Query: 62 TGDKMRDKVRILLSDAL-FNKDEHIVKSKDQAQIVAYA--IEHAMFVKFDGNGTSYKQKYRSLSFNLKDPKNGKLRSAVLLRDILPSELIDMSSTDLANDDLRKKRAEVREKMTRDAMPYTQQEASTDRFKCGKCKERKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF 227
T D RD+ R + +DAL + V++ + ++ A A IE AM K+ G YK K R L+FN++DPKN LR+ + + +I LID++ +L +++ R+ ++RE +A+ QQEASTD FKCGKCK+RKCTYYQ+QTRSADEP+TTFVTCVNC NRW+F
Sbjct: 141 TADAARDRTREIFADALAMCIADGAVEASNAGKLAAIADQIEEAMTAKWPEGGKDYKAKVRQLAFNMRDPKNPDLRTNLAMGEISADVLIDLTPEELGSNERRQANEKIREFAEWEAVRGQQQEASTDAFKCGKCKQRKCTYYQLQTRSADEPMTTFVTCVNCGNRWKF 309 The following BLAST results are available for this feature:
BLAST of Gchil5542.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil5542.t1 ID=Gchil5542.t1|Name=Gchil5542.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=228bpback to top |