Gchil5534.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5534.t1
Unique NameGchil5534.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length490
Homology
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BLAST of Gchil5534.t1 vs. uniprot
Match: A0A2V3J7G5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J7G5_9FLOR)

HSP 1 Score: 325 bits (832), Expect = 5.970e-104
Identity = 190/399 (47.62%), Postives = 266/399 (66.67%), Query Frame = 0 
Query:  105 MVRYLKNWIDVITDQQTLNRFVAVEILLARLHFPVSICFAVGVLAQTGLVPYVAPYEWRLVLIASLFLTITNGRDLHYCIRHFYQSQASEQDTLGSVEIVARKHAPDAGGQMQMLGAFALTLGSVSLLNASIIALIRDNPVSYVVSRRQYAASFALFLVGSGANSVLSGDKAQSLESFRVLICFQNLLAAATLCTASVLLLPEIGVEEKMNHFQTSLLTALSCIGSVMLVMSSLVNYFHAVGYCSLHCEGYNLFV---EQRRSQVGKRSDSMVTWEKVKGLLWSRKNAWWRRRKSH-RKCVQRAVRSSSLEH----------STEEEFQKDAESDDLESNYSSPLTSEFSSSRSLSTVYDEETGSRSSFASEESENEQPTKERHRKSKRDRYLPCAVES 489
            MVR+L++  ++I ++++L+ FVA EI+LARLHFP+++CF++G+LAQTGLVPY AP+EW+ VLIASLFLT+ NGRDL++CIR  +Q++  E+D + S+ +     +  AGG MQ+L AFALTLGSVSLLNASII + RD+  S  + RRQ+A+SFALFL+GSGAN++    KAQ LE  R+L+ FQN+LA+ATL  ASVL+LP IG E+  + FQ SL +ALS IGS++L+MSS+VNYF+ V YC+  CE    F       +++VG +   ++TWE+VK L WS ++ WW+RRK   RK ++R   ++ ++           S   EF+ D+ S  L  + SS   S FSS      +YDEE G  SS  S    +E  T ER  +S   R +P    S
Sbjct:    1 MVRFLRSCFEIIDNKKSLDWFVASEIMLARLHFPIAVCFSIGILAQTGLVPYAAPHEWKFVLIASLFLTLANGRDLNHCIRALFQTEPREEDAVTSLGLTTWNDSGSAGGHMQLLSAFALTLGSVSLLNASIIGIARDSEGSSNICRRQFASSFALFLIGSGANNIPVNKKAQRLECTRILVGFQNILASATLSVASVLMLPGIGGEKTTSSFQLSLTSALSGIGSILLIMSSIVNYFYTVAYCTRQCEYLESFCLAHAHEKAEVGAKRRRLMTWERVKSLFWSGRSNWWKRRKPVVRKRLRRNASNNRIDQYDPGGTRIILSESSEFEMDSSSSLLSRSASSSSYSSFSS------LYDEEQGRESSDGSI---SEHSTPERRGRSAHGRDMPRRAHS 390
The following BLAST results are available for this feature:
BLAST of Gchil5534.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J7G5_9FLOR5.970e-10447.62Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 428..464
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 412..427
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 412..489
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 465..489
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 283..305
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..217
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 218..240
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 343..489
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 252..271
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 306..316
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 241..251
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 272..282
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 317..342
NoneNo IPR availableTMHMMTMhelixcoord: 321..343
NoneNo IPR availableTMHMMTMhelixcoord: 218..240
NoneNo IPR availableTMHMMTMhelixcoord: 255..272
NoneNo IPR availableTMHMMTMhelixcoord: 135..157
NoneNo IPR availableTMHMMTMhelixcoord: 284..306

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:2348712..2350181 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5534.t1Gchil5534.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 2348712..2350181 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5534.t1 ID=Gchil5534.t1|Name=Gchil5534.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=490bp
MADSREPSPSPVWCSAVFRGTSTLRFPALCLSFFKRTTATRISVSSPQRL
ASAGSICLHINETWISLRIRLASCLSLHLNCTADFFPTRIANAKTLMLLS
QFRSMVRYLKNWIDVITDQQTLNRFVAVEILLARLHFPVSICFAVGVLAQ
TGLVPYVAPYEWRLVLIASLFLTITNGRDLHYCIRHFYQSQASEQDTLGS
VEIVARKHAPDAGGQMQMLGAFALTLGSVSLLNASIIALIRDNPVSYVVS
RRQYAASFALFLVGSGANSVLSGDKAQSLESFRVLICFQNLLAAATLCTA
SVLLLPEIGVEEKMNHFQTSLLTALSCIGSVMLVMSSLVNYFHAVGYCSL
HCEGYNLFVEQRRSQVGKRSDSMVTWEKVKGLLWSRKNAWWRRRKSHRKC
VQRAVRSSSLEHSTEEEFQKDAESDDLESNYSSPLTSEFSSSRSLSTVYD
EETGSRSSFASEESENEQPTKERHRKSKRDRYLPCAVES*
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