Gchil5519.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5519.t1
Unique NameGchil5519.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length1467
Homology
BLAST of Gchil5519.t1 vs. uniprot
Match: A0A2V3J8L6_9FLOR (FANCI_S2 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J8L6_9FLOR)

HSP 1 Score: 1508 bits (3905), Expect = 0.000e+0
Identity = 821/1469 (55.89%), Postives = 1070/1469 (72.84%), Query Frame = 0
Query:    8 DVIGNVVRTFESDASTDAVESLLRSMQSTTITLIIGSIRNPPSHISPIRLLRALWSVSTLRPTILTNLSEAMSPKFTQVDASLLEEVDFLLVADARNSNRSHERRLKDISLCASSIAKQSKEVYSPVYGPLLVYCARAASMVSTLQARDVRTKILQFLLISMCDDENIAVQAVIALLENELGIADEEEKVMMNIILRFVSTNCLDGDLPDVLRAILFSLTKTNSSHKTYVLSWLVFVIIRRATGDVLGEVINVVDVMVLDSEVVCDRIATAFWSIITYSSREGHSSQKRFRFSPSHIAVLYCILSDASTEAQQEYLYHILERILLDPSVSFDISTAASSSASAGDVEFRRKATFVESIKIPGVQNRSQTIVEFYENLLWKSKKLQDWGSMMLLELFAWVAESRRSILNNIFGTIVQTEATDDVVNAFCTLYERITITPRSAFALRDCQGVLKEALELVSLLPAPYDYRVLKASVPIFVTCPNLTDFMLMYLRKASGSRSRKFQIIACTGLLTILEQDFISKETAEACCATLKLMMQTSDNTVKSYLITYVLKFLRRKPRHAGRISDLSALLMKQFMVVLERPDGSSKEKDCTNPIDCSSGRPHISLNLANCFGEIYGEYILREPVSLLAKFCFTFSAREERMDKYMKLYITYLGNPSGALSDACLVSTSKAPILPRVKTLSEQFDVLFGTGSVAVGLSHCLAYGLCLIIRDHLDGR-SPSGKSNDERSKRNLGQPPQFASMTAREAASKLHSYTLQSMLTESITFRERLEALKITARIQDNDEVTVFLKKKICSEVLRRLQLDLKADLLGDRERLPKEKDVQDMVLVLCSLYCANCPWLMQRDSETGQENIPDVRRQTDTA--------ICSTNSGSSEGEQDPHRVTSSIVFQKLLSHSHLSNDIRSVLEPRQLLVLGPSLSIAVRHSVLSILITLYSYGCLKNEMKVFVQLLRPVAIKGDKTLKEGQSDKSSLAHQKEDLSN-DEMSASVEDVVHLVLKTIRLEFANSMSVGLTLSYLELVSLIIEIVRGKGEACLKRIGAQVFTAITDILREYSVRHATVLREMLRLCLKCLETRAAMEFIQRILVWLGNSSSLLNSRFSVEDFDDNNLNVVDFDPDIVAEGRALDAEFSDGEERDDASC--TRPSTSDLQNAAQLETHTAENRASKPEDDDRSETTEADAPHSTQESGSSMPEGKSVTSLCLDETAEVGLLSIVTVLGYCQGIVNHEVRKNRMIVKEGKDSDSTSSSSERCCSARIASILRDFCNTSFAKLVSPKQRAWPDVLVKKVDYILLGLLEYAELKLRFAVRSARRGSSAERCTSMFRAALSTLQSLYDESASKSSVFATTKAMSRLNKASLEEKLKTTSLEVSQVVREKPEAFDENTSRDWKAVVKNLNKD-SNASISRALGTLGKEGSEGVSEHLRVSHPRKRQRLRSRNSGIDDWLQDERGDDNFADLEDFIVPMDA 1463
            DVI  +V  FES +STDA E  LRS+ S TI+ +I SIR+PPS +S  RLLRALWS + LRPTILT L+EA++ KFT  D+ LLEE+DFLLVADAR++ R H+ R+KDIS CA++IA+ S+++YSP++GP+LVYCARAAS+V+T+QARDVRTKILQFLL+SM  ++ IAVQAVIALLENE+ I DEEEK+MMNI+LRFVST C + DLPDVLRAIL+SL+KT+SS K +VLSWLVFV I+R++ D L +VINV+DVMVLDS+VVC+RIATAFWS++ YS+R   +S+K FRFSPSHIAVLYCILSDAS+E Q EYLY+ILERIL+DP++SFDISTAASSS+SA D +FRRKA FVESIKI  VQNR QTI+EFYE+LLWKSK  Q+WGS MLLELF WV ESRRSILN IFGTIVQ+E  + +++AFCTLYERI  TPRSAF LR+CQGVLKEALEL+SLLPA YD R+LKASVPIFVTCP+L+D ML++LRKA+ SRSRK+QIIACTGLLT L Q  +S +    CC TL+LMM+T+D TVKS+LI ++L+F+ RKP ++ R   L  +L+  F  + +R    +K  + +      S +    L+L NCFGE  GEY+L+EPV LLAKFC +    ++++  +M+ +I YLG+ +G LSDA L   SK P+LPRVKTL +  D+L  + S +VG  H  AYG+ LI+RD+L+G+ S   KSN E  K       QFAS+ AREA+  LH+ + Q ML+++ TFRERL+ALK      ++DE+T  LKKK+CSE+LRRL++D+K  LL D E+ PK ++V++MV VL SLY  NC W +   +     +  +   +++          I S +    +  Q+P       ++  LLSH HL  D+R  +E R +   GPSL I +R++ LS+LI L SYG + +E++ F +LL P A   D  + + +S ++  A   +D +  D+   + + VV ++L  +RLEFANSMSVGLTL+Y+EL++  ++ +R K E   +  G QVF+AITDILREYSVRH TVLREMLRLCL+CL+  AAM+FI+ +L+WLGNSSSL+NS+FS +D +D  LNV+DFD DIVAEG ALD   SD E+ DD     TR S  + ++      H           D    T +   P   Q   S   E K++TSLCLDETAEVGL+SIVT LG+CQ ++ HEV+++R + KE ++        E C S  IASIL+DFC+TSFAKLVSPKQ+AWP VLV+K+DYI+LGL+E AE+KLR  +++ RR S+  R   +F+ A+  LQ+LYDE+A +SSVFA   A SRLNK S EE+LK TS+EVSQV+R+K E  DE+T ++WKAVVK LNK  +N +I + LG + K+ S   ++H+ VSHPRKRQRLRSRNSGID WLQ+ERGDD+FADLEDFIVPMDA
Sbjct:    8 DVITGIVHAFESGSSTDATELFLRSLPSATISSVIRSIRSPPSSVSSTRLLRALWSAAPLRPTILTTLAEAVASKFTNADSYLLEEIDFLLVADARDTARGHDVRVKDISTCATAIARHSRDIYSPIHGPILVYCARAASIVNTIQARDVRTKILQFLLMSMQSEQTIAVQAVIALLENEIDIDDEEEKIMMNIVLRFVSTQCTESDLPDVLRAILYSLSKTSSSQKAHVLSWLVFVSIQRSSRDTLTDVINVIDVMVLDSDVVCERIATAFWSVLNYSNRGDAASRKNFRFSPSHIAVLYCILSDASSEGQHEYLYYILERILVDPAISFDISTAASSSSSASDEDFRRKAVFVESIKILAVQNRCQTILEFYESLLWKSKNFQEWGSTMLLELFVWVPESRRSILNVIFGTIVQSETAEHILDAFCTLYERIATTPRSAFVLRECQGVLKEALELISLLPATYDCRILKASVPIFVTCPSLSDSMLIFLRKAASSRSRKYQIIACTGLLTFLSQQVVSDDVVRGCCETLQLMMETTDVTVKSHLIIHLLRFIERKPEYSTRTKSLDEVLLNHFKSMYQRQAKHTKSSESSTNKQIGSTQDENLLDLTNCFGEFCGEYVLKEPVCLLAKFCLSKQCDDKKIQHFMERHIAYLGSHTGGLSDATLHGRSKVPVLPRVKTLCDLLDILLSSASGSVGEQHLSAYGISLIVRDNLEGKTSLHSKSNGEVLKAGSNLLVQFASVAAREASFGLHNSSSQPMLSDAFTFRERLKALKAVEHKTEDDEITRILKKKVCSEILRRLRVDMKDGLLEDPEKFPKRQEVKEMVDVLGSLYTENCSWRLTHLTVPSLSSHLEALDESNHCNGGHSPEKILSVSKKDDDSTQEPRTAG---LYHHLLSHVHLPADVRKAIEVRNIQNQGPSLCITIRNAALSVLICLCSYGYIADELQTFSELLAPFA---DLHVVKSRSAEAKRAETSKDCTPADQWVKTADRVVCILLNIVRLEFANSMSVGLTLTYMELIAFFMQTIRTKREDYFREAGTQVFSAITDILREYSVRHVTVLREMLRLCLQCLDRTAAMDFIRGVLIWLGNSSSLINSQFSRDDVEDEKLNVMDFDADIVAEGVALDTRHSDREKGDDEEPDDTRRSAQEKKDEVXXXXHXXXXXXXXXXXDKHGATEKQSDPRRFQTLPSLSSESKTITSLCLDETAEVGLVSIVTFLGHCQSVIAHEVQEHRFLTKEEREVVPLLHRVEGCDSVHIASILKDFCSTSFAKLVSPKQQAWPGVLVRKIDYIVLGLIECAEIKLRLVLKAIRRESAGRRLKPLFQDAVCILQNLYDETA-ESSVFAAENATSRLNKTSQEERLKNTSVEVSQVIRDKMETLDESTLKEWKAVVKGLNKGGTNRAIGKTLGAITKDAS---ADHVHVSHPRKRQRLRSRNSGIDGWLQEERGDDDFADLEDFIVPMDA 1466          
BLAST of Gchil5519.t1 vs. uniprot
Match: R7QLZ6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLZ6_CHOCR)

HSP 1 Score: 260 bits (664), Expect = 3.670e-67
Identity = 299/1257 (23.79%), Postives = 536/1257 (42.64%), Query Frame = 0
Query:  266 LDSEVVCDRIATAFWSIITYSSREGHSSQKRFRFSPSHIAVLYCILSDASTEAQQEYLYHILERILLDPSVSFDISTAASSSASAGDVEFRRKATFVESIKIPGVQNRSQTIVEFYENLLWKSKK-LQDWGSMMLLELFAWVAESRRSILNNIFGTIVQTEATDDVVNAFCTLYERITITPRSAFALRDCQGVLKEALELVSLLPAPYDYRVLKASVPIFVTCPNLTDFMLMYLRKASGSRSRKFQIIACTGLLTILEQDFISKETAEACCATLKLMMQTSDNTVKSYLITYVLKFLRRKPRHAGRISDLSALLMKQFMVVLERPDGSSKEKDCTNPIDCSSGRPHISLNLANCFGEIYGEYILREP----------VSLLAKFCFTFSAREERMDKYMKLYITYLGNPSGALSDACLVSTSKAPILPRVKTLSEQFDVLFGTGSVAVGLSHCLAYGLCLIIR--DHLDGRSPSGKSNDERSKRNLGQPPQFASMTAREAASKLHSYTLQSMLTESITFRERLEALKITARIQDNDEVTVFLKKKICSEVLRRLQLDLKADLLGDRERLPKEKDVQDMVLVLCSLYCANCPWLMQRDSETGQENIPD--------VRRQTDTAICSTNSGSSEGEQDPHRVTSSI-VFQKLLSHSHLSNDIRSVLEPR----QLLVLGPSLSIAVRHSVLSILITLYSYGCLKNEMKVF---VQLLRPVAI-------------KGDKTLKEGQSDKSSLA----HQKEDLSNDEMSAS-------VEDVVHLVLKTIRLEFANSMSVGLTLSYLELVSLIIEIVRGKGEACL--KRIGAQVFTAITDILREYSVRHATVLREMLRLCLKCLETRAAMEFIQRILVWLGNSSSLLNSRFSVEDFDDNNLNVVDFDPDIVAEGRALDAEFSDGEERDDASCTRPSTSDLQNAAQLETHTAENRASKPEDDDRSETTEADAPHSTQESGSSMPEGKSVTSLCLDETAEVGLLSIVTVLGYCQGIVNHEVRKNRMIVKEGKDSDSTSSSSERCCSARIASILRDFCNTSFAKLVSPKQRAWPDVLVKKVDYILLGLLEYAELKLRFA-VRSARRGSSAERCTSMFRAALSTLQSLYDESASKSSVFATTKAMSRLNKASLEEKLKTTSLEVSQVVREKPEAFDENTSRDWKAVVKNLNKDSNASISRALGTLGKEGSEGVSEHLRV---SHPRKRQRLRSRNSGIDDWLQDERGDDNFADLEDFIVPMDA 1463
            +DSEVV  R+  A   ++   +     +  + +  P H++++  +LS  ++++ ++ ++ I ERI     V FD S   SSSA+  +  F     F+   +IP V    +T+   +E  +W  ++ ++  G  ML E+F  V  SR+ IL  I   +   +    V +AFC L E+I     +A  LR     L   L     +P   D+RV+ A   + V  P  +D ++ +LRKA+GSR  K Q IA  G L ++E D I +ET E        ++  S+  +++YLI  +L+++ R   H  RI  ++        +V++    SS E  C+    C       +          +G+    EP           +LL + C    A    +  +   +  YL +    L D       +   + RV  + E +     + +      +   Y +CL+IR  +  + RS +   +++R  R+ G      S++AREA +   S   ++ +T +++F+E +E ++  A    N    V L++ +  E +  +   ++   L  R  L + +    ++    + + +  PW     + T  E+ P+         R +   A   ++   S     P      + V   +LS + ++ +I+S  +      QL  L  SL +++R S +++LI         + + +    +Q  RP+ I              G +T  E  + + + A    H K+   N +++ S       +     ++ +  RLEF + +SV LTLSY +L    I + +  G+ C   K+  A + + ++ +LR++S+R +TVLR ML L L C +    +EF   ++  L +  +L + R  V       +   DFD DI+ E   LD E       D+ +  RP     Q+A  L     +N  S+ +                 E+G   P+  S+ +LCL ET +  ++SI  VL Y    V H + + R      K        SE   +  +   LR+     F +   PK      +L +++  I+  L E+ E+++R        +         +       L+ L++E   K ++ +      R     L+E+L  T+   + V+  + EA    T       +  L ++    I        ++    V  H+R    S P+KR   RSRN  +D WL++E GDDN+ DLEDFIVP++ 
Sbjct:    1 MDSEVVASRLVDALSHLVQLQTTGETLTCTQPKVGPPHVSLILSLLSSTASQSVEKRIHDIFERIATPGVVRFDNSQVPSSSAATSEPPFVSALRFIARKQIPAVWAHGETLACVFEGQVWSEQESIRSCGMRMLFEVFLLVPRSRKKILRAILVALTNEDTPQLVTDAFCHLLEQICGARETAIHLRAYALDLHALLNFADAIPMRADWRVVTAIARLSVDNPQQSDRVISFLRKAAGSRLLKLQRIAGAGFLALIEHDAIPEETREEVLIAFADILALSETPLRNYLIQMMLEYVDRNGSHPPRIRAIAD-------IVVQHVRNSSME--CSF---CDRKSMQAATGKGTEKPVAFGQSTFLEPHFGLCCSGFDAALLMRLCRRIGAHHSPLASFYWDFGEYLCDVKQVLKDIYSKPEKQGSTIDRVTKVCELYQTRICSDTSRSSERYLSGYAVCLLIRAVEESNNRSETSSRHNKRYARSNGSFAVLGSVSAREAVAMGLSEAFKNNITGAVSFKECIEGMRWLA----NASANVLLRRILFREFMSIVGSRIRQPALLPRLTLEETETFAGLIK---NWFISTSPW-----ATTESEHSPESPCSANAHTRAEDWQATLLSSKKQSSFSAHPWDCKECVDVATHILSEAGIA-EIQSAWDSETAVSQLTKLSTSLRLSIRSSCMTLLIRTIQDWSPADRLALLHSILQAARPLEIVEAASDSTNHAQGSGKQTDSEFDTSECNPAVKEIHSKDMDCNSQVNGSHSPEGLKILQSTTVLSRVFRLEFQHGISVALTLSYFDLF---IWLRKEAGDDCESEKQTRAIIVSTMSGLLRDFSIRQSTVLRRMLSLLLDCFDVLQGIEFATVVVRCLRDGIALDDRRGEVI----GTIGTQDFDADIIEEAINLDIEMRG---IDNTNVCRPKH---QDAGHLSLTNKQNLGSEQD-----------------EAG---PDTDSIRTLCLGETEDNAVMSIFCVLEYLSRTVRHVLERRRRT----KSKSYVPPESELTSTRGVVGALRELFVAPFMRFSVPKTNQTMLLLWRRLGVIMQSLTEFVEIQIRLLPTHMCAQQEPGHPFRGLLDLVQDVLKLLFEEGHLKWTLSSPQLIEQRPRSVLLQERLDATA--TAFVLCHEIEASPSLTG------ILLLLQERVKDIGSLKRNANEKSKNWVGVHVRPDFQSRPKKRAHFRSRNRYVDGWLREENGDDNYVDLEDFIVPLEG 1187          
The following BLAST results are available for this feature:
BLAST of Gchil5519.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J8L6_9FLOR0.000e+055.89FANCI_S2 domain-containing protein n=1 Tax=Gracila... [more]
R7QLZ6_CHOCR3.670e-6723.79Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1353..1373
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1179..1195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1160..1178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1142..1159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1130..1195
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 693..716
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..692
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 913..938
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 717..912
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 939..1466
IPR029315FANCI solenoid 2 domainPFAMPF14676FANCI_S2coord: 389..518
e-value: 5.7E-10
score: 39.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:2279520..2283920 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5519.t1Gchil5519.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 2279520..2283920 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5519.t1 ID=Gchil5519.t1|Name=Gchil5519.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=1467bp
MASPDTADVIGNVVRTFESDASTDAVESLLRSMQSTTITLIIGSIRNPPS
HISPIRLLRALWSVSTLRPTILTNLSEAMSPKFTQVDASLLEEVDFLLVA
DARNSNRSHERRLKDISLCASSIAKQSKEVYSPVYGPLLVYCARAASMVS
TLQARDVRTKILQFLLISMCDDENIAVQAVIALLENELGIADEEEKVMMN
IILRFVSTNCLDGDLPDVLRAILFSLTKTNSSHKTYVLSWLVFVIIRRAT
GDVLGEVINVVDVMVLDSEVVCDRIATAFWSIITYSSREGHSSQKRFRFS
PSHIAVLYCILSDASTEAQQEYLYHILERILLDPSVSFDISTAASSSASA
GDVEFRRKATFVESIKIPGVQNRSQTIVEFYENLLWKSKKLQDWGSMMLL
ELFAWVAESRRSILNNIFGTIVQTEATDDVVNAFCTLYERITITPRSAFA
LRDCQGVLKEALELVSLLPAPYDYRVLKASVPIFVTCPNLTDFMLMYLRK
ASGSRSRKFQIIACTGLLTILEQDFISKETAEACCATLKLMMQTSDNTVK
SYLITYVLKFLRRKPRHAGRISDLSALLMKQFMVVLERPDGSSKEKDCTN
PIDCSSGRPHISLNLANCFGEIYGEYILREPVSLLAKFCFTFSAREERMD
KYMKLYITYLGNPSGALSDACLVSTSKAPILPRVKTLSEQFDVLFGTGSV
AVGLSHCLAYGLCLIIRDHLDGRSPSGKSNDERSKRNLGQPPQFASMTAR
EAASKLHSYTLQSMLTESITFRERLEALKITARIQDNDEVTVFLKKKICS
EVLRRLQLDLKADLLGDRERLPKEKDVQDMVLVLCSLYCANCPWLMQRDS
ETGQENIPDVRRQTDTAICSTNSGSSEGEQDPHRVTSSIVFQKLLSHSHL
SNDIRSVLEPRQLLVLGPSLSIAVRHSVLSILITLYSYGCLKNEMKVFVQ
LLRPVAIKGDKTLKEGQSDKSSLAHQKEDLSNDEMSASVEDVVHLVLKTI
RLEFANSMSVGLTLSYLELVSLIIEIVRGKGEACLKRIGAQVFTAITDIL
REYSVRHATVLREMLRLCLKCLETRAAMEFIQRILVWLGNSSSLLNSRFS
VEDFDDNNLNVVDFDPDIVAEGRALDAEFSDGEERDDASCTRPSTSDLQN
AAQLETHTAENRASKPEDDDRSETTEADAPHSTQESGSSMPEGKSVTSLC
LDETAEVGLLSIVTVLGYCQGIVNHEVRKNRMIVKEGKDSDSTSSSSERC
CSARIASILRDFCNTSFAKLVSPKQRAWPDVLVKKVDYILLGLLEYAELK
LRFAVRSARRGSSAERCTSMFRAALSTLQSLYDESASKSSVFATTKAMSR
LNKASLEEKLKTTSLEVSQVVREKPEAFDENTSRDWKAVVKNLNKDSNAS
ISRALGTLGKEGSEGVSEHLRVSHPRKRQRLRSRNSGIDDWLQDERGDDN
FADLEDFIVPMDAIDQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029315FANCI_S2