Gchil5510.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5510.t1
Unique NameGchil5510.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length308
Homology
BLAST of Gchil5510.t1 vs. uniprot
Match: A0A2V3IDX8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDX8_9FLOR)

HSP 1 Score: 203 bits (517), Expect = 3.470e-60
Identity = 135/328 (41.16%), Postives = 179/328 (54.57%), Query Frame = 0
Query:    1 MSFFSATLSIALFALLCSPSQAAEGFIGPCRINADCANGRVCRE--VDFENISIL-------------SGLSLDSIKNAVKDDCGREPKYCVCLPESGDSDLTICSGNDKCLDVEVCRRDEEQGICISKTQNEAILAIQEKAEADESSSAVCGTLLSQCP-----SERQCVG-SPVGFCLAKLPPPSDANAGANADGGQSTSENDAESGDQGDDSSEVCIAAKSLAHLDRNHLIYRNHVSARVLCDSFQSCATAGHMVRYRGNVMMMKSYCRLIGGCTRSIMHVNSPRYRRALQIPSDTPHLTFTAFAARYVTSAEEHVLRTAVRLGL 307
            M+  +A + +   + L   + AA G + PCR +++CA  R CR   +D  +IS +             SG  L +I  ++   C R+  YC+C+P   D DL  CS +  C D E C  D     C++ +Q EA  A + K+        V  T+ ++       S  +  G    GFCLA+     +++                         SE+CIA KSL HL  + L+YR H++ARVLCD+  SCATAGHMVR+RG  MMMKSYC L+G C RSI  VNSPRY RALQIPSD+P LTFTAFAARY T+AEEHVLRTAV +GL
Sbjct:    1 MNLMTARIVLVSLSALAVSAFAAGGNLAPCRSDSNCAGERSCRAFALDLSSISTIFQSAQSEDLENPDSGTVL-AILQSITQSC-RDEDYCLCVPT--DEDLIGCSSDSDCSDGEECLADN----CVADSQLEA--AKEPKSCXXXXXXTVPDTICAKLTAGLLDSLAETFGFEDNGFCLARF---KESSTSGKPGSXXXXXXXXXXXXXXXXXXSEICIAVKSLRHLQPHQLVYRKHMTARVLCDTHGSCATAGHMVRFRGRAMMMKSYCELVGNCERSITLVNSPRYTRALQIPSDSPDLTFTAFAARYATTAEEHVLRTAVHIGL 315          
BLAST of Gchil5510.t1 vs. uniprot
Match: A0A2V3IQ05_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ05_9FLOR)

HSP 1 Score: 141 bits (355), Expect = 8.600e-37
Identity = 70/113 (61.95%), Postives = 83/113 (73.45%), Query Frame = 0
Query:  195 SEVCIAAKSLAHLDRNHLIYRNHVSARVLCDSFQSCATAGHMVRYRGNVMMMKSYCRLIGGCTRSIMHVNSPRYRRALQIPSDTPHLTFTAFAARYVTSAEEHVLRTAVRLGL 307
            S+VCIAA+SLAHL +  L+Y  H  ARVLCDS  SCAT GH+V + G  MMM SYC  +  C   IMHVNSPRY RA+++PS T  L FTAFAARY T+ EEH+L TA+RLGL
Sbjct:  142 SDVCIAARSLAHLSQRDLVYARHRVARVLCDSSGSCATPGHIVLFHGVPMMMTSYCEAVS-CVAKIMHVNSPRYTRAVRVPSLTDGLQFTAFAARYQTTTEEHLLATAIRLGL 253          
BLAST of Gchil5510.t1 vs. uniprot
Match: A0A2V3IN45_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN45_9FLOR)

HSP 1 Score: 140 bits (353), Expect = 7.920e-36
Identity = 105/311 (33.76%), Postives = 143/311 (45.98%), Query Frame = 0
Query:   21 QAAEGFIGPCRINADCANGRVCREVDFENISILSGLSLDSIKNAVKDDCGREPKYCVCLPESGDSDLTICSGNDKCLDVEVCR----------RDEEQGICISKTQNEAILAIQEKAEADESSSAVCGTLL--SQCPSERQCVG------SPVGFCLAKLPPPSDANAGANADGGQSTSENDAESGDQGDDSSE------VCIAAKSLAHLDRNHLIYRNHVSARVLCDSFQSCATAGHMVRYRGNVMMMKSYCRLIGGCTRSIMHVNSPRYRRALQIPSDTPHLTFTAFAARYVTSAEEHVLRTAVRLGL 307
            QAA      CRI +DC     C       ISI S             DC +   YC CLP++       C         E C           +  +  +C+  +Q + +      + A   S A C T+L  S C +            +P      ++P  +   A  + +        D    +Q +D  +      VCIAAKSL HL  N L+Y  H+ ARVLCD+ QSCAT GHMV Y G  MMM++YC+L+  C  ++M VNS RY+   ++ S T  L+F AFAARY T  EEH+LRTAVR+GL
Sbjct:   27 QAASNSFARCRIQSDCTPNLQC-------ISINSST-----------DCSQTSSYCACLPQTIQQ--ATCXXXXXXXXXETCIPVPGRVSSVIKFPDVSVCVHNSQMDFVDLTPCSSVAGCPSHATCVTILFFSFCAASSSAEPPITQSPAPEPSLEPEIPDSTPVAAPLHLEQDSPKQTEDGRDQEQREDQPDDIDGVPVCIAAKSLQHLPENMLLYSKHIPARVLCDAQQSCATPGHMVLYNGRPMMMRTYCQLVQ-CRSAVMPVNSVRYQWRWRLDSHTHGLSFLAFAARYQTRVEEHMLRTAVRVGL 316          
BLAST of Gchil5510.t1 vs. uniprot
Match: A0A2V3IFS2_9FLOR (U1 small nuclear ribonucleoprotein 70 kDa n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFS2_9FLOR)

HSP 1 Score: 142 bits (359), Expect = 4.180e-35
Identity = 69/111 (62.16%), Postives = 83/111 (74.77%), Query Frame = 0
Query:  197 VCIAAKSLAHLDRNHLIYRNHVSARVLCDSFQSCATAGHMVRYRGNVMMMKSYCRLIGGCTRSIMHVNSPRYRRALQIPSDTPHLTFTAFAARYVTSAEEHVLRTAVRLGL 307
            VCI A +LAH  RN L+Y NH  ARVLCD++ SCAT GHMV Y G  MMM SYCRL   CT+ +M+VNSPRY RAL+IPS++P L FTA AARY T  EE+++  A+RLGL
Sbjct:  421 VCIDANALAHFPRNSLLYANHQMARVLCDTYASCATHGHMVYYLGKPMMMSSYCRLTQ-CTQQLMYVNSPRYSRALRIPSNSPQLQFTALAARYATDIEENLMSLAIRLGL 530          
BLAST of Gchil5510.t1 vs. uniprot
Match: R7Q4J5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4J5_CHOCR)

HSP 1 Score: 126 bits (317), Expect = 2.260e-32
Identity = 60/111 (54.05%), Postives = 78/111 (70.27%), Query Frame = 0
Query:  197 VCIAAKSLAHLDRNHLIYRNHVSARVLCDSFQSCATAGHMVRYRGNVMMMKSYCRLIGGCTRSIMHVNSPRYRRALQIPSDTPHLTFTAFAARYVTSAEEHVLRTAVRLGL 307
            VCI A +L HL  + L+Y  HVS+RVLCD+F SCAT GH+VRY G  MMMK+YCR++  C   I+ VNSPRY   +++PS T  L +T+FAARY +  EE  +  AVR+GL
Sbjct:   44 VCIDAAALQHLQTHELVYSRHVSSRVLCDAFGSCATQGHIVRYAGKAMMMKNYCRIVE-CEERIIKVNSPRYSIGMRVPSKTDGLEYTSFAARYESVVEEAAIAAAVRMGL 153          
BLAST of Gchil5510.t1 vs. uniprot
Match: A0A2V3J1H7_9FLOR (Early nodulin-12A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1H7_9FLOR)

HSP 1 Score: 127 bits (318), Expect = 2.600e-29
Identity = 62/112 (55.36%), Postives = 77/112 (68.75%), Query Frame = 0
Query:  196 EVCIAAKSLAHLDRNHLIYRNHVSARVLCDSFQSCATAGHMVRYRGNVMMMKSYCRLIGGCTRSIMHVNSPRYRRALQIPSDTPHLTFTAFAARYVTSAEEHVLRTAVRLGL 307
            E+CI    L+H+    LIY +H  ARVLCD   SCAT GH+V Y+G  MMM+ YC  I  C + IM VNSPRY RA ++ S T  L+FTAFAARY ++AEEH+LR  VR+GL
Sbjct:  441 EICIGVHHLSHMAYKDLIYSSHRVARVLCDKSSSCATPGHIVLYKGEAMMMRKYCT-ITRCVQKIMRVNSPRYSRAARVDSHTEDLSFTAFAARYESAAEEHLLRAFVRIGL 551          
BLAST of Gchil5510.t1 vs. uniprot
Match: R7Q6G8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6G8_CHOCR)

HSP 1 Score: 116 bits (290), Expect = 2.630e-28
Identity = 59/111 (53.15%), Postives = 79/111 (71.17%), Query Frame = 0
Query:  197 VCIAAKSLAHLDRNHLIYRNHVSARVLCDSFQSCATAGHMVRYRGNVMMMKSYCRLIGGCTRSIMHVNSPRYRRALQIPSDTPHLTFTAFAARYVTSAEEHVLRTAVRLGL 307
            +C+ A++L + D   ++YR H  A+VLCDS +SCATA HMV +RG  MMM+SYC+ +  C  + +HVNSPRY++ ++I S T  L FTAFAARY T AEE  +  AVRLGL
Sbjct:   51 LCVDAEALTNADVQ-MVYRKHFYAKVLCDSERSCATAAHMVVWRGVAMMMRSYCQRVQ-CEETALHVNSPRYKKKVRIQSRTEGLQFTAFAARYGTKAEELAIGVAVRLGL 159          
BLAST of Gchil5510.t1 vs. uniprot
Match: R7Q9R8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9R8_CHOCR)

HSP 1 Score: 117 bits (293), Expect = 4.700e-27
Identity = 62/118 (52.54%), Postives = 76/118 (64.41%), Query Frame = 0
Query:  190 QGDDSSEVCIAAKSLAHLDRNHLIYRNHVSARVLCDSFQSCATAGHMVRYRGNVMMMKSYCRLIGGCTRSIMHVNSPRYRRALQIPSDTPHLTFTAFAARYVTSAEEHVLRTAVRLGL 307
            QGD  S VCI A +L H+    LI+ +H  ARVLCD + SCATAGHMV+  G  MMM ++CR +G C    M VNSP+YRR   I S T  L +TAFAARY +  EE ++  AVR GL
Sbjct:  208 QGDPES-VCIDANALKHVAPRELIFESHRWARVLCDEYGSCATAGHMVKSEGKAMMMGTFCRYVG-CVEKAMMVNSPKYRRGASIRSKTKGLVYTAFAARYQSRVEELIIAAAVRWGL 323          
BLAST of Gchil5510.t1 vs. uniprot
Match: A0A2V3ISB7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISB7_9FLOR)

HSP 1 Score: 110 bits (275), Expect = 6.960e-25
Identity = 56/113 (49.56%), Postives = 74/113 (65.49%), Query Frame = 0
Query:  195 SEVCIAAKSLAHLDRNHLIYRNHVSARVLCDSFQSCATAGHMVRYRGNVMMMKSYCRLIGGCTRSIMHVNSPRYRRALQIPSDTPHLTFTAFAARYVTSAEEHVLRTAVRLGL 307
            ++ C+A K L  L+RN L++  H + +VLCD   SCATAGH+V YRG  M MKSYC+ +G C+ ++M VNSPRY   L++ S +  L  T FAAR+ T  EE  L   VRLGL
Sbjct:  163 ADACVAVKHLQELERNELLFATHRTTKVLCDGKLSCATAGHIVVYRGLPMSMKSYCQHVG-CSMNMMEVNSPRYVWGLRMKSHSVELQLTVFAARFETMVEEAFLVCLVRLGL 274          
BLAST of Gchil5510.t1 vs. uniprot
Match: A0A2V3IE72_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE72_9FLOR)

HSP 1 Score: 100 bits (248), Expect = 3.940e-22
Identity = 51/111 (45.95%), Postives = 67/111 (60.36%), Query Frame = 0
Query:  197 VCIAAKSLAHLDRNHLIYRNHVSARVLCDSFQSCATAGHMVRYRGNVMMMKSYCRLIGGCTRSIMHVNSPRYRRALQIPSDTPHLTFTAFAARYVTSAEEHVLRTAVRLGL 307
            VC   ++ +    + L++  H  A V CD+ +SC T GHMV +RG VMMM  YC + G C +  MHVNSPR  R L+  S T  L +T FAA++ T  EE VL  A+RLGL
Sbjct:   52 VCEDVRAWSAFQSHQLLFEKHGMAWVFCDANESCTTDGHMVVFRGQVMMMNKYCDIFG-CEKRSMHVNSPRNTRGLRAQSRTGGLAYTVFAAKHETRMEEGVLLVAIRLGL 161          
The following BLAST results are available for this feature:
BLAST of Gchil5510.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A2V3IDX8_9FLOR3.470e-6041.16Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IQ05_9FLOR8.600e-3761.95Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IN45_9FLOR7.920e-3633.76Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IFS2_9FLOR4.180e-3562.16U1 small nuclear ribonucleoprotein 70 kDa n=1 Tax=... [more]
R7Q4J5_CHOCR2.260e-3254.05Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3J1H7_9FLOR2.600e-2955.36Early nodulin-12A n=1 Tax=Gracilariopsis chorda Ta... [more]
R7Q6G8_CHOCR2.630e-2853.15Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q9R8_CHOCR4.700e-2752.54Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3ISB7_9FLOR6.960e-2549.56Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IE72_9FLOR3.940e-2245.95Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..192
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..307
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:2264831..2265754 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5510.t1Gchil5510.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 2264831..2265754 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5510.t1 ID=Gchil5510.t1|Name=Gchil5510.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=308bp
MSFFSATLSIALFALLCSPSQAAEGFIGPCRINADCANGRVCREVDFENI
SILSGLSLDSIKNAVKDDCGREPKYCVCLPESGDSDLTICSGNDKCLDVE
VCRRDEEQGICISKTQNEAILAIQEKAEADESSSAVCGTLLSQCPSERQC
VGSPVGFCLAKLPPPSDANAGANADGGQSTSENDAESGDQGDDSSEVCIA
AKSLAHLDRNHLIYRNHVSARVLCDSFQSCATAGHMVRYRGNVMMMKSYC
RLIGGCTRSIMHVNSPRYRRALQIPSDTPHLTFTAFAARYVTSAEEHVLR
TAVRLGL*
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