Gchil5477.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5477.t1
Unique NameGchil5477.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length344
Homology
BLAST of Gchil5477.t1 vs. uniprot
Match: A0A2V3JC81_9FLOR (Bromodomain-containing factor 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3JC81_9FLOR)

HSP 1 Score: 458 bits (1178), Expect = 2.330e-159
Identity = 248/343 (72.30%), Postives = 290/343 (84.55%), Query Frame = 0
Query:    1 MGETARKKQRKREPIKKTELLSPIPSDPSVAHEQFQFCKTLVAEVLDDEQALSFSKPVSELWDPAVLTDYFENIKHPMDLGTVQTSLLSNTFNNSDSHFDPNLFRHQIRLVFLNAIDYNQRNTDLHRLASKFIHFIDSRLAAIPVPSSSSPHSDQNGSASPPSDRPSTGSTADKKKRAADEEKEHSRDEHMSAQENEQDAVVEKLKTQIAAFEKRKAKSEAMLAELEIKRNIPLSFEENSKLRDDVEKLPWETAQKVVHILRKYVDDALEQMSEEDPEFVTLEFSTVEPRLLRDIESLVRPDPVKDRERKAIEQCEEDIANAKRKLRMLADGDSGKKKARRRR 343
            MGET RKKQRKREP+KKTE L P+P+DPSV +EQF FC  LV EVLDDE ALSFSKPV ELW+PAVLTDYFE IK PMDLGTVQ +L +N +++    F+PNLFR +IRLVFLNA++YNQR TDL+RLA+KFIH ID++LA+IPVPS + P  DQNG++SP SD P++ S  D+KK      KE      MS  E+E D+ VE LK+QIAAFEK+KAKSEA+LAE+E+KRNIPL+F+E+SKLRD+VEKLPWETAQKVV ILRKYVDDALEQMSEEDPEFVTLEFSTVEP LLRDIESLVRPDP K+RER+AIEQ EE+IANAKRKLRM++DG+SGKKK RRRR
Sbjct:    1 MGETGRKKQRKREPVKKTEQLPPLPTDPSVVNEQFHFCNELVGEVLDDEHALSFSKPVDELWEPAVLTDYFEKIKRPMDLGTVQKTLNNNGYDDDAGRFNPNLFRKEIRLVFLNAMEYNQRGTDLNRLANKFIHHIDTKLASIPVPSPNKPSDDQNGNSSPLSDTPASASRNDRKKG-----KEXXXXXXMS-NEHEDDSAVETLKSQIAAFEKKKAKSEAVLAEMELKRNIPLTFDESSKLRDEVEKLPWETAQKVVGILRKYVDDALEQMSEEDPEFVTLEFSTVEPTLLRDIESLVRPDPAKERERRAIEQYEEEIANAKRKLRMISDGESGKKKVRRRR 337          
BLAST of Gchil5477.t1 vs. uniprot
Match: Q4T881_TETNG ((spotted green pufferfish) hypothetical protein n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=Q4T881_TETNG)

HSP 1 Score: 73.2 bits (178), Expect = 2.050e-10
Identity = 78/283 (27.56%), Postives = 120/283 (42.40%), Query Frame = 0
Query:   28 PSVAHEQFQFCKTLVAEVLDDEQAL---SFSKPVSELWDPAVLTDYFENIKHPMDLGTVQTSLLSNTFNNSDSHFDPNLFRHQIRLVFLNAIDYNQRNTDLHRLASKFIHFIDSRLA--------AIPVPSSSSPHSDQNGSASPPSDRPSTGSTADKKKRAADEEKEHSRDEHMSAQENEQDAVVEKLKTQIAAFEKRKAKSEAMLAELEIKRNIPLSFEENSKLRDDVEKLPWETAQKVVHILRKYVDDALEQMSEEDPEFVTLEFSTVEPRLLRDIESLV 299
            P    EQ +FC  LV E+L  + A     F KPV        L DY++ IKHPMDL T++  +      +S  + D   F   +RL+F N   YN  + D+  +A       + R A        A+PVP+ SS       +   P    S  S+               R + + AQ  EQ AVV                S      +  +R  P+S+EE  +L  D+ KLP +   +VVHI++         +   +P+ + ++F T++P  LR++E  V
Sbjct:  738 PPKRQEQLRFCARLVREMLSRKHASYAWPFYKPVDVT--SLGLHDYYDIIKHPMDLSTIKKKM------DSRQYRDAQEFAADVRLMFSNCYKYNPPDHDVVSMARNLQDVFEMRFAKMPDDPEEAVPVPTPSSALLPAPSTRQVPXXAVSDDSSXXXXXXXXXXXXXXXRQQRL-AQLQEQTAVVS---------------SPDAFGSVSTERCRPMSYEEKRQLSLDINKLPGDKLGRVVHIIQTREPS----LKSSNPDEIEIDFETLKPSTLRELEKYV 992          
BLAST of Gchil5477.t1 vs. uniprot
Match: A0A5J4Z088_PORPP (Transcription factor GTE1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z088_PORPP)

HSP 1 Score: 70.9 bits (172), Expect = 6.270e-10
Identity = 40/96 (41.67%), Postives = 54/96 (56.25%), Query Frame = 0
Query:   35 FQFCKTLVAEVLDDEQALS-FSKPVSELWDPAVLTDYFENIKHPMDLGTVQTSLLSNTFNNSDSHFDPNLFRHQIRLVFLNAIDYNQRNTDLHRLA 129
            F  C  L+  +L D +  S F KPV+ELW P  +  Y E I+HPMDL TV+ +LL   +  SD   D   F   +RLVF NA+ YN+     ++LA
Sbjct:   95 FNLCLDLLHNLLADPEVASVFGKPVTELWLPESIPGYLEAIEHPMDLDTVKRNLLRGAYT-SDERTDVQAFSEDVRLVFENAMLYNEEYNVYYQLA 189          
BLAST of Gchil5477.t1 vs. uniprot
Match: A0A2J6L8Y8_LACSA (Uncharacterized protein n=4 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6L8Y8_LACSA)

HSP 1 Score: 70.9 bits (172), Expect = 7.360e-10
Identity = 39/113 (34.51%), Postives = 62/113 (54.87%), Query Frame = 0
Query:   27 DPSVAHEQFQFCKTLVAEVLDDEQALSFSKPVSELWDPAVLTDYFENIKHPMDLGTVQTSLLSNTFNNSDSHFDPNLFRHQIRLVFLNAIDYNQRNTDLHRLASKFIHFIDSR 139
            D   +++ F+ C TL+ +++  +    F+KPV  L     L DYF+ IKHPMDL TV++ L  N +N+      P  F   +RL F NA+ YN +  D+H +A   ++F   +
Sbjct:  172 DAKFSNKLFKSCSTLLEKLMKHKHGWVFNKPVDPL--ALGLHDYFDIIKHPMDLETVKSRLDKNWYNS------PMEFAEDVRLTFHNAMTYNPKGQDVHAMAELLLNFFQEK 276          
BLAST of Gchil5477.t1 vs. uniprot
Match: A0A6S7MRZ3_LACSI (Uncharacterized protein n=1 Tax=Lactuca saligna TaxID=75948 RepID=A0A6S7MRZ3_LACSI)

HSP 1 Score: 70.9 bits (172), Expect = 7.770e-10
Identity = 39/113 (34.51%), Postives = 62/113 (54.87%), Query Frame = 0
Query:   27 DPSVAHEQFQFCKTLVAEVLDDEQALSFSKPVSELWDPAVLTDYFENIKHPMDLGTVQTSLLSNTFNNSDSHFDPNLFRHQIRLVFLNAIDYNQRNTDLHRLASKFIHFIDSR 139
            D   +++ F+ C TL+ +++  +    F+KPV  L     L DYF+ IKHPMDL TV++ L  N +N+      P  F   +RL F NA+ YN +  D+H +A   ++F   +
Sbjct:  206 DAKFSNKLFKSCSTLLEKLMKHKHGWVFNKPVDPL--ALGLHDYFDIIKHPMDLETVKSRLDKNWYNS------PMEFAEDVRLTFHNAMTYNPKGQDVHAMAELLLNFFQEK 310          
BLAST of Gchil5477.t1 vs. uniprot
Match: S8CL60_9LAMI (Uncharacterized protein n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CL60_9LAMI)

HSP 1 Score: 70.5 bits (171), Expect = 1.240e-9
Identity = 37/112 (33.04%), Postives = 61/112 (54.46%), Query Frame = 0
Query:   32 HEQFQFCKTLVAEVLDDEQALSFSKPVSELWDPAVLTDYFENIKHPMDLGTVQTSLLSNTFNNSDSHFDPNLFRHQIRLVFLNAIDYNQRNTDLHRLASKFIHFIDSRLAAI 143
            ++ F+ C TL+  ++  + +  F+ PV  +     L DY++ IKHPMDLGT++T L    +N+      P  F   +RLVF NA+ YN +  D+H +A + +   + R   I
Sbjct:  412 NQVFRNCSTLLQRLMKHKFSWVFNTPVDVMG--MGLLDYYDIIKHPMDLGTIKTKLSEGVYNS------PREFADDVRLVFNNALTYNPKGQDVHTMAEELLQIFEERWGVI 515          
BLAST of Gchil5477.t1 vs. uniprot
Match: A0A2I0I130_PUNGR (transcription factor GTE4-like n=2 Tax=Punica granatum TaxID=22663 RepID=A0A2I0I130_PUNGR)

HSP 1 Score: 70.1 bits (170), Expect = 1.450e-9
Identity = 67/266 (25.19%), Postives = 113/266 (42.48%), Query Frame = 0
Query:   35 FQFCKTLVAEVLDDEQALSFSKPVSELWDPAVLTDYFENIKHPMDLGTVQTSLLSNTFNNSDSHFDPNLFRHQIRLVFLNAIDYNQRNTDLHRLASKFIHFIDSRLAAIP-------------VPSSSSPHSDQNGSASPPSDRPSTGSTADKKKRAADEEKEHSRDEHMSAQENEQDAVVEKLKTQIAAFEKRKAKSEAMLAELEIKRNIPLSFEENSKLRDDVEKLPWETAQKVVHILRKYVDDALEQMSEEDPEFVTLEFSTV 287
            F+ C  L+  ++  +    F+KPV    +   L DYF  IKHPMDLGTVQT L  N + +      P  F   +RL   NA+ YN +  D+H +A   +   + + A I              V S  +P S +  + S P   PS                  SR +      +E   +  + +T+ A+             +++  +   +++EE  KL DD++ LP E  + VV I++K      +Q  E + +  +++  T+
Sbjct:  211 FKSCSNLLTRLMKHKFGWVFNKPVDA--EGLGLHDYFTIIKHPMDLGTVQTRLNKNWYKS------PREFAEDVRLTLCNAMLYNPKGQDVHFMADTLLKMFEEKWAVIEKEHNLEFRRYDMAVQSLQTPTSKKAPTPSAPPALPS------------------SRPQLRDLDRSESTTLPVESRTKPASLHNTGRTPVTKKPKVKDTQKREMTYEEKQKLSDDLQNLPSEKLENVVQIIKKRNPHLFQQEDEIEVDIDSVDLETL 450          
BLAST of Gchil5477.t1 vs. uniprot
Match: C4Y5I0_CLAL4 (Uncharacterized protein n=2 Tax=Clavispora lusitaniae TaxID=36911 RepID=C4Y5I0_CLAL4)

HSP 1 Score: 70.1 bits (170), Expect = 1.550e-9
Identity = 39/127 (30.71%), Postives = 66/127 (51.97%), Query Frame = 0
Query:   34 QFQFCKTLVAEVLDDEQALSFSKPVSELWDPAVLT--DYFENIKHPMDLGTVQTSLLSNTFNNSDSHFDPNLFRHQIRLVFLNAIDYNQRNTDLHRLASKFIHFIDSRLAAIPVPSSSSPHSDQNGS 158
            + +FC  ++ E++  ++  S + P  +  DP  L   +YF+ +K PMDLG++QT L +N + N D       F   +RLVF N   +N    D+H +  +     D + A  PVP+++  HS+   S
Sbjct:  283 ELRFCNQVIKELMS-KKFYSINFPFLQPVDPVALNIPNYFDIVKEPMDLGSIQTKLANNQYENGDE------FEKDVRLVFKNCYLFNPEGNDVHSMGQRLEQVFDKKWANKPVPAATPTHSENEDS 402          
BLAST of Gchil5477.t1 vs. uniprot
Match: UPI001CB9B049 (transcription factor GTE4-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9B049)

HSP 1 Score: 69.7 bits (169), Expect = 2.150e-9
Identity = 38/117 (32.48%), Postives = 63/117 (53.85%), Query Frame = 0
Query:   27 DPSVAHEQFQFCKTLVAEVLDDEQALSFSKPVSELWDPAVLTDYFENIKHPMDLGTVQTSLLSNTFNNSDSHFDPNLFRHQIRLVFLNAIDYNQRNTDLHRLASKFIHFIDSRLAAI 143
            + S  ++ ++ C +L+  ++  +    F++PV        L DYF+ IKHPMDLGTV++ L  N + +      PN F   +RL F NA+ YN +  D+H +A   ++  + R A I
Sbjct:  316 EESHRNQMYRSCNSLLQRLMKHKHGWVFNEPVKAKL--LGLHDYFDIIKHPMDLGTVKSRLAQNFYKS------PNEFADDVRLTFHNAMTYNPKGQDVHVMAENLLNIFEERWAVI 424          
BLAST of Gchil5477.t1 vs. uniprot
Match: UPI000B8F9505 (transcription factor GTE4 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B8F9505)

HSP 1 Score: 69.3 bits (168), Expect = 2.340e-9
Identity = 38/113 (33.63%), Postives = 61/113 (53.98%), Query Frame = 0
Query:   27 DPSVAHEQFQFCKTLVAEVLDDEQALSFSKPVSELWDPAVLTDYFENIKHPMDLGTVQTSLLSNTFNNSDSHFDPNLFRHQIRLVFLNAIDYNQRNTDLHRLASKFIHFIDSR 139
            D   +++ F+ C TL+ +++  +    F+ PV  L     L DYF+ IKHPMDLGTV++ L  N +N+      P  F   +RL F NA+ YN +  D+H +A   +   + +
Sbjct:  127 DAKFSNKVFKSCGTLLEKLMKHKHGWVFNTPVDPL--ALGLHDYFDIIKHPMDLGTVKSRLEKNWYNS------PMEFAEDVRLTFQNALTYNLKGQDVHAMAELLLKLFEEK 231          
The following BLAST results are available for this feature:
BLAST of Gchil5477.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3JC81_9FLOR2.330e-15972.30Bromodomain-containing factor 1 n=1 Tax=Gracilario... [more]
Q4T881_TETNG2.050e-1027.56(spotted green pufferfish) hypothetical protein n=... [more]
A0A5J4Z088_PORPP6.270e-1041.67Transcription factor GTE1 n=1 Tax=Porphyridium pur... [more]
A0A2J6L8Y8_LACSA7.360e-1034.51Uncharacterized protein n=4 Tax=Lactuca sativa Tax... [more]
A0A6S7MRZ3_LACSI7.770e-1034.51Uncharacterized protein n=1 Tax=Lactuca saligna Ta... [more]
S8CL60_9LAMI1.240e-933.04Uncharacterized protein n=1 Tax=Genlisea aurea Tax... [more]
A0A2I0I130_PUNGR1.450e-925.19transcription factor GTE4-like n=2 Tax=Punica gran... [more]
C4Y5I0_CLAL41.550e-930.71Uncharacterized protein n=2 Tax=Clavispora lusitan... [more]
UPI001CB9B0492.150e-932.48transcription factor GTE4-like n=1 Tax=Erigeron ca... [more]
UPI000B8F95052.340e-933.63transcription factor GTE4 n=1 Tax=Helianthus annuu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 202..229
NoneNo IPR availableCOILSCoilCoilcoord: 305..332
NoneNo IPR availableCOILSCoilCoilcoord: 176..196
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..200
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..200
NoneNo IPR availablePANTHERPTHR22880FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINScoord: 7..318
NoneNo IPR availablePANTHERPTHR22880:SF225BROMODOMAIN-CONTAINING PROTEIN 2coord: 7..318
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 107..126
score: 29.78
coord: 67..83
score: 49.62
IPR001487BromodomainSMARTSM00297bromo_6coord: 31..145
e-value: 3.3E-5
score: 33.3
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 38..130
e-value: 6.2E-15
score: 55.1
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 46..126
score: 12.3746
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 2..150
e-value: 2.6E-19
score: 71.3
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 25..143
IPR027353NET domainPFAMPF17035BETcoord: 233..300
e-value: 2.4E-6
score: 27.6
IPR038336NET domain superfamilyGENE3D1.20.1270.220coord: 227..311
e-value: 8.5E-9
score: 37.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:2030958..2031989 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5477.t1Gchil5477.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 2030958..2031989 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5477.t1 ID=Gchil5477.t1|Name=Gchil5477.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=344bp
MGETARKKQRKREPIKKTELLSPIPSDPSVAHEQFQFCKTLVAEVLDDEQ
ALSFSKPVSELWDPAVLTDYFENIKHPMDLGTVQTSLLSNTFNNSDSHFD
PNLFRHQIRLVFLNAIDYNQRNTDLHRLASKFIHFIDSRLAAIPVPSSSS
PHSDQNGSASPPSDRPSTGSTADKKKRAADEEKEHSRDEHMSAQENEQDA
VVEKLKTQIAAFEKRKAKSEAMLAELEIKRNIPLSFEENSKLRDDVEKLP
WETAQKVVHILRKYVDDALEQMSEEDPEFVTLEFSTVEPRLLRDIESLVR
PDPVKDRERKAIEQCEEDIANAKRKLRMLADGDSGKKKARRRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf
IPR027353NET_dom
IPR038336NET_sf