Gchil5474.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5474.t1
Unique NameGchil5474.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length327
Homology
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BLAST of Gchil5474.t1 vs. uniprot
Match: A0A2V3J7V8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J7V8_9FLOR)

HSP 1 Score: 274 bits (700), Expect = 2.660e-87
Identity = 149/325 (45.85%), Postives = 208/325 (64.00%), Query Frame = 0 
Query:    1 MLPSDDVFAPEPQVRLKALQQYSNALEEAPEMLLSEGASFEALLRLVAERDPDESVRHGVLSIPQCPKSVLQHILNVGSEKTRHAVIRAIGNRRSHPPVTLLVQHIPLESNLKLKLFALKVFHDLLLLGKVPDLLLQKALGMHSPPTDALEQFDCEGVLRDCVESEQRVMRSATSHILVSLITQQHTAVAKAAFAMLETLVRDGDGRVAEVALSGMANLIPLRHELQLSEKCVRAMIVRYASATHRTNVLKAFAGIPCCSLKAYAMLQVFLKRRLYQSEMESRGEGEWVQELRRVLLSVVRRNEDFVRVLDLRETETHKMMRLIE 325
            M+PSDDVF+ +P VR +AL  YS  L + P    S+  SF  LL+LV   DPD +VR   LS+ QCP  VL   LN    + R A IRAI  +        L+QHIPLE N ++  FALK    LL    VP+  + +ALG+   P   L+ FDCEGVLR+C E E+  +R+AT+ +L +++ +Q    A  AF  LE L+RD DGRVA  AL  ++ ++P +HEL+LSEKCVRA++VR++S + R ++ K  AG PC SLKAYA+LQ F++RRLY+           ++E+++ L+ +VR N+DF RVLDLRE+++ KM+RLIE
Sbjct:    1 MVPSDDVFSQDPCVRKQALHDYSELLAKDPNSAASDILSFAELLKLVVRDDPDPNVRCTALSLSQCPVDVLHEALNSSDVEAREAAIRAISEQPHGQHSKPLLQHIPLEPNPRILHFALKALDVLLSHNAVPNNSISRALGIPPTPNGPLDAFDCEGVLRECAEHEEHEVRTATAEVLATIVAKQEPVAANEAFFTLEQLLRDADGRVAIAALCALSRILPTQHELRLSEKCVRAILVRFSSPSTRADIFKVLAGFPCKSLKAYAVLQTFVRRRLYKIASGIVTTNRELEEVQQGLVEIVRCNQDFARVLDLRESQSQKMIRLIE 325
The following BLAST results are available for this feature:
BLAST of Gchil5474.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J7V8_9FLOR2.660e-8745.85Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 9..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:2024011..2024991 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5474.t1Gchil5474.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 2024011..2024991 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5474.t1 ID=Gchil5474.t1|Name=Gchil5474.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=327bp
MLPSDDVFAPEPQVRLKALQQYSNALEEAPEMLLSEGASFEALLRLVAER
DPDESVRHGVLSIPQCPKSVLQHILNVGSEKTRHAVIRAIGNRRSHPPVT
LLVQHIPLESNLKLKLFALKVFHDLLLLGKVPDLLLQKALGMHSPPTDAL
EQFDCEGVLRDCVESEQRVMRSATSHILVSLITQQHTAVAKAAFAMLETL
VRDGDGRVAEVALSGMANLIPLRHELQLSEKCVRAMIVRYASATHRTNVL
KAFAGIPCCSLKAYAMLQVFLKRRLYQSEMESRGEGEWVQELRRVLLSVV
RRNEDFVRVLDLRETETHKMMRLIEP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold