Gchil5469.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5469.t1
Unique NameGchil5469.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length256
Homology
BLAST of Gchil5469.t1 vs. uniprot
Match: A0A2V3J6D0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6D0_9FLOR)

HSP 1 Score: 313 bits (801), Expect = 1.280e-104
Identity = 169/255 (66.27%), Postives = 193/255 (75.69%), Query Frame = 0
Query:    8 AFQSSLPLSCH--------SPLKLLSSCRPPRAARPRVTTVTAVLSERFPLPDPFSFPSVAFTQPSIYPDLRPELVGACLWGVGLYLGFSQRVRWGTAVQNALNATLLNFLPLQVADVLASVFHTLPFLIAAFTTDALLRYASAGSATWAVASGLSVAMYGGVYELARSSVRSKKLTDDDKKLFQVFTAFAERTLAPNPNGRCHLIDIRSAIRNDPNARALSAISDETLRRFVRTKFPNAKRSPNGFYRGLSIRQ 254
            AF + LPL  H        +P   +    P R A PR     A LS  FPLPDPF+FP+VAFTQPSI  D+RPEL+G CLWG+GLYLGFSQRVRWGTAVQNAL   L  F+PL VAD L+SVFHTLPFL+AAF++DA LRY +AGSATWAVASGLS+AMYGGVYEL R + R++KLTD D++ +  FT FA+R L  N  GRCHLIDIR AIR DPNA  LS+ISDETLR+FVR  FP AKRSPNGFYRGLSIRQ
Sbjct:    8 AFCAHLPLLRHQSAFRPICAPATQVRLSSPLRRASPR-----ASLSSPFPLPDPFAFPAVAFTQPSISSDIRPELIGTCLWGIGLYLGFSQRVRWGTAVQNALTNALNAFVPLNVADALSSVFHTLPFLVAAFSSDAALRYFNAGSATWAVASGLSLAMYGGVYELGRLNARTRKLTDADERAYSTFTQFAQRKLIAN--GRCHLIDIREAIREDPNATRLSSISDETLRKFVRNAFPRAKRSPNGFYRGLSIRQ 255          
BLAST of Gchil5469.t1 vs. uniprot
Match: R7QTR7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTR7_CHOCR)

HSP 1 Score: 230 bits (586), Expect = 1.440e-71
Identity = 132/252 (52.38%), Postives = 163/252 (64.68%), Query Frame = 0
Query:    6 ALAFQSSLPLSCHSPLKLLSSCRPPRA-ARPRVTTVTAVLSERFPLPDPFSFPSVAFTQPSIYPDLRPELVGACLWGVGLYLGFSQRVRWGTAVQNALNATLLNF-LPLQVADVLASVFHTLPFLIAAFTTDALLRYASAGSATWAVASGLSVAMYGGVYELARSSVRSKKLTDDDKKLFQVFTAFAERTLAPNPNGRCHLIDIRSAIRNDPNARALSAISDETLRRFVRTKFPNAKRSPNGFYRGLSIRQL 255
            A A    LP    S    LS C P       R    +A LS  FPLPD FSFP+V F   +   D RPELVG+ LW  GLYLGFSQ  RWG+ V +A    L +F LP    +VL    H+LPFL   F  DA+LR+A+ GSA WA+A+GLSVA YGG+YELARSSV  KKL+++D++ + +F  FA R L     G CHLIDI+ A+R DP AR+L+ +SDE+LRRFVR +FP AKRSPNG+YRGLS+  L
Sbjct:   39 AFATTGQLPTFSKSLNPSLSRCSPTSTHITARRARFSASLSSPFPLPDLFSFPNVVFLSSTASSDFRPELVGSLLWTAGLYLGFSQSKRWGSMVFDAQAKLLRSFQLPELAVEVLVLPTHSLPFLATGFGIDAVLRHANGGSAVWAIAAGLSVASYGGIYELARSSVTPKKLSEEDQRRYDLFDDFARRKL--RACGMCHLIDIKEAVRGDPKARSLTYLSDESLRRFVRNRFPKAKRSPNGYYRGLSLLDL 288          
BLAST of Gchil5469.t1 vs. uniprot
Match: A0A5J4YXV1_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YXV1_PORPP)

HSP 1 Score: 119 bits (299), Expect = 1.790e-28
Identity = 87/230 (37.83%), Postives = 116/230 (50.43%), Query Frame = 0
Query:   54 FSFPSVAFTQPSIYPDLRPELVGACLWGVGLYLGFSQRVRWGTAVQNALNATL-LNFLPLQ--------------------------VADVLASVFHTLPFLIAAFTTDALLRYASAGSATWAVASGLSVAMYGGVYELAR---SSVRSKKLTDDDKKLFQVFTAFAERTLAPNPNGRCHLIDIRSAIRND-PNARALSAISDETLRRFVRTKFPNAKRSPNGFYRGLSI 252
            FS  S A     + P+L P    A LW    Y GFS+RVRWGT +   L   L  + LP                             A+++A+  H+LPFL+AA   D LLR  S G  TW ++S  +  ++ GVYEL R    S  S++  + ++K +  F  FA+R L    +GRCH  D+ SA R   P  R  S +SDE +RRF+R   P+A RSPNGFYR LSI
Sbjct:   81 FSPESAALAHSGV-PNLAPS---ALLWAFACYFGFSERVRWGTELNRRLRVALERSVLPPGEKVAVASSSDGQSSADAQSPPEPEHGAAELVAAALHSLPFLLAAIGIDTLLRK-SVGE-TWTLSSATTAVLWSGVYELGRWSAGSFMSEEEKEAERKAYDAFCEFADRAL--KRSGRCHFSDVASAFRLQCPAYRTRSKLSDEQIRRFIRRAAPDAVRSPNGFYRNLSI 302          
BLAST of Gchil5469.t1 vs. uniprot
Match: A0A7S0G172_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G172_9RHOD)

HSP 1 Score: 103 bits (257), Expect = 1.190e-23
Identity = 61/183 (33.33%), Postives = 110/183 (60.11%), Query Frame = 0
Query:   73 ELVGACLWGVGLYLGFSQRVRWGTAVQNALNATLLNF-LPLQVADVLASVFHTLPFLIAAFTTDALLRYASAGSATWAVASGLSVAMYGGVYELARSSVRSKKLTDDDKKLFQVFTAFAERTLAPNPNGRCHLIDIRSAIRND-PNARALSAISDETLRRFVRTKFPNAKRSPNGFYRGLSIR 253
            +++G C W V LY GFS ++R GTA++  +  +L    +   +AD +A+ FHT PF+  A   D++LR  S G   +A + G+ ++++  ++EL R   RS++  ++++  FQ F  FAE++L  +  GRCH +++ +  R   P  R    ++D+ L+RFV +  P A+R+  G+Y+ LS++
Sbjct:    1 DILGLCTWFVVLYFGFSDKIRLGTALRKIMAESLERANVGKDLADGIATAFHTFPFIFGALFIDSVLR-GSLGPG-FASSGGIFLSLWAMIFELERPRERSEEELEEERLAFQAFCEFAEKSL--DRRGRCHYVEVATEFRRQYPKYRDPRVLNDQVLKRFVASWAPAARRTRAGYYKDLSVK 179          
BLAST of Gchil5469.t1 vs. uniprot
Match: A0A8J4D162_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4D162_9CHLO)

HSP 1 Score: 69.3 bits (168), Expect = 5.800e-10
Identity = 40/113 (35.40%), Postives = 63/113 (55.75%), Query Frame = 0
Query:  141 ASAGSATWAVASGLSVAMYGGVYELARSSVRSKKLTDDDKKLFQVFTAFAERTLAPNPNGRCHLIDIRSAIRND-PNARALSAISDETLRRFVRTKFPNAKRSPNGFYRGLSI 252
            A  G + WA+++G    +  GVYE+ R    + + T    + ++ F  FAE  L  +  GRCH  ++ +A R + P  R+  A+SD  LR  +R   P+A R+PNG+YR LS+
Sbjct:  205 AGLGDSIWALSTGTGACLAAGVYEVGRPKRLNLEETRQLDQQWRDFVGFAESRLVRS--GRCHESEVAAAFRREFPRYRSREALSDGVLRDLIRNWHPDADRTPNGYYRNLSL 315          
BLAST of Gchil5469.t1 vs. uniprot
Match: A0A150GQ49_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GQ49_GONPE)

HSP 1 Score: 66.6 bits (161), Expect = 3.050e-9
Identity = 37/110 (33.64%), Postives = 62/110 (56.36%), Query Frame = 0
Query:  144 GSATWAVASGLSVAMYGGVYELARSSVRSKKLTDDDKKLFQVFTAFAERTLAPNPNGRCHLIDIRSAIRND-PNARALSAISDETLRRFVRTKFPNAKRSPNGFYRGLSI 252
            G++ WA+++G    +  GVYE+ R +   ++        ++ F AFA+  L    +GRCH  ++ +  R + P  R+  A+SD  LR  +R   P+A R+PNG+YR LS+
Sbjct:  124 GNSIWALSTGTGACLAAGVYEVGRPTRLDRQEAAQLDAQWRDFVAFADARL--QRSGRCHESEVVAVFRREVPRYRSPEALSDAVLRDLIRNWHPDASRTPNGYYRNLSL 231          
BLAST of Gchil5469.t1 vs. uniprot
Match: A0A8J4F7U0_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F7U0_9CHLO)

HSP 1 Score: 66.6 bits (161), Expect = 4.910e-9
Identity = 38/113 (33.63%), Postives = 62/113 (54.87%), Query Frame = 0
Query:  141 ASAGSATWAVASGLSVAMYGGVYELARSSVRSKKLTDDDKKLFQVFTAFAERTLAPNPNGRCHLIDIRSAIRND-PNARALSAISDETLRRFVRTKFPNAKRSPNGFYRGLSI 252
            A  G + WA+++G    +  GVYE+ R    + +      + ++ F  FAE  L  +  GRCH  ++ +A+R + P  R+  A+SD  LR  +R   P+  R+PNG+YR LS+
Sbjct:  205 AGLGDSIWALSTGTGACLAAGVYEVGRPKRLNLEEARQLDQQWRDFVGFAESRLVRS--GRCHESEVAAALRRELPRYRSQEALSDGVLRDLIRNWHPDVDRTPNGYYRNLSL 315          
BLAST of Gchil5469.t1 vs. uniprot
Match: D8UCV5_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UCV5_VOLCA)

HSP 1 Score: 67.0 bits (162), Expect = 5.810e-9
Identity = 40/113 (35.40%), Postives = 61/113 (53.98%), Query Frame = 0
Query:  141 ASAGSATWAVASGLSVAMYGGVYELARSSVRSKKLTDDDKKLFQVFTAFAERTLAPNPNGRCHLIDIRSAIRND-PNARALSAISDETLRRFVRTKFPNAKRSPNGFYRGLSI 252
            A  G + WA+++G    +  GVYE+ R    S +      + ++ F  FAE  L  +  GRCH  D+ +A R + P  R+  A+ D  LR  +RT   +A R+PNG+YR LS+
Sbjct: 1230 AGLGDSIWALSTGTGACLAAGVYEVGRPRRLSLEEARQLDQQWRDFVTFAESRLVRS--GRCHESDVAAAFRRELPRYRSREALPDAVLRDLIRTWHSDADRTPNGYYRNLSL 1340          
BLAST of Gchil5469.t1 vs. uniprot
Match: E1ZE98_CHLVA (Expressed protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZE98_CHLVA)

HSP 1 Score: 65.9 bits (159), Expect = 8.230e-9
Identity = 41/112 (36.61%), Postives = 62/112 (55.36%), Query Frame = 0
Query:  144 GSATWAVASGLSVAMYGGVYELARSSVRSKKLTDDDKKLFQVFTAFAERTLAPNPNGRCHLIDIRSAIRND-PNARA-LSAISDETLRRFVRTKFPNAKRSPNGFYRGLSIR 253
            G ATWAV++GL   M  G+YE+ R    S +     ++ +Q F  FA+  L     GRCH  ++  A++ + P  R   S +    LR  VR   P+A+RS NGF++GLS++
Sbjct:  222 GDATWAVSTGLGSCMAAGMYEVGRPRRLSVEEAQAKEQQWQEFGRFADERL--ERRGRCHETEVMRALQREMPKYRGEASGLDSSALRDLVRNWAPDAERSSNGFWKGLSLK 331          
The following BLAST results are available for this feature:
BLAST of Gchil5469.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A2V3J6D0_9FLOR1.280e-10466.27Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QTR7_CHOCR1.440e-7152.38Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4YXV1_PORPP1.790e-2837.83Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S0G172_9RHOD1.190e-2333.33Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A8J4D162_9CHLO5.800e-1035.40Uncharacterized protein n=1 Tax=Volvox reticulifer... [more]
A0A150GQ49_GONPE3.050e-933.64Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]
A0A8J4F7U0_9CHLO4.910e-933.63Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
D8UCV5_VOLCA5.810e-935.40Uncharacterized protein n=1 Tax=Volvox carteri f. ... [more]
E1ZE98_CHLVA8.230e-936.61Expressed protein n=1 Tax=Chlorella variabilis Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..255
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:1949746..1950513 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5469.t1Gchil5469.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 1949746..1950513 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5469.t1 ID=Gchil5469.t1|Name=Gchil5469.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=256bp
MSSHSALAFQSSLPLSCHSPLKLLSSCRPPRAARPRVTTVTAVLSERFPL
PDPFSFPSVAFTQPSIYPDLRPELVGACLWGVGLYLGFSQRVRWGTAVQN
ALNATLLNFLPLQVADVLASVFHTLPFLIAAFTTDALLRYASAGSATWAV
ASGLSVAMYGGVYELARSSVRSKKLTDDDKKLFQVFTAFAERTLAPNPNG
RCHLIDIRSAIRNDPNARALSAISDETLRRFVRTKFPNAKRSPNGFYRGL
SIRQL*
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