Gchil5446.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5446.t1
Unique NameGchil5446.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length214
Homology
BLAST of Gchil5446.t1 vs. uniprot
Match: A0A2V3J6E0_9FLOR (Cell division control protein 42-like n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=A0A2V3J6E0_9FLOR)

HSP 1 Score: 345 bits (884), Expect = 3.010e-119
Identity = 164/179 (91.62%), Postives = 173/179 (96.65%), Query Frame = 0
Query:   35 MVYSYAENKFPTDYVPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRQDPVEIERLRQRGEAPLSSEEGEKVSRSIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPRRSAAAPTACCTIA 213
            MVYSYAENKFPTDYVPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVH PSLEN+ERRWAPEIKRV PGSHMILCGCKMDLR DPVE+ERLRQRG+AP+++ EGE V+R+IGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPRRSA+AP ACCTIA
Sbjct:    1 MVYSYAENKFPTDYVPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHHPSLENVERRWAPEIKRVCPGSHMILCGCKMDLRHDPVEVERLRQRGQAPVTTAEGETVARNIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPRRSASAPGACCTIA 179          
BLAST of Gchil5446.t1 vs. uniprot
Match: M2X0X3_GALSU (Cell division control protein 42 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X0X3_GALSU)

HSP 1 Score: 223 bits (568), Expect = 7.330e-71
Identity = 109/193 (56.48%), Postives = 143/193 (74.09%), Query Frame = 0
Query:   20 VKTVLVGDGSVGKTCMVYSYAENKFPTDYVPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRQDPVEIERLRQRGEAPLSSEEGEKVSRSIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPRRSAAAPTACCTI 212
            +K V+VGDG+VGKTCM+ SY  N+FPTDYVPTVFD +TATV VD  P  +EL DTAGQEDY+RLRALSY +TDVFILC+S+V+ PS EN+E +W PE++R SPG  +IL G K+DL  DP E+ +L +RG++P++ E G+++S  IG   + ECSA TQ GLK+VFDEA+ +A  P        +   ACC+I
Sbjct:    7 IKIVVVGDGAVGKTCMLMSYTTNRFPTDYVPTVFDNYTATVMVDDEPVQIELWDTAGQEDYQRLRALSYFQTDVFILCFSLVNPPSFENVESKWIPELQRNSPGVPIILAGTKLDLVNDPQELSKLSKRGQSPIAVEMGKQLSSKIGG-VYRECSAFTQAGLKEVFDEAIRAALAPKLSNSVYTSTNQACCSI 198          
BLAST of Gchil5446.t1 vs. uniprot
Match: A0A6T6BWC2_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6BWC2_9RHOD)

HSP 1 Score: 219 bits (559), Expect = 2.210e-69
Identity = 99/171 (57.89%), Postives = 136/171 (79.53%), Query Frame = 0
Query:   19 RVKTVLVGDGSVGKTCMVYSYAENKFPTDYVPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRQDPVEIERLRQRGEAPLSSEEGEKVSRSIGADSFFECSALTQEGLKDVFDEAL 189
            +VK V+VGDGSVGKTCM++SYA N+FPT+YVPTVFDT+TA+V +      LE+ DTAGQ+DY+RLRAL+Y  T+V +LCYS+V + S EN+  +WAPE++   P + +ILCG K DLR DPV +E+L+++G  P+S+ +GE++   +GA +F ECSALT+EGLKDVFDEA+
Sbjct:    7 KVKIVIVGDGSVGKTCMLHSYARNEFPTEYVPTVFDTYTASVRISEDLVGLEIWDTAGQDDYDRLRALTYFNTNVIVLCYSVVSKASFENVLNKWAPEVQFRCPDAAVILCGTKTDLRTDPVTLEKLKKKGHYPISTLQGERMQTKVGASAFMECSALTKEGLKDVFDEAI 177          
BLAST of Gchil5446.t1 vs. uniprot
Match: G4T953_SERID (Related to Rac1 GTP binding protein n=2 Tax=Serendipita TaxID=358905 RepID=G4T953_SERID)

HSP 1 Score: 214 bits (546), Expect = 1.410e-67
Identity = 99/181 (54.70%), Postives = 134/181 (74.03%), Query Frame = 0
Query:   20 VKTVLVGDGSVGKTCMVYSYAENKFPTDYVPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRQDPVEIERLRQRGEAPLSSEEGEKVSRSIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPR 200
            +K V+VGDG+VGKTC++ SY  N FP +Y+PTVFD +TA V VDG+  +L L DTAGQEDY+RLR LSY +TDVF++C+S+V  PS EN+  +W PEI   +PG   +L G K+DLR+DP  IE+LR+R  AP++ ++G  + + IGA  F ECSALTQ+GLK+VFDEA+ +   P  KP+
Sbjct:    5 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYTAQVMVDGKTISLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSLVSPPSFENVRSKWYPEINHHAPGVPKLLVGTKLDLREDPASIEKLRERRMAPVTYQQGVSMHKEIGATKFLECSALTQKGLKNVFDEAIRAVLYPTAKPK 185          
BLAST of Gchil5446.t1 vs. uniprot
Match: A0A162UHE7_PHYB8 (Uncharacterized protein n=3 Tax=Mucorales TaxID=4827 RepID=A0A162UHE7_PHYB8)

HSP 1 Score: 214 bits (545), Expect = 1.810e-67
Identity = 98/182 (53.85%), Postives = 136/182 (74.73%), Query Frame = 0
Query:   20 VKTVLVGDGSVGKTCMVYSYAENKFPTDYVPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRQDPVEIERLRQRGEAPLSSEEGEKVSRSIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPRR 201
            +K V+VGDG+VGKTC++ SY  N FP +Y+PTVFD ++A V VDG+P  L L DTAGQEDY+RLR LSY +TDVF++C+S+V  PS EN++ +W PEI   +P + MIL G K+DLR+DP  I +LRQ+  AP++  +  ++++ IGA  + ECSALTQ+GLK+VFDEA+ +   P P P+R
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPPSFENVKTKWYPEISHHAPNTPMILVGTKLDLREDPETIAKLRQKHMAPITYSQSLQMAKDIGAVKYLECSALTQKGLKNVFDEAIRAVLCPAPPPKR 185          
BLAST of Gchil5446.t1 vs. uniprot
Match: A0A165IZP5_EXIGL (Rac1 GTP binding protein n=2 Tax=Agaricomycetes incertae sedis TaxID=355688 RepID=A0A165IZP5_EXIGL)

HSP 1 Score: 214 bits (545), Expect = 1.870e-67
Identity = 97/181 (53.59%), Postives = 136/181 (75.14%), Query Frame = 0
Query:   20 VKTVLVGDGSVGKTCMVYSYAENKFPTDYVPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRQDPVEIERLRQRGEAPLSSEEGEKVSRSIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPR 200
            +K V+VGDG+VGKTC++ SY  N FP +Y+PTVFD ++A V VDG+  +L L DTAGQEDY+RLR LSY +TDVF++C+S+V  PS EN+  +W PEI   +P +  +L G K+DLR+DP  IE+LR+R  +P+S ++G  +++ IGA  + ECSALTQ+GLK VFDEA+ +  +P PKP+
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKTISLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPPSYENVRTKWHPEISHHAPSTATLLVGTKLDLREDPQTIEKLRERRMSPISYQQGVSMAKDIGAAKYLECSALTQKGLKTVFDEAIRAVLNPQPKPK 184          
BLAST of Gchil5446.t1 vs. uniprot
Match: R1DYV5_EMIHU (Rac1, RHO family GTPase n=3 Tax=Eukaryota TaxID=2759 RepID=R1DYV5_EMIHU)

HSP 1 Score: 214 bits (544), Expect = 3.220e-67
Identity = 99/188 (52.66%), Postives = 138/188 (73.40%), Query Frame = 0
Query:   17 LVRVKTVLVGDGSVGKTCMVYSYAENKFPTDYVPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRQDPVEIERLRQRGEAPLSSEEGEKVSRSIGADSFFECSALTQEGLKDVFDEAL---LSAWDPLPKPRR 201
            +  VK V+VGDG+VGKTC++ SY  N FP DY+PTVFD ++A V VDG+P  L L DTAGQEDY+RLR LSY +TDVF++ +S++ RPS EN++++W PE+K   P    IL G K+DLR D   + +LRQ+ + P+S EEG++++++IGA  + ECSALTQ+GLK+VFDEA+   L    P  KP++
Sbjct:    5 MTNVKCVIVGDGAVGKTCLLISYTTNAFPEDYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVAFSLISRPSYENVKQKWFPELKHHCPNCPFILVGTKLDLRSDGTTVAKLRQQNQTPISLEEGQEMAKTIGATKYLECSALTQKGLKNVFDEAIRVVLCPPAPAKKPKK 192          
BLAST of Gchil5446.t1 vs. uniprot
Match: A0A0B7MU44_9FUNG (Cell division control protein 42 homolog n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7MU44_9FUNG)

HSP 1 Score: 213 bits (543), Expect = 3.760e-67
Identity = 98/193 (50.78%), Postives = 142/193 (73.58%), Query Frame = 0
Query:   20 VKTVLVGDGSVGKTCMVYSYAENKFPTDYVPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRQDPVEIERLRQRGEAPLSSEEGEKVSRSIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPRRSAAAPTACCTI 212
            +K V+VGDG+VGKTC++ SY  NKFP++YVPTVFD +  TV + G P TL L DTAGQEDY+RLR LSY +TDVF++C+S+    S EN++ +W PE+    PG   ++ G ++DLR +P  IE+L ++ +AP+ ++ GEK++R +GA  + ECSALTQ+GLK+VFDEA+++A +P P+PR+   A   CC +
Sbjct:    5 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQVDLRDEPSVIEKLAKQKQAPIDADSGEKLARELGAVKYVECSALTQKGLKNVFDEAIVAALEP-PQPRK---AKRPCCIL 193          
BLAST of Gchil5446.t1 vs. uniprot
Match: S7QMP1_GLOTA (Small GTPase Rac1 n=9 Tax=Agaricomycetes TaxID=155619 RepID=S7QMP1_GLOTA)

HSP 1 Score: 213 bits (542), Expect = 5.500e-67
Identity = 97/183 (53.01%), Postives = 136/183 (74.32%), Query Frame = 0
Query:   20 VKTVLVGDGSVGKTCMVYSYAENKFPTDYVPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRQDPVEIERLRQRGEAPLSSEEGEKVSRSIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPRRS 202
            +K V+VGDG+VGKTC++ SY  N FP +Y+PTVFD ++A V VDG+  +L L DTAGQEDY+RLR LSY +TDVF++C+S+V  PS EN+  +W PEI   +P + ++L G K+DLR+DP  IE+LR+R  AP+   +G  ++R IGA  + ECSALTQ+GLK VFDEA+ +  +P P+ ++S
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKTISLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPPSFENVRTKWHPEISHHAPQTSIVLVGTKLDLREDPATIEKLRERRMAPIQYSQGVAMARDIGAVKYLECSALTQKGLKTVFDEAIRAVLNPPPREKKS 186          
BLAST of Gchil5446.t1 vs. uniprot
Match: A0A7S3ACI3_9EUKA (Hypothetical protein n=2 Tax=Prymnesiaceae TaxID=418967 RepID=A0A7S3ACI3_9EUKA)

HSP 1 Score: 214 bits (544), Expect = 5.750e-67
Identity = 97/177 (54.80%), Postives = 134/177 (75.71%), Query Frame = 0
Query:   13 NDDSLVRVKTVLVGDGSVGKTCMVYSYAENKFPTDYVPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRQDPVEIERLRQRGEAPLSSEEGEKVSRSIGADSFFECSALTQEGLKDVFDEAL 189
            N   +  VK V+VGDG+VGKTC++ SY  N FP DY+PTVFD ++A V VDG+P  L L DTAGQEDY+RLR LSY +TDVF++ +S++ R S EN++ +W PE+K  SPG+ MIL G K+DLR DP  +++L+++ + P+S EEG +++ +IGA  + ECSALTQ+GLK VFDEA+
Sbjct:   21 NMSMMQNVKCVIVGDGAVGKTCLLISYTTNAFPEDYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVAFSLISRSSFENVKAKWWPELKHHSPGAPMILVGTKLDLRSDPNTVQKLKEKNQTPISGEEGLEMANNIGAVKYLECSALTQKGLKTVFDEAI 197          
The following BLAST results are available for this feature:
BLAST of Gchil5446.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6E0_9FLOR3.010e-11991.62Cell division control protein 42-like n=2 Tax=Rhod... [more]
M2X0X3_GALSU7.330e-7156.48Cell division control protein 42 n=1 Tax=Galdieria... [more]
A0A6T6BWC2_9RHOD2.210e-6957.89Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
G4T953_SERID1.410e-6754.70Related to Rac1 GTP binding protein n=2 Tax=Serend... [more]
A0A162UHE7_PHYB81.810e-6753.85Uncharacterized protein n=3 Tax=Mucorales TaxID=48... [more]
A0A165IZP5_EXIGL1.870e-6753.59Rac1 GTP binding protein n=2 Tax=Agaricomycetes in... [more]
R1DYV5_EMIHU3.220e-6752.66Rac1, RHO family GTPase n=3 Tax=Eukaryota TaxID=27... [more]
A0A0B7MU44_9FUNG3.760e-6750.78Cell division control protein 42 homolog n=1 Tax=P... [more]
S7QMP1_GLOTA5.500e-6753.01Small GTPase Rac1 n=9 Tax=Agaricomycetes TaxID=155... [more]
A0A7S3ACI3_9EUKA5.750e-6754.80Hypothetical protein n=2 Tax=Prymnesiaceae TaxID=4... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 122..135
score: 38.28
coord: 43..59
score: 30.66
coord: 20..41
score: 40.73
coord: 60..82
score: 43.98
coord: 170..192
score: 30.95
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 20..195
e-value: 5.4E-12
score: 40.0
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 17..195
e-value: 3.9E-20
score: 82.9
NoneNo IPR availablePANTHERPTHR24072:SF17RHO-RELATED GTP-BINDING PROTEIN RHOJcoord: 15..212
NoneNo IPR availablePROSITEPS51419RABcoord: 13..213
score: 16.056812
NoneNo IPR availablePROSITEPS51420RHOcoord: 13..192
score: 20.901249
NoneNo IPR availableCDDcd00157Rhocoord: 20..188
e-value: 9.01262E-93
score: 267.102
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 22..195
e-value: 8.2E-85
score: 297.8
IPR001806Small GTPasePFAMPF00071Rascoord: 21..189
e-value: 1.5E-46
score: 157.9
IPR001806Small GTPasePROSITEPS51421RAScoord: 15..213
score: 15.664105
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 16..197
e-value: 9.0E-61
score: 206.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 20..188
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 20..166
e-value: 3.0E-30
score: 103.1
IPR003578Small GTPase RhoPANTHERPTHR24072RHO FAMILY GTPASEcoord: 15..212

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:1754065..1754706 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5446.t1Gchil5446.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 1754065..1754706 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5446.t1 ID=Gchil5446.t1|Name=Gchil5446.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=214bp
MARGGHTANPHQNDDSLVRVKTVLVGDGSVGKTCMVYSYAENKFPTDYVP
TVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSI
VHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRQDPVEIERLRQRGE
APLSSEEGEKVSRSIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPR
RSAAAPTACCTIA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom
IPR003578Small_GTPase_Rho