Gchil5432.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil5432.t1
Unique Name	Gchil5432.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	476

Homology

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BLAST of Gchil5432.t1 vs. uniprot
Match: A0A2V3J6H1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6H1_9FLOR)

HSP 1 Score: 510 bits (1313), Expect = 1.480e-175
Identity = 271/458 (59.17%), Postives = 337/458 (73.58%), Query Frame = 0

Query:   19 ILLVAVGT-AQAQSANPPPADPPPELEEGHSIFALSMSFTSSKLGFSIDVVNAARFLLSENVGIPLEKWVYTHGLVVDSAKLLFLIKLQVVVPTQVASEKEAEAKDFINSGQLDEEFSKLGLVDMQFRVTNAEAGASEVSLSPPTQPDLKELVDEWPSIAEGEEFSQLLDLYVQSPEILFPPVLKDAMLWFIANWTETLTEPASWYMPELAVLNSTRGEYIASLVHVGGENETEAVVEGGAAYVARGGLSQAIGDSGARGVNISVLPKVEVVGAEEEVARDGDEIGVDLLLRMSAPVSGITKEVVAILKASFAAATNTSEGAWWLAYAAPEVEENENGPFMVDVGVVVGKKQRLETVRLVAGVVRSRAVDHALWASGRTDVVVRLRPRLTAFKSNGSGGRAIRSTAATVAASIGGMVVVFAIGAGILCLLPREGNFGPVRSFLGQAEKKSGRVWRFGR 475
            I+L+A+ T  Q+Q    PP DPPP+++ G+S FALS+SF SS LGF+ +VV   + +LS+N+GIPLE WVY+ G VVD+   LF + L V+VP +     E+  + FI+SGQLDEEF+ +GL  M F +T+ E            + DL ELVD  P + EGEE S+LLDLYV SP I F PVLK+A+ WF  N T TLT+P+SWY+PEL VLNSTRG+YIA+LVHVG   E + V+   AAYVA GGL+QA+ +SGAR VNI++LP+V++   EE+ + D D I VD+L RMSAP+SGIT EVV I+KA  A  T T + AW L Y APEVEEN NGPF+ D+GV+V K Q++ETVRLVAG+VRSRA+DH LW  G TDV VRLRPRLT FKSNGSGG AI+STAATVAASI GM++V  IGAGILCLLPREGNFGPVRSFL + +K SG+VW F R
Sbjct:   22 IVLIALATLTQSQLVEVPPPDPPPDIQTGYSAFALSISFISSLLGFAPEVVQGMKAILSQNLGIPLEHWVYSSGRVVDATTSLFAVTLDVIVPMEEIKHGESLTRKFISSGQLDEEFATIGLSGMMFTLTDQEIVEEGTPTPKVPKSDLSELVDALPPLHEGEELSRLLDLYVVSPTIYFTPVLKEAIRWFAGNETNTLTDPSSWYLPELTVLNSTRGQYIATLVHVGNIGEADMVLNQSAAYVAHGGLTQALLESGARDVNITLLPRVKLAKPEEDPSIDSDLISVDILFRMSAPISGITNEVVEIMKARCADITETQQAAWRLKYVAPEVEENVNGPFITDLGVIVPKTQKVETVRLVAGLVRSRALDHGLWEGGHTDVRVRLRPRLTPFKSNGSGGNAIQSTAATVAASIAGMLIVVCIGAGILCLLPREGNFGPVRSFLAEVDK-SGKVWPFRR 478

The following BLAST results are available for this feature:

BLAST of Gchil5432.t1 vs. uniprot

BLAST of Gchil5432.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J6H1_9FLOR	1.480e-175	59.17	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 448..475
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 14..24
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 30..425
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 25..29
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..29
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..13
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 426..447
None	No IPR available	TMHMM	TMhelix		coord: 425..447

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004418_pilon	contig	tig00004418_pilon:1707994..1709421 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil5432.t1	Gchil5432.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004418_pilon 1707994..1709421 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil5432.t1 ID=Gchil5432.t1|Name=Gchil5432.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=476bp
MKVLHRSRLCRVKACITVILLVAVGTAQAQSANPPPADPPPELEEGHSIF
ALSMSFTSSKLGFSIDVVNAARFLLSENVGIPLEKWVYTHGLVVDSAKLL
FLIKLQVVVPTQVASEKEAEAKDFINSGQLDEEFSKLGLVDMQFRVTNAE
AGASEVSLSPPTQPDLKELVDEWPSIAEGEEFSQLLDLYVQSPEILFPPV
LKDAMLWFIANWTETLTEPASWYMPELAVLNSTRGEYIASLVHVGGENET
EAVVEGGAAYVARGGLSQAIGDSGARGVNISVLPKVEVVGAEEEVARDGD
EIGVDLLLRMSAPVSGITKEVVAILKASFAAATNTSEGAWWLAYAAPEVE
ENENGPFMVDVGVVVGKKQRLETVRLVAGVVRSRAVDHALWASGRTDVVV
RLRPRLTAFKSNGSGGRAIRSTAATVAASIGGMVVVFAIGAGILCLLPRE
GNFGPVRSFLGQAEKKSGRVWRFGR*