Gchil5404.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5404.t1
Unique NameGchil5404.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length288
Homology
BLAST of Gchil5404.t1 vs. uniprot
Match: A0A2V3J6L0_9FLOR (Protein mlo2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6L0_9FLOR)

HSP 1 Score: 280 bits (717), Expect = 8.860e-90
Identity = 145/277 (52.35%), Postives = 180/277 (64.98%), Query Frame = 0
Query:    5 KDEFNIGNEQSYSHNFLGRYCRCDREYDVRLAMAQCAMCEDWFHEKCYKLDKEASTEQPYDFDYEFTCNECVKKLPVLAEYYDLYGVWQSIQENANSLAGTCIRPKDGKPSTQAGSVDYMWQNGFRLSLCKCSDCMDMYEAKRVLYIVERNDFLPSVREVEDTELLGPNSPAKNEQIIEDLLRESEYGS-----PRPWKKKDFSKKGLRGPSSSGKRSAQKNPDSSKKRQTDLHGITKVENVRTMRERVKSFIEEAIRTNGASMTRVSLLQYRKDID 276
            KD  NIGNEQ Y HNF GRYCRCD EYD+ LAMAQCAMCEDWFHEKCYKL+  A+   PY+F+YEF C +CVK LP+LAEYY+ Y VW+ ++  A +   TC+RPK  K ST+ G+VDYMW  GFRL LC+C +CM+ Y+  RVLYIV+R+D L S  E +D+ELL    P  +  I+ DLL E E  S       P   K    K  R   S GK         +KKR+      T      + R+RV++F++EAIRTNGASM R SLLQYRKD++
Sbjct:   86 KDAENIGNEQCYGHNFEGRYCRCDTEYDIHLAMAQCAMCEDWFHEKCYKLEPSANHATPYEFEYEFICKDCVKILPILAEYYEYYSVWKDVEIPARNRGATCVRPKKVKLSTKPGTVDYMWVPGFRLDLCRCDECMEKYQEARVLYIVDRHDLLTSYVEADDSELL--KGPEGDVDIVLDLLNEPEESSLSGSVNTPMSTKYAKHKRER---SVGKALKSTPHSDAKKRKDSAEEATDPFKALSSRQRVEAFVKEAIRTNGASMNRESLLQYRKDLN 357          
BLAST of Gchil5404.t1 vs. uniprot
Match: R7QQP8_CHOCR (UBR-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQP8_CHOCR)

HSP 1 Score: 204 bits (518), Expect = 5.550e-60
Identity = 101/284 (35.56%), Postives = 160/284 (56.34%), Query Frame = 0
Query:    1 MNPEKDEFNIGNEQSYSHNFLGRYCRCDREYDVRLAMAQCAMCEDWFHEKCYKLDK----EASTEQPYDFDYEFTCNECVKKLPVLAEYYDLYGVW---QSIQENANSLAGTCIRPKDGKPSTQAGSVDYMWQNGFRLSLCKCSDCMDMYEAKRVLYIVERNDFLPSVREVEDTELLGPNSPAKNEQIIEDLLRESEYGSPRPWKKKDFSKKGLRGPSSSGKRSAQKNPDSSKKRQTDLHGITKVENVRTMRERVKSFIEEAIRTNGASMTRVSLLQYRKDIDA 277
            + P KD+ N+ NE  Y HNF+GRYCRCD  YD  LAM QCAMCEDWFHE C+K D       S+    D  YEFTC +CV  LPVL EYY+LY +W   +S  ++ +  +  C RP +   + + G++D++W+ GFRL+LC+C+DC  +Y+     YI++R DF+ +  + EDT +L   +   +E+I++D++ + ++   R   + D  +               + P ++    + +  +   E +  +R R+  F++E I +NG S+   SL  Y  D+ A
Sbjct:   88 LQPNKDDINLENESCYGHNFVGRYCRCDNTYDASLAMVQCAMCEDWFHENCFKTDSVRRGSKSSHNNLDLVYEFTCRDCVATLPVLTEYYELYNIWGRDKSRIKSPDRRSSRCTRPCNADIALKPGAIDFVWRQGFRLTLCRCTDCCKLYDTAGASYIIDRGDFIGAPAQ-EDTSILNATN---DEEILQDVI-DGDWRLSRKRNRDDVMES----------EPIPRKPAAASSSASPVGNLLSTEEISDIRSRISYFLKETIESNGGSINPDSLRGYLSDLKA 356          
BLAST of Gchil5404.t1 vs. uniprot
Match: A0A2V3J693_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J693_9FLOR)

HSP 1 Score: 169 bits (428), Expect = 5.920e-48
Identity = 91/241 (37.76%), Postives = 142/241 (58.92%), Query Frame = 0
Query:   42 MCEDWFHEKCYKLDK-EASTEQPYDFDYEFTCNECVKKLPVLAEYYDLYGVWQSIQENANSLAGTCIRPKDGKPSTQAGSVDYMWQNGFRLSLCKCSDCMDMYEAKRVLYIVERNDFLPSVREVEDTELLGPNSPAKNEQIIEDLLRESEYGSPRPWKKKDFSKKGLRGP--SSSGKRSAQKNPDSSKKRQT--DLHGITKVENVRTMRERVKSFIEEAIRTNGASMTRVSLLQYRKDIDA 277
            MCEDWFHEKC+K D    S   P+ F+YE TC +CV+ LPVLAEYY+L  VW+    +      +C+RPK+   +T+AG++DYMW  GFRL LCKC +CM++YEA +  YI +++DF+  + + EDT+ +            E  L E E   P   +++    +G R P  S+SG+   Q+     + +++  D    + V+    +R R+  F++EAI+TNG ++++  LLQ+  D+ A
Sbjct:    1 MCEDWFHEKCFKCDGIPRSQTSPFAFEYELTCKDCVRNLPVLAEYYELLSVWKKKGSHKKYKGNSCVRPKNVSVATKAGTLDYMWYPGFRLHLCKCEECMELYEAGKASYIADKSDFVSPLTDDEDTDQVXXXXXXXXXXEYE--LIEVEVEEPEQPERRKVFDEGARIPRKSASGENDTQQKASGIELQRSNRDSKKPSGVQERSAIRRRITDFLKEAIQTNGGNLSQDVLLQFMTDLKA 239          
BLAST of Gchil5404.t1 vs. uniprot
Match: A0A1X6NUW3_PORUM (UBR-type domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NUW3_PORUM)

HSP 1 Score: 97.4 bits (241), Expect = 1.300e-19
Identity = 70/242 (28.93%), Postives = 100/242 (41.32%), Query Frame = 0
Query:    9 NIGNEQSYSHNFLGRYCRCDREYDVRLA-MAQCAMCEDWFHEKCYKLDKEASTEQPY-----------------------DFDYEFTCNECVKKLPVLAEYYDLYGVWQSIQENANSLAGT-------------CIRPKDGKPSTQA--GSVDYMWQNGFRLSLCKCSDCMDMYEAKRVLYIVERNDFLPSVREVEDTELLGPN----------------SPAKNEQIIEDLLRESEYGSPR 195
            N GN +   HNF GRYC C+R Y      M QCA+CEDW+HE C       S  + +                         ++EF+C+EC K+LP LA+YY + GV     E  ++L G              C RP   + + +     +D+ W + +R  LC C  C DMY      ++V++  FL      ED E  G                  +PA   Q I D++R  +   PR
Sbjct:   87 NEGNTRG--HNFDGRYCGCNRLYSPEHGDMLQCAVCEDWWHEPCMGFPTRRSESRGHATGRIGGGASGFEIRYGERGRFPSENFEFSCHECTKRLPFLADYYPIRGV-----ELPHTLTGVDLTAARNKKVGDGCSRPAPSRLAERLIQSEMDFFWASHWRYDLCGCQTCSDMYTRLGCQFLVDKTYFL--FASDEDGEGAGXXXXXXXXXXXSEVGQAVTPADAAQAIADMVRRGDLSRPR 319          
BLAST of Gchil5404.t1 vs. uniprot
Match: E9HLB1_DAPPU (UBR-type domain-containing protein n=4 Tax=Daphnia TaxID=6668 RepID=E9HLB1_DAPPU)

HSP 1 Score: 94.0 bits (232), Expect = 2.270e-18
Identity = 53/182 (29.12%), Postives = 87/182 (47.80%), Query Frame = 0
Query:   10 IGNEQSYSHNFLGRYCRCDREY----DVRL-AMAQCAMCEDWFHEKCYKLDKEASTEQPYDFDY-EFTCNECVKKLPVLAEYYDLYGVWQSIQENANSLAGTCIRPKDGKPSTQAGSVDYMWQNGFRLSLCKCSDCMDMYEAKRVLYIVERNDFLPSVREVEDTELLGPNSPAKNEQIIEDL 185
            +     Y+HNF+G+YC C++ Y    D     M QC MCEDW H      +K  S   P D DY E  C+ C++K P L  Y        S+ ++A + +   +  +    +    +    W  G+R  LC+C  C+ MYE K++ Y+ +  D +      +  ++   N P+ NE+++E L
Sbjct:  131 VNENNVYNHNFMGKYCTCEKPYPDPEDTNPDEMVQCVMCEDWHH------NKHLSKTPPPDSDYSEMICDACMEKHPFLNAY-------SSLVDSAQTASSCKLESETIDKNQLNSNKAIFWPEGWRNRLCRCEKCLAMYEEKKIKYLTDDQDTVEHYE--QKGKMACVNRPSSNERLMEAL 297          
BLAST of Gchil5404.t1 vs. uniprot
Match: A0A024G4F9_9STRA (UBR-type domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G4F9_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 6.930e-17
Identity = 58/180 (32.22%), Postives = 91/180 (50.56%), Query Frame = 0
Query:    3 PEKDEFNIGNEQSYSHNFLGRYCRCDREYD-----VRLAMAQCAMCEDWFHEKCY-----KLDKEASTEQ--------PYDFDYEFTCNECVKKLPVLAEYYDLYGVWQSIQENANSLAGTCIRPKDGKPSTQAGSVDYM-WQNGFRLSLCKCSDCMDMYEAKRVLYIVERNDFLPSVRE 163
            P KD  N  N  +YS NF G+YC C R Y          M QC +CEDW HE+       K ++ AST          P DFD EF C  C+ KLP L  Y +        ++ + S        + GK ++++ +++ M W +G+R SLC+C DC+++Y+  ++ ++++  D L +  E
Sbjct:  115 PIKDSINERN--TYSQNFEGKYCVCHRPYPDPERKSPEVMIQCVICEDWLHEEHLFSAGTKKEENASTPNSPETSLVIPEDFD-EFICVACIAKLPFLKLYNN--------EDVSASSECKLAELRLGKKASRSEALEPMFWHSGWRNSLCRCVDCLNLYQDHKISFLLDSQDTLQAYEE 283          
BLAST of Gchil5404.t1 vs. uniprot
Match: UPI001C9C0E87 (putative E3 ubiquitin-protein ligase UBR7 n=1 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9C0E87)

HSP 1 Score: 87.8 bits (216), Expect = 3.440e-16
Identity = 60/181 (33.15%), Postives = 81/181 (44.75%), Query Frame = 0
Query:   10 IGNEQSYSHNFLGRYCRCDREY----DVRL-AMAQCAMCEDWFHEKCYKLDKEASTEQPYDFDYEFTCNECVKKLPVLAEYYDLYGVWQSIQENANSLAGT-------------CIRPKDGKPSTQAGSVDYMWQNGFRLSLCKCSDCMDMYEAKRVLYIVERNDFLPSVREVEDTELLGP 172
            I NE  Y+ NF G YC C R Y    D     M QC +CEDW+H K   L+    T Q   FD E  C  C++K   L  Y   Y V ++  +   S                 C  P+     T +GS    W  G+R SLC+CS+C+ MYE  +V +++   D L SV+  E+     P
Sbjct:  115 INNENKYNQNFDGVYCTCSRPYPDPEDTNNDEMLQCIICEDWYHSK--HLECPEGTPQDNSFD-EVVCAGCMRKHEFLWRYAPKYSVTKNSSKEEKSSTKDEENLDVTTVSTKDCSLPESKNEQTNSGSC--FWLEGWRSSLCRCSNCIKMYEDAKVSFLL---DPLDSVQAYEEAGKSNP 287          
BLAST of Gchil5404.t1 vs. uniprot
Match: A0A151Z9W3_9MYCE (Ubiquitin protein ligase E3 component n-recognin 7 n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z9W3_9MYCE)

HSP 1 Score: 86.7 bits (213), Expect = 1.200e-15
Identity = 59/211 (27.96%), Postives = 92/211 (43.60%), Query Frame = 0
Query:   13 EQSYSHNFLGRYCRCDREYDVRLAMAQCAMCEDWFHEKCYKLDKEAS-TEQPYDFDYEFTCNECVKKL-PVLAEYY-----------DLYGVWQSIQ----------------ENANSLAGTCIRPKDGKPSTQAGSVDYMWQNGFRLSLCKCSDCMDMYEAKRVLYIVERNDFLPSVREVEDTELLGPNSPAK-----NEQIIEDLLRES 189
            E  Y+HNFLGRYC CD  YD    M QC  C DW+HEKC +L+        P +FD +F C +CV K   +L +YY           +      +++                E    +   C +   GK   +   +D   + G+R  LCKC DCM +Y   +  ++ +  +    + E E+ E  G     K     +EQ+ E ++ ++
Sbjct:  150 ENHYNHNFLGRYCYCDSLYDYVEDMIQCIFCLDWYHEKCVQLNSNYPYAPDPNEFD-DFVCRDCVTKHHSILFQYYPQIRLDIKEEEEXXXXXDNVKKEEVXXXXXKDKEIKKEKEIVIDEICKKNSFGKSDVK---LDLFCKEGWRDQLCKCVDCMKLYNDNKFDFLFKLEEIEVGLEEEEEKEQ-GEEGKIKEIFQKSEQLFESMVPQT 355          
BLAST of Gchil5404.t1 vs. uniprot
Match: E0VFB1_PEDHC (UBR-type domain-containing protein n=1 Tax=Pediculus humanus subsp. corporis TaxID=121224 RepID=E0VFB1_PEDHC)

HSP 1 Score: 86.3 bits (212), Expect = 1.370e-15
Identity = 56/181 (30.94%), Postives = 85/181 (46.96%), Query Frame = 0
Query:    5 KDEFNIGNEQSYSHNFLGRYCRCDREYD-----VRLAMAQCAMCEDWFHEKCYKLDKEASTEQPYDFDYEFTCNECVKKLPVLAEYYDLY------------------GVWQSI---QENAN---SLAGTCIRPKDGKPSTQAGSVDYMWQNGFRLSLCKCSDCMDMYEAKRVLYIVERND 156
            KD+FN+ N  SY+ NF G YC C R Y      +   M QC +CEDWFH++        +   P D+  E  C EC++    L +Y DL+                   +  +I   QEN N   S   + +  K     T+ GS    W +G+R SLCKC +C+ MY+ +++ +++   D
Sbjct:  118 KDDFNVNN--SYNQNFTGIYCNCKRPYPDPDDTIDDEMIQCVICEDWFHKRHLN-----NNSIPSDYG-EMICYECMENHLFLWKYSDLHLKAKSSLDDSSNQKINNSSIKNNIDESQENKNEKESDVNSILNCKIKTVKTENGSGSTFWPDGWRKSLCKCDECLKMYDNEKISFLLSDTD 290          
BLAST of Gchil5404.t1 vs. uniprot
Match: A0A8J4PRE5_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PRE5_9MYCE)

HSP 1 Score: 84.0 bits (206), Expect = 9.080e-15
Identity = 46/159 (28.93%), Postives = 73/159 (45.91%), Query Frame = 0
Query:   13 EQSYSHNFLGRYCRCDREYDVRLAMAQCAMCEDWFHEKCYKLDKEASTEQPYDFDYEFTCNECVKKLP-VLAEYYDLYGVWQ--------SIQENANSLAGTCIRPKDG-------KPSTQAG-SVDYMWQNGFRLSLCKCSDCMDMYEAKRVLYIVER 154
            E  Y+HNF G+YC CD EYD +  M  C +C+DWFHE+C K + +       +   +F C +CV K    L  Y+D   V          S  +  N      I   +        KP+++    +D   +  +R  LCKC  C+  Y+ + + +I+ +
Sbjct:  132 ENKYNHNFNGKYCYCDSEYDYKEDMILCILCQDWFHEQCIKFNSKVDNIPDQEDFQDFICLDCVLKYDQFLLNYFDNISVVDKPTMAGAASTTKETNEKENVDIEKIEQQQENTCKKPNSKCNVKLDLFCKEDWRNQLCKCEKCIQFYKDQNIEFILTK 290          
The following BLAST results are available for this feature:
BLAST of Gchil5404.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6L0_9FLOR8.860e-9052.35Protein mlo2 n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
R7QQP8_CHOCR5.550e-6035.56UBR-type domain-containing protein n=1 Tax=Chondru... [more]
A0A2V3J693_9FLOR5.920e-4837.76Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NUW3_PORUM1.300e-1928.93UBR-type domain-containing protein n=1 Tax=Porphyr... [more]
E9HLB1_DAPPU2.270e-1829.12UBR-type domain-containing protein n=4 Tax=Daphnia... [more]
A0A024G4F9_9STRA6.930e-1732.22UBR-type domain-containing protein n=1 Tax=Albugo ... [more]
UPI001C9C0E873.440e-1633.15putative E3 ubiquitin-protein ligase UBR7 n=1 Tax=... [more]
A0A151Z9W3_9MYCE1.200e-1527.96Ubiquitin protein ligase E3 component n-recognin 7... [more]
E0VFB1_PEDHC1.370e-1530.94UBR-type domain-containing protein n=1 Tax=Pedicul... [more]
A0A8J4PRE5_9MYCE9.080e-1528.93Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 24..76
e-value: 8.4E-7
score: 38.6
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 22..80
e-value: 7.5E-11
score: 43.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..239
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..239
IPR040204E3 ubiquitin-protein ligase UBR7PANTHERPTHR13513E3 UBIQUITIN-PROTEIN LIGASE UBR7coord: 3..97
coord: 103..163
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 22..78
score: 8.5822
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 13..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:1554567..1555430 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5404.t1Gchil5404.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 1554567..1555430 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5404.t1 ID=Gchil5404.t1|Name=Gchil5404.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=288bp
MNPEKDEFNIGNEQSYSHNFLGRYCRCDREYDVRLAMAQCAMCEDWFHEK
CYKLDKEASTEQPYDFDYEFTCNECVKKLPVLAEYYDLYGVWQSIQENAN
SLAGTCIRPKDGKPSTQAGSVDYMWQNGFRLSLCKCSDCMDMYEAKRVLY
IVERNDFLPSVREVEDTELLGPNSPAKNEQIIEDLLRESEYGSPRPWKKK
DFSKKGLRGPSSSGKRSAQKNPDSSKKRQTDLHGITKVENVRTMRERVKS
FIEEAIRTNGASMTRVSLLQYRKDIDALNCVESAEGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR040204UBR7
IPR019787Znf_PHD-finger
IPR011011Znf_FYVE_PHD