Gchil5400.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5400.t1
Unique NameGchil5400.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length858
Homology
BLAST of Gchil5400.t1 vs. uniprot
Match: A0A2V3J6A7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6A7_9FLOR)

HSP 1 Score: 1028 bits (2659), Expect = 0.000e+0
Identity = 587/895 (65.59%), Postives = 664/895 (74.19%), Query Frame = 0
Query:    6 MDTSTVSKEGSHPPVVKLPPLEEEKISHIIEICNVTRDEAIRVLDACHMDETMAIERFLSGNEVSTWSEVSKKKKPAPHSRSASGPKGGWNHSRPSDRXXXXXXXXXXXXXS--FHSDNQSQLNGGRRGSRQHGQYGHHQRSKDSYSAKKWNQEVDTVQDVSES--VKTETQGCANTPIHSHVGDEPNTTNGIAVGTWQSPQKNQGPDDSVHASSTEVNSSAWSKTGSSSPSQEDPWSLKPLAEDPEPEPEVKPVHHEVKSASPVRVHDSAPKQPAASSSTSKPILNYAAAAAAGTSHEKHATQAEKSPITNSSVTKAIDTEPPVPEAIGEV--------------------------------TVNEP------IEASEPEEAAVDPSPSTAESVILEAPTSSPSAWSTPPVATETQSDKHLDESSTAVAVASAAVIGSEQNSGDSLSLQFGSFGLAGLDGVNWSTADQKTSEPIPMAMVTADAPAATTVREPSPPQTSAAAVSSTPVPPSVVSTTAPSVVPSAQLPASAPLDVSVAMSSAPEVRAPIPPSISAPISSGAAATGSGMFPMLQVGHGGSFPPPNYPNPYLVPSLHGYSPAIPSYDNSGELGSSRAPNLGPPGSMPHYDPASLPGMQSGTGKYGAIPGLGDISALQAGVQTGINKDGMHGGNSDVDKTATIGSSGLPSGMDPLAPPYLMAGYHSMQYPLYPFPTGPYGPPPGMAPGPNPFPYPTAGQVSSQGGRGGFGFDDASVGLGANSRNGSGLSESMYTPGGYLNTSMNHTNSQKNPNDGAYKPVRPNPGNSLGAMGMPGGIVHGMAYQDYTGGMPGVSSGVVAGG-PVSWNNRQPNSGRADGGNGPGMNQSMPGASQNSSVYAAGPGAPNGYWSHQQGGYYS 857
            M TST  K  + PPVVKLPPLEEEK+SHI+EICNV+RDEA+RVLDAC MDETMAIERFLSGNEVSTWSEVSKKKK APH+RS SGPKG W+ SRPSDRXXXXXXXXXXXXX   +H+D+Q   NG RRGSRQ GQY HHQR +DSY++KK NQE D+  D ++S  V    QG           +E    NG A  +       +  +      ST+VN + W   GS SPSQ DPW+  P  EDPEPEPE  PV HEVKS+SPVRVH+  PKQP ASSST KP LNYAAAAA GTSHEKH T ++++P+ ++ V    D + P  +   E                                 T  +P       ++ EP E  +DP+  T ++ +LE P    +AWS PP   E +SDKHLDESSTAVAVASAAVIGSEQN GDSLSLQFGSFGL GLDGVNWS  +QK S+P P   V+ +A     V EPSPPQTS                         QL +SAPL+V  A+SSAPE R  IPPS+SAP+SSGA ATGSGMFPMLQVGHGGSFPPPN+PNPYLVPSLHGYSPAIPSY+N+G+LGSSRAPNLGP GSMP YD  ++PGMQSG GKYGAIPGLGD++AL  GVQTG+ KDG+H GN+DVDK+++IG++GLPSGMDPLAPPYLMAGY SMQYPLYPFPTGPYGPPPGMAPGP+PFPYPTAGQVSSQGGRGGFGF+D +VGLGANSRNGSGLSESMYTPGGYLNTSM HT+SQKNP +GAYKPVRPN GN L  MGM GGIVHGMAY DYTGGMPGVSSGVV+GG P SWNNRQPN+GR DG NGPGMNQS+PGASQNSSVYAAGPGAPNGYWSHQQGGYYS
Sbjct:    1 MGTSTSLKTSTAPPVVKLPPLEEEKVSHIMEICNVSRDEAVRVLDACLMDETMAIERFLSGNEVSTWSEVSKKKKQAPHNRSGSGPKGAWSTSRPSDRXXXXXXXXXXXXXXXPYHNDSQPHSNGNRRGSRQQGQYSHHQRPRDSYASKKRNQEYDSAMDANDSWAVPDSMQGF----------EEQQPANGSANDSVSPADSPKWGESIAQEPSTDVNEAPWGNAGSVSPSQNDPWAASPAPEDPEPEPEANPVQHEVKSSSPVRVHELTPKQPIASSSTVKPNLNYAAAAATGTSHEKHGTTSDRAPVVSAPVPNVADLDTPPSQTTDETPPSAAAEGKKRRERGSRKPRAPRHDRERPRLYTATKPPLPSPETQSPEPLEPELDPTTPTPDTSMLETPAPPANAWSAPPATPEPKSDKHLDESSTAVAVASAAVIGSEQNGGDSLSLQFGSFGLGGLDGVNWSATEQKASDPTPAVSVSPEAQTVPPVPEPSPPQTSXXXXXXXXXXXXXXXXXXXXXXXXXQLQSSAPLEVPPAISSAPEARTQIPPSVSAPVSSGATATGSGMFPMLQVGHGGSFPPPNFPNPYLVPSLHGYSPAIPSYENNGDLGSSRAPNLGPAGSMPLYDHTAIPGMQSGNGKYGAIPGLGDMNALHGGVQTGMTKDGLHSGNTDVDKSSSIGTTGLPSGMDPLAPPYLMAGYPSMQYPLYPFPTGPYGPPPGMAPGPSPFPYPTAGQVSSQGGRGGFGFEDGNVGLGANSRNGSGLSESMYTPGGYLNTSMAHTSSQKNPTEGAYKPVRPNHGNGLSGMGMAGGIVHGMAYGDYTGGMPGVSSGVVSGGGPGSWNNRQPNNGRGDGANGPGMNQSIPGASQNSSVYAAGPGAPNGYWSHQQGGYYS 885          
BLAST of Gchil5400.t1 vs. uniprot
Match: R7QMI4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMI4_CHOCR)

HSP 1 Score: 291 bits (746), Expect = 6.520e-83
Identity = 211/463 (45.57%), Postives = 279/463 (60.26%), Query Frame = 0
Query:  408 GDSLSLQFGSFGLAGLDGVNWSTADQKTSEPIPMAMVTADAPAATTVREPSPPQTSAA--AVSSTPVPPSVVSTTAPSVVPSAQLPASAPLDVSVAMSSAPEVRAP--IPPSISAPISS--GAAATGSGMFPMLQVGHGGSFPPPNYPNPYLVPSLHGYSPAIPSYDNSGELGSSRAPNLGPPGSMPHYDPASLPGMQSGTGKYGAIPGLGDISALQAGVQTGINKDGMHGGNSDVDKTATIGSSGLPSGMDPLAPPYLMAGYHSMQYPLYPFPTGPYGPPPGM-APGPNPFPYPTAGQVS-SQGGRGGFGFDDASVGLGANSRNGSGLSESMYTPGGYLNTSMNHTNSQKNPNDGAYKPVRPNP--GNSLGAMGMPGGIVHGMAYQDYTGGMPGVSSGVVAGGP---VSWNNRQPNSGRADGGNGPGMNQSMPGASQNSSVYAAGPG-APNGYWSHQQGGYY 856
            G+SLSLQFGS GL GL+GVNWS A  K+SE +       D+     V +PS     +A  A S+TP   SVVS +                 V  A+ S  + +A   +P S S P+SS  G+ +  SG+FP+L V   GS+   NY  PYL+P +HGYSPAI S+++SG+ GS+R+   GPPGS+   DP SL G+ SG GK+  IPGLGD+ A+ + V     KD +H   +D+D T  + SSGLP+G+DPL  PY++ GY S+QYP+Y FP  PY  PP M A GPN FPYP AGQV  +Q  RGGFGFDD SV LG  +R+ SG+ ES+YTPG YL +S  H+N+QK  ++ +YK +R  P  G+SLG +G+ GG VHG+AY +Y+    G  +    G     + WN R+  SGR +  N  G        SQ S++Y  GPG AP GYW+  QGGYY
Sbjct:  333 GESLSLQFGSLGLNGLEGVNWS-ASGKSSESVSAVTEGDDS---CIVGDPSVTTHGSASNAPSNTPGAVSVVSRS-----------------VHAAIGSPADRKADKLLPNSASVPVSSPSGSKSARSGVFPVLPVAPAGSYATANYGPPYLIPQVHGYSPAIGSFESSGDAGSARSLKAGPPGSLSLNDPVSLSGLASGNGKFAGIPGLGDLPAVPS-VPGATRKDSLHE-IADIDDTCGLSSSGLPAGIDPLGAPYMLPGYPSIQYPVYAFPNAPYPAPPAMTAAGPNQFPYPHAGQVGPAQSSRGGFGFDDGSVTLGR-TRSSSGMGESVYTPGAYLPSS--HSNTQKVSSEASYKHMRAPPPTGSSLGPLGVGGGFVHGVAYSEYSPTTGGAGTNTFVGNNGTNMGWNGREGLSGRTE--NASGSRPVSHAGSQASALYPNGPGGAPAGYWA-LQGGYY 766          
The following BLAST results are available for this feature:
BLAST of Gchil5400.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J6A7_9FLOR0.000e+065.59Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QMI4_CHOCR6.520e-8345.57Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 682..713
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 727..771
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 800..814
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 241..265
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 727..754
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..389
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 800..857
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 824..839
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 358..380
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 24..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:1540662..1543581 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5400.t1Gchil5400.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 1540662..1543581 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5400.t1 ID=Gchil5400.t1|Name=Gchil5400.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=858bp
MAPVSMDTSTVSKEGSHPPVVKLPPLEEEKISHIIEICNVTRDEAIRVLD
ACHMDETMAIERFLSGNEVSTWSEVSKKKKPAPHSRSASGPKGGWNHSRP
SDRDRDRDRRDRDRDRSFHSDNQSQLNGGRRGSRQHGQYGHHQRSKDSYS
AKKWNQEVDTVQDVSESVKTETQGCANTPIHSHVGDEPNTTNGIAVGTWQ
SPQKNQGPDDSVHASSTEVNSSAWSKTGSSSPSQEDPWSLKPLAEDPEPE
PEVKPVHHEVKSASPVRVHDSAPKQPAASSSTSKPILNYAAAAAAGTSHE
KHATQAEKSPITNSSVTKAIDTEPPVPEAIGEVTVNEPIEASEPEEAAVD
PSPSTAESVILEAPTSSPSAWSTPPVATETQSDKHLDESSTAVAVASAAV
IGSEQNSGDSLSLQFGSFGLAGLDGVNWSTADQKTSEPIPMAMVTADAPA
ATTVREPSPPQTSAAAVSSTPVPPSVVSTTAPSVVPSAQLPASAPLDVSV
AMSSAPEVRAPIPPSISAPISSGAAATGSGMFPMLQVGHGGSFPPPNYPN
PYLVPSLHGYSPAIPSYDNSGELGSSRAPNLGPPGSMPHYDPASLPGMQS
GTGKYGAIPGLGDISALQAGVQTGINKDGMHGGNSDVDKTATIGSSGLPS
GMDPLAPPYLMAGYHSMQYPLYPFPTGPYGPPPGMAPGPNPFPYPTAGQV
SSQGGRGGFGFDDASVGLGANSRNGSGLSESMYTPGGYLNTSMNHTNSQK
NPNDGAYKPVRPNPGNSLGAMGMPGGIVHGMAYQDYTGGMPGVSSGVVAG
GPVSWNNRQPNSGRADGGNGPGMNQSMPGASQNSSVYAAGPGAPNGYWSH
QQGGYYS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009060UBA-like_sf