Gchil5381.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5381.t1
Unique NameGchil5381.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length489
Homology
BLAST of Gchil5381.t1 vs. uniprot
Match: A0A2V3J6C6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6C6_9FLOR)

HSP 1 Score: 409 bits (1052), Expect = 2.470e-134
Identity = 241/497 (48.49%), Postives = 316/497 (63.58%), Query Frame = 0
Query:    1 MLLPTESLDHCVHGFFFDLVQNPSSPPTTNIGRYAYSS--GELFKCSRVQGTSPANPTVTISRLILVNRTIFLLDTVVVSFCYPTLTCVPDDILLYSRHLSFHKIATSFPTPSTPDGSFLGLAHFGMYDTLPLPCRIPPGMQRADSTNSFRAVPAHIAICHAPRSMLVGMHQDLLDRLRASFVQLIATDARLSVPMRTVDAFTPSRMNDAPQRRTMSSQHHQPSYVSQSSQPHQLQQQFSFSPQLIPSVDDPMNPAANN----PRPYADCRIDIPRIPSDMRAVSSHQPTSQRL---ISNNGIHDSSTVLPHDIAPSIVHVNPQLVPNSDPDVSLSTAGPDSVHRASHGSQRILPGNGADITPTVRVNEVAAGLPRLXXXXXXXXXXNTSSNVIFPEATDNAATIVNKPPSEQPVPPFTKTLPAPTKSEIVIRNRISAQRSNEKRRRRIENTKMELAYLKAYLPSLEQRKGCLMEENHSLKLRCIQRYRETDIESFF 488
            +LLP++S    V GF+ D  Q  SSP TT +GRY YSS  GELFKC+R+ GTSP++PTV ISR+I+VN ++FLLDTV++SF Y + T +PD+ LL+SRH S H ++    +PS  +GSFLGL+ FG+YD L L  R+PPGMQ+ + +   +A PAH+  C  PRS+L  +  + ++ L+ASFVQL+A ++R+S PMR +D F  +R+N+  QR T+  QH  P Y+S S+QP QL QQ S S QL+   DDP N   N+     + Y DCR+     P+D+R    H P        I + GIHD+ T+   +IA S+VH                                                         XXXXXXXXXX     + FPE T+NA+TIV KPP+EQ VPPF KTLPAPTKSEI+IRNRISAQRSNEKRRRRIE+TKMELAYLK+YLP+L++RKGCL+EEN SLK+R ++RYRE+D+ESFF
Sbjct:  100 LLLPSQSRGQSVLGFYVDHTQTHSSPVTTQLGRYTYSSVPGELFKCTRLDGTSPSSPTVAISRIIIVNPSVFLLDTVIISFRYASFTSIPDNALLHSRHFSCHNLSAPLSSPSGTEGSFLGLSDFGVYDALILQYRVPPGMQQVEPSPLLQAAPAHLERCPNPRSILTNVLHEHIESLQASFVQLVAVNSRISAPMRALDTFAQTRLNELSQRVTIPLQH-APPYISPSTQPVQLAQQLSLSAQLLHPGDDPTNSMPNSIPNTTQQYQDCRV-----PADIRVPLPHVPXXXXXXXXIPSTGIHDNPTIPARNIASSVVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGFPEVTENASTIVKKPPNEQAVPPFKKTLPAPTKSEIIIRNRISAQRSNEKRRRRIEHTKMELAYLKSYLPTLQRRKGCLLEENQSLKVRFMERYRESDMESFF 590          
BLAST of Gchil5381.t1 vs. uniprot
Match: R7QKB9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKB9_CHOCR)

HSP 1 Score: 138 bits (347), Expect = 9.320e-32
Identity = 155/534 (29.03%), Postives = 248/534 (46.44%), Query Frame = 0
Query:    1 MLLPTESLDHCVHGFFFDLVQNPSSPPTTNIGRYAY--SSGELFKCSRVQG--TSPANPTVTISRLILVNRTIFLLDTVVVSF-CYPTLTCVPDDILLYSRHLSFHKIATSFPT-------------PSTPDG--------SFLGLAHFGMYDTLPLPCRIPPGMQRADSTNSFR----AVPAHIAICHAPRSMLVGMHQDLLDRLRASFVQLIA-TDARLSVPMRT-VDAFTPSRMNDAPQRRTMSSQHHQPSYVSQSS-QPHQLQQQFSFSPQLIPSVDDPMNPAA------NNPRPYADCRIDIPRIPSDMRAVSSHQ--PTSQRLISNNGIHDSSTVLPHDIAPSIVHVNPQLVPNSDPDVSLSTAGPDSVHRASHGSQRILPGNGAD-ITPTVRVNEVAAGLPRLXXXXXXXXXXNTSSNVIFPEATDNAATIVNKPPSEQ---PVPPFTKTLPAPTKSEIVIRNRISAQRSNEKRRRRIENTKMELAYLKA-YLPSLEQRKGCLMEENHSLKLRCIQRYRETDIESFF 488
            +L+P ++    V G F +L  + +S      GRY Y  SS EL K S+V+G  T+    +V I+R+  +     + D VVVSF  +     VP   + +SR LS+ K+  +                P TP+         SF G+  FG++ +  +P R   G +       F     AVP+H+  C   R++L+G+  + +  LR+ FV +    +A+ + P+R+ V+           +      Q  +P   +QSS +  +L    + +  + P  +      A      +NP+P     +  PR  +++  +   +  P+SQ+     G  D  ++     +  ++ + PQ+      DV  + A   +V  A     ++ P +  D I   V V  VA+                  S+ I P +         +  SE      P F KTLPAPTK+EIVIRNRISAQRSNEKRRR+IE T+ ELAYL+  YLP L+ R+G L+ EN +L+ R +++Y++  IESFF
Sbjct:   22 LLVPCQTRLSVVAGHFIELATDDASNHMRT-GRYVYFSSSRELVKVSKVRGPVTAAMLSSVCINRICPIGSGSIVQDHVVVSFPWHRNAGKVPARCVAHSRTLSYSKMLQTAKDAGFAGYGGVGDVMPLTPESGIARVLENSFHGIGSFGVFASTIVPSRFGFGAEAEGHRTPFEVGQWAVPSHMLSCRNFRTLLLGIEANDITSLRSHFVTMYGHVNAQGTRPLRSSVNLSHRQNQGATGEADIRGHQRLEPGAPTQSSVRSMELLSLSAENSGVAPITEAEAFRGARTTGIGSNPQPPPPFAMGAPRAETNVTGMGEVRGGPSSQK-----GGRDMGSLPTFGSSGLLLPIQPQM------DVPRTQAFSSAVDEAL----KVGPSSVVDTIEAAVSVEPVASSPGVHTGATSALVAPGGPSSGITPASVGGRVQEGGEKKSEVVSVSAPTFKKTLPAPTKNEIVIRNRISAQRSNEKRRRKIEATRTELAYLRTTYLPQLQHRRGSLLTENQTLRQRFMEKYQQQGIESFF 539          
The following BLAST results are available for this feature:
BLAST of Gchil5381.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J6C6_9FLOR2.470e-13448.49Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QKB9_CHOCR9.320e-3229.03Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 206..245
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..256
NoneNo IPR availableCDDcd14686bZIPcoord: 423..472
e-value: 1.30422E-7
score: 45.9993

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:1339580..1341046 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5381.t1Gchil5381.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 1339580..1341046 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5381.t1 ID=Gchil5381.t1|Name=Gchil5381.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=489bp
MLLPTESLDHCVHGFFFDLVQNPSSPPTTNIGRYAYSSGELFKCSRVQGT
SPANPTVTISRLILVNRTIFLLDTVVVSFCYPTLTCVPDDILLYSRHLSF
HKIATSFPTPSTPDGSFLGLAHFGMYDTLPLPCRIPPGMQRADSTNSFRA
VPAHIAICHAPRSMLVGMHQDLLDRLRASFVQLIATDARLSVPMRTVDAF
TPSRMNDAPQRRTMSSQHHQPSYVSQSSQPHQLQQQFSFSPQLIPSVDDP
MNPAANNPRPYADCRIDIPRIPSDMRAVSSHQPTSQRLISNNGIHDSSTV
LPHDIAPSIVHVNPQLVPNSDPDVSLSTAGPDSVHRASHGSQRILPGNGA
DITPTVRVNEVAAGLPRLSSRVLPANSANTSSNVIFPEATDNAATIVNKP
PSEQPVPPFTKTLPAPTKSEIVIRNRISAQRSNEKRRRRIENTKMELAYL
KAYLPSLEQRKGCLMEENHSLKLRCIQRYRETDIESFF*
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