Gchil537.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil537.t1
Unique NameGchil537.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length633
Homology
BLAST of Gchil537.t1 vs. uniprot
Match: A0A2V3J5V7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5V7_9FLOR)

HSP 1 Score: 756 bits (1951), Expect = 2.640e-267
Identity = 365/617 (59.16%), Postives = 480/617 (77.80%), Query Frame = 0
Query:    1 MKIAVIGGNLLGCATALDLALVEEHDKSSFA-SDDHFSVTILERQAALGGNSLRSVQIDDYFNVEVGSYATLPILQGTFLYDLIDTANDGRGTIPVFNRRVPMPGSTVSRRGHVQAAVVKKPWASGSYRSIIRSYALWNWGDDKYSLVHTGWSLFDVLYRVLNNNIWRTVAFSFFLYSAEQLRTKVAGKINRAILMAQCLVLLVLAVLSPKQVVKMWQENYSFWGTTLTLLLKYGITPAIARGSVVGFTKMISRMNTRNVATCSISVGSLVRRAEFDSYLRSTAMDYTTQFQYKREYVDRHIAPTVIQEYTGSGMKRVNALALQFSMLDSDPMNSDAKNRFCTIAPNNAALCTSLINAAKATTPVDIKLDTTVTAIVFDEESKKYNITYSEGNSESFDGVVLCASPKEGEMTIDTPIGNSLSSMLGYVRDAETAHEAANEQSIVEAPESSTTAEQEPEEEIVPSSSCSNVAVVVGKAQSSFFRFADEKKIPDCIDVVNAPGFSRFERVREMSSEKPGVYKIICGENFVTSGLLHEMFEEGAQLKYFEPIARNAYSVSVLPRQKHVDDCMPYLVLGTHFIYAKALRRIAKHPEMDAIAAVNSASLFSKAVHWGSENEK 616
            M+IAVIGGNLLGCAT LDLALV+E D  + + S   F VTILE Q  LGGNSLRS+ ++D   VEVG+Y TLPIL GT+L DL+ T ND R TI +FN+R+ +PGST++RRGH  AA + +PW++G+  S++RSYA+W+W +D+Y L H+GW L D+L+R LNNNIWR++  +  +YS EQLRT V G+INRA ++AQC+  LVL VLSP+++V MWQ NYSFWGTT  LL+KYGITPAI RGS  GF K +S+MNTRNVATCSISVG+LVRRAE DSYLRSTAMD+  QF+Y  EYV RHI P ++Q+  G+ +  VNALALQFS+LDSDP+N+DA++R CTI+P+NA LC +L++AAKAT PV +KL+TTVTAI+++E + +Y+IT+++G SESF+GVVLC SP EG MTIDTP+G+SLS MLGY RD + A ++A E++       +       ++  VP  +C+++AV+ GK +SSFFRFADE++IPD IDV++AP F RFERVRE+S ++ GVY ++   +F +SGL  +MFE  A++ +FE +  N YS + LPR  H+D+CMPY+VLGTHFI AKA R IAKHPEMDAIAAVN+ASLFS+ + WG+E +K
Sbjct:    1 MRIAVIGGNLLGCATTLDLALVQELDNETPSDSTTVFEVTILETQPRLGGNSLRSIALEDESRVEVGAYRTLPILPGTYLNDLVQTVNDERATISIFNKRISLPGSTIARRGHAGAATIHRPWSTGTNGSLVRSYAIWDWQNDQYPLRHSGWPLLDLLHRFLNNNIWRSITLAALIYSIEQLRTVVHGRINRATMLAQCIAFLVLTVLSPQRLVAMWQHNYSFWGTTAPLLIKYGITPAIVRGSTTGFVKHLSKMNTRNVATCSISVGTLVRRAELDSYLRSTAMDFVNQFKYDHEYVHRHIEPVLVQQSLGADINHVNALALQFSLLDSDPVNNDARDRLCTISPDNATLCAALVDAAKATMPVHVKLNTTVTAIIYNERTNEYDITFADGASESFEGVVLCTSPVEGGMTIDTPVGSSLSDMLGYERDKQAAQQSAEEEAAHRTTSQAGGDNITIQQPAVPPGACTHIAVIAGKPRSSFFRFADERRIPDTIDVLHAPKFCRFERVREISKDEGGVYAVLVAADFESSGLKEQMFEHNAKVLHFESVPSNPYSTTSLPRHAHIDNCMPYVVLGTHFINAKAFRSIAKHPEMDAIAAVNTASLFSRGIQWGTEEDK 617          
BLAST of Gchil537.t1 vs. uniprot
Match: A0A7S2ZDA5_9RHOD (Hypothetical protein n=5 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZDA5_9RHOD)

HSP 1 Score: 160 bits (405), Expect = 1.750e-38
Identity = 172/650 (26.46%), Postives = 282/650 (43.38%), Query Frame = 0
Query:    1 MKIAVIGGNLLGCATALDLA-----LVEEHDKSSFASDD----------HFSVTILERQAALGGNSLRSVQIDDYFNVEVGSYATLPILQGTFLYDLIDTANDGRGTIPVFNRRVPMPGSTVSRRGHVQAAVVKKPWASGSYRSIIRSYALWNWGDDKYSLVHTGWSLFDVLYRVLNNNIWR---TVAFSFFLYSAEQLRTKVAGKINRAILMAQCLVLLVLAVLSPKQVVKMWQENYSFWGTTLTLLLKYGITPAIARGSVVGFTKMISRMNTRNVATCSISVGSLVRRAEFDSYLRSTAMDYTTQFQYKREYVDRHIAPTVIQ-EYTGSGM--KRVNALALQFSMLDSDPMNSDAKNRFCTIAPNNAALCTSL-------INAAKATTPVDIKLDTTVTAIVFDEESKKYNITY-----SEGNSESFDGVVLCASPKEGEMTIDTPIGNSLSSMLGYVRDAETAHEAANEQSIVEAPESSTTAEQEPEEEIVPSSSCSNVAVVVGKAQSSFFRFADEKKIPDCIDVVNAPGFSRFERVREMSSEKPGVYKIICGEN-FVTSGLLHEMFEEGAQLKYFEPIARNAYSVSVLPRQKHVDDCMPYLVLGTHFIYAKALRRIAKHPEMDAIAAVNSASLFSKAVHWGSENEK 616
            M++A++GGNL GCATA  L      L +E++  +   +D          +F VTI E+ + LGGN L++  I+D   VE G  +TL    G ++ +++D  +                              + + W  G+    +RS+A+++  + +Y   H G+   D+L  V ++   R    V   F LY     R +++G + R   +A  + + +  VL P++ +     + +FW + +  L+ YG T A++RG+  GFT     M   N  T SI++G L  R    SY  + A      F++   +V RH + T +Q +Y  S +  K V+ LA       +D    D   R   I   NA LC +L       +NAA     V IK  +   A   +   + Y ++Y     +E   E F+G+VL  SP   E+T +TP  ++   + GY ++  T     N    +                          A+V G              +PD I   +   + + E V E  S+K  ++ +IC E      GL+ E+F    ++K  E  ++  Y           +D +P L+LGT FI A  + R++  PE D I+A N+ASLFS  V+W  E E+
Sbjct:    1 MRVAIVGGNLTGCATAWFLEKSYADLRKEYELRARCQEDDSDVLPPPPENFKVTIFEKSSVLGGNKLQTEIIEDVA-VEAGRNSTLHS-DGVYVGEVLDQMSS--------------------------ELELDRFWLEGTGYHSVRSFAIYDADNSEYLFRHGGYWGLDILKVVASSIFTRFLLLVGCGFALYHG---RFEMSG-LARLKTIAAAVFVFISLVLFPRRFLASVNRSLAFWSSAIVGLMTYGTTAALSRGASKGFTDHFKAMLKANATTKSITLGHLFNRCGLGSYSSTDAESAFRSFKFLPAFV-RHYSDTQLQVDYANSQLAAKDVSTLAAMLCQQRADVSEGDKVLR---IRGGNAKLCEALGRGSRQMLNAAA----VKIKKRS---AEEIESGKQAYILSYKIPAQAEPVEEEFNGIVLACSPNMEELTFETPGMDNSGDVFGYTKEILTTQTPRNRSRWL--------------------------ALVAGTLNHRCLGHLIADTVPDMILSTSGKDWLKIECVAE--SKKGKIWSVICTEEPKAGEGLIAELFTNVREMKVRER-SQPKYKTREFINGVDGND-VPSLILGTRFINAAGMDRLSCDPETDIISAWNAASLFSVGVNWMEEKEE 577          
BLAST of Gchil537.t1 vs. uniprot
Match: A0A7S3E6H6_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E6H6_9RHOD)

HSP 1 Score: 96.7 bits (239), Expect = 3.970e-18
Identity = 94/356 (26.40%), Postives = 161/356 (45.22%), Query Frame = 0
Query:    1 MKIAVIGGNLLGCATALDLA-----LVEEHDKSSFASDD----------HFSVTILERQAALGGNSLRSVQIDDYFNVEVGSYATLPILQGTFLYDLIDTANDGRGTIPVFNRRVPMPGSTVSRRGHVQAAVVKKPWASGSYRSIIRSYALWNWGDDKYSLVHTGWSLFDVLYRVLNNNIWR---TVAFSFFLYSAEQLRTKVAGKINRAILMAQCLVLLVLAVLSPKQVVKMWQENYSFWGTTLTLLLKYGITPAIARGSVVGFTKMISRMNTRNVATCSISVGSLVRRAEFDSYLRSTAMDYTTQFQYKREYVDRHIAPTVIQ-EYTGSGM--KRVNALALQFSMLDSDPMNSD 335
            M++A++GGNL GCATA  L      L +E++  +   +D          +F VTI E+ + LGGN L++  I+D   VE G  +TL    G ++ +++D  +                              + + W  G+    +RS+A+++  + +Y   H G+   D+L  V ++   R    V   F LY     R +++G + R   +A  + + +  VL P++ +     + +FW + +  L+ YG T A++RG+  GFT     M   N  T SI++G L  R    SY  + A      F++   +V RH + T +Q +Y  S +  K V+ LA       +D    D
Sbjct:    1 MRVAIVGGNLTGCATAWFLEKSYADLRKEYELRARCQEDDSDVLPPPPENFKVTIFEKSSVLGGNKLQTEIIEDVA-VEAGRNSTLHS-DGVYVGEVLDQMSS--------------------------ELELDRFWLEGTGYHSVRSFAIYDADNSEYLFRHGGYWGLDILKVVASSIFTRFLLLVGCGFALYHG---RFEMSG-LARLKTIAAAVFVFISLVLFPRRFLASVNRSLAFWSSAIVGLMTYGTTAALSRGASKGFTDHFKAMLKANATTKSITLGHLFNRCGLGSYSSTDAESAFRSFKFLPAFV-RHYSDTQLQVDYANSQLAAKDVSTLAAMLCQQRADVSEGD 323          
BLAST of Gchil537.t1 vs. uniprot
Match: A0A2V3J3C4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3C4_9FLOR)

HSP 1 Score: 75.1 bits (183), Expect = 1.750e-10
Identity = 128/624 (20.51%), Postives = 250/624 (40.06%), Query Frame = 0
Query:    1 MKIAVIGGNLLGCATALDLALVEEHDKSSFASDDHFSVTILERQAALGGNSLRSVQIDDYFNVEVGSYATLPILQGTFLYDLIDTANDGRGTIPVFNRRVPMPGSTVSRRGHVQAAVVKKPWASGSYRSIIRSYALWNWGDDKYSLVHTGWSLFDVLYRV--LNNNIWRTVAFSF----FLYSAEQLRTKVAGKINRAILMAQCLVLLVLAVLSPKQVVKMWQENYSFWGTTLTLLLKYGITPAIARGSVVGFT-KMISRMNTRNVATCSISVGSLVRRAEFDSYLRSTAMDYTTQFQYKREYVDRHIAPTVIQEYTGSGMKR-VNALALQFSMLDSDPMNSDAKNRFCTIAPNNA-ALCTSLINAAKATTPVDIKLDTTVTAIVFDEESKKYNITYSEGNSES-----FDGVVLCASPKEGEMTIDTPIGNSLSSMLGYVRDAETAHEAANEQSIVEAPESSTTAEQEPEEEIVPSSSCSNVAVVVGKAQSSFFRFADEKKIPDCIDVVNAPGFSRFERVREMSSEKPGVYKIICGENFVT-SGLLHEMFEEGAQLKYFEPIARNAYSVSVLPRQKHVDDC-MPYLVLGTHFIYAKALRRIAKHPEMDAIAAVNSASLFSKAV 608
            M++A+IGGNLLGCATA            +  ++ H  + I ER++ LGGN L +       +  +GS  T  +        L+  A            R+ +  S V R       +    +   S  S++  Y            +H+   +  +L ++  L+   +   AFS     FL  A    T          L A C       V SP  +       + FW   L   + YG        SV+      +S +   + A+  +++G L+       Y++ ++  + ++++   E +   I P ++  Y  S   R  +ALA+  +ML   P+ +  ++    ++  +A ++C +L  A+ A     + ++T VT +   + S ++++     +SE      +D V+L A       +    +G  L+  L     AE + ++ +  ++  A                        A+V G   + + R +    +P    V+N+   +  +R+      +P V++++ GE     S ++  +F+    +  ++   R  Y  + L   + +D    P  +LGT F+ A  + R+A    +D ++A+N+AS F + V
Sbjct:    1 MRVAIIGGNLLGCATAF----------YTRKANPHAHIHIFERRSRLGGNKLATRA-----HALLGSACTTDVSSAPLFLHLLSQA------------RIKLTCSPV-RAQWALFDLKLDSYKLSSMPSLLLRYC-----------IHS--RVIPILLQLASLSATAFFVNAFSRGTNPFLRYARSTPTPTVLHFPTLALFAACATFAFGLVPSPLMLRLFNFLFFVFW-VRLIAAITYGAESIAVLSSVINHMHNHLSAIVKHDAASSCVTLGHLLSACGLGKYVKQSSTAFFSKYRLHPELLPDTIHPALVHTYADSTAPRDASALAVLLAMLAKSPLPASQRSTPTILSSTDADSICPALATASSA----HLTMNTYVTDVR--KSSDRWHLFTQSNHSEKLSLGEYDAVILAAVVDPSRFSAHG-LGEHLAESLALT--AELSDKSTSRTTLNVAK---------------------YTAIVKGVINADYLRKSSPSALPTFTTVLNSVNCTEIQRL------EPDVWRVVTGERPTKDSNVIATLFQSVQSIISYDNPQR-PYGCAAL---EELDGSHAPTFILGTRFLNAACVDRVANDFNLDCLSAMNTASFFKEGV 542          
BLAST of Gchil537.t1 vs. uniprot
Match: R7QPA9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPA9_CHOCR)

HSP 1 Score: 60.8 bits (146), Expect = 5.510e-6
Identity = 81/366 (22.13%), Postives = 150/366 (40.98%), Query Frame = 0
Query:  257 RNVATCSISVGSLVRRAEFDSYLRSTAMDYTTQFQYKREYVDRHIAPTVIQEYTGSGMK---RVNALALQFSMLDSDPMNSD--AKNRFCTIAPNNAALCTSLINAAKATTPVDIKLDTTVTAIVFDEESKKYNITYSEGNSE-------SFDGVVLCASPKEGEMTIDTPIGNSLSSMLGYVRDAETAHEAANEQSIVEAPESSTTAEQEPEEEIVPSSSCSNVAVVVGKAQSSFFRFADEKKIPDCIDVVNAPGFSRFERVREMSSEKPGVYKIICGENFVT-SGLLHEMFEEGAQLKYFEPIARNAYSVSVLPRQKHVDDC-MPYLVLGTHFIYAKALRRIAKHPEMDAIAAVNSASLFSKAV 608
            R+ A+  +++G L+       Y + +  ++  +F  ++  +D  ++P + Q Y  S        NALA  F+ L   P+ +   AK  +      NA LC  ++ AA A    +++L   V ++    E++ Y ++ ++ N          FD V L A        ID  +  + ++   Y  D   A + A    +         A                ++++ G+ +  FF  +    I   + V+ +P  S  +RV +      GVY++   E     S LL  +F+    +   E   R  +   +    +++D    P  +LGT F+ A  + RIA  P +D ++A N+AS F   V
Sbjct:  258 RDAASSCVTLGHLLSACGTGKYAKVSVTEFFAKFHIQQSLLDDCVSPGLAQTYGNSACTAGPHTNALAGLFNALVRSPIPTSFRAKATYFDSEQTNA-LCPQVLKAAGA----ELRLGIDVRSVQKSGEAQ-YELSGTDANERHKLVSLGKFDAVALAA-------IIDPEVFKTDAT--DYALDQVLALDPALSGLLAGDVRVLNVARY--------------ISLIKGEVKPQFFNKSRASSIASHVTVLKSPNCSDVKRVAD------GVYRVASWEKPEHGSSLLSTVFQGATDIVSIERRPRRYHPAPI----RNLDGVGAPSFILGTRFMNAACVDRIANDPNLDILSARNTASFFRDGV 584          
The following BLAST results are available for this feature:
BLAST of Gchil537.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J5V7_9FLOR2.640e-26759.16Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S2ZDA5_9RHOD1.750e-3826.46Hypothetical protein n=5 Tax=Rhodosorus marinus Ta... [more]
A0A7S3E6H6_9RHOD3.970e-1826.40Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A2V3J3C4_9FLOR1.750e-1020.51Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QPA9_CHOCR5.510e-622.13Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010795Prenylcysteine lyasePFAMPF07156Prenylcys_lyasecoord: 218..412
e-value: 1.7E-5
score: 24.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 611..632
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 189..208
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 209..219
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 220..240
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 241..632
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..188
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 1..407

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000060_piloncontigtig00000060_pilon:776048..777946 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil537.t1Gchil537.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000060_pilon 776048..777946 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil537.t1 ID=Gchil537.t1|Name=Gchil537.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=633bp
MKIAVIGGNLLGCATALDLALVEEHDKSSFASDDHFSVTILERQAALGGN
SLRSVQIDDYFNVEVGSYATLPILQGTFLYDLIDTANDGRGTIPVFNRRV
PMPGSTVSRRGHVQAAVVKKPWASGSYRSIIRSYALWNWGDDKYSLVHTG
WSLFDVLYRVLNNNIWRTVAFSFFLYSAEQLRTKVAGKINRAILMAQCLV
LLVLAVLSPKQVVKMWQENYSFWGTTLTLLLKYGITPAIARGSVVGFTKM
ISRMNTRNVATCSISVGSLVRRAEFDSYLRSTAMDYTTQFQYKREYVDRH
IAPTVIQEYTGSGMKRVNALALQFSMLDSDPMNSDAKNRFCTIAPNNAAL
CTSLINAAKATTPVDIKLDTTVTAIVFDEESKKYNITYSEGNSESFDGVV
LCASPKEGEMTIDTPIGNSLSSMLGYVRDAETAHEAANEQSIVEAPESST
TAEQEPEEEIVPSSSCSNVAVVVGKAQSSFFRFADEKKIPDCIDVVNAPG
FSRFERVREMSSEKPGVYKIICGENFVTSGLLHEMFEEGAQLKYFEPIAR
NAYSVSVLPRQKHVDDCMPYLVLGTHFIYAKALRRIAKHPEMDAIAAVNS
ASLFSKAVHWGSENEKPEGGEQDDGNCGVQNE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010795Prenylcys_lyase
IPR036188FAD/NAD-bd_sf