Gchil5360.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5360.t1
Unique NameGchil5360.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length639
Homology
BLAST of Gchil5360.t1 vs. uniprot
Match: A0A2V3J648_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J648_9FLOR)

HSP 1 Score: 761 bits (1965), Expect = 1.930e-269
Identity = 378/610 (61.97%), Postives = 475/610 (77.87%), Query Frame = 0
Query:   20 SKLNSKFAELGTDDINGLYFAVEKSLGELETQLEAARQTTERRVDGIDDFHATDLLPASCTVDQVSHMFTAAEVNEALHREDTEFMTRSSLVRRASSFRGKDGTAPMGTRRSASGTLIQEPREREDGRSKSVLGIYGSHGSPFKWNLSNYLQSVASTREKRIVAVSAWLLALIGLIISLVFVTKDFLASREQLSSTIGYEKTDAVQLPTLHLCTIGTELPPFSHLPNGPYQGQPLVWVDFIRATSSNVSFVYPETKSLPQVRVESFTAAGGRCIALNQMDPAHFESENTNPPSCFHCFTIERDSMFRLEEEKATSSKAPSHKFITRLSQNALVSRCRKTSFGLPFYLIEFFRDVFTHHSMDLKLLEILDYSGYDPQNEAHKYILWPKYRRGFQNKTRDSRMVDQADMFCNVYMFSGYFYPSTSVGVRYRFNSENFTWERSGAGPYYPKDFSSISGKQAALSSLTHSAIIGDEVLEERALYPGQNIFVMTNCSEDGTIELLGVVPAAKIAVLQLERNLILGQNESFQSQTVLEDVRSGDVRAQADVYVIEVSMLSFLTKVVGKQLSVSWSAFIADFFGLTSLFLDVSVYTLIISPLVMRARKRNLRIRKRQ 629
            S+L +   +L  DD NG +FA++ S+ E++TQLEA +    R  D  D+F ATD LPASC VD  SHMFTAAEV++ALHR+DT    +     + SS R K      G+ RS     +  P ER  G+++   G++GS  +P KW+LSNYLQSVASTREKR+VAVSAWL++L GLIISL FVTKDFLAS+E+L+STI YEKT  +QLPTLH CT GT+LPPF+ LPNG YQGQPLVW+DFI+ TSSNVS++YPETK LPQVRVES+T+AG  C AL QMDPA FE ENT  P+CFHCFT++R S+F+ +E   +++ + S+KF+ R+SQ+ALVSRCRKT FGLPF +++FFR    HH+ +LK+  I+DY  Y+P +E H+YILWP YRRGF+NK+ D+ M+D ADMFCNVYMFSGYFYPSTS G++YRFNSE++TW R+GAGPYYP+D++ + G+  A  S +H  +IG+EVLEERA+YPGQ++FVMTN S DG  ++L VVP   IA L+LERNL LG+NESFQS TVLEDV  GD+R  ADVYVI+VSM  FLTKV G+Q SVSWSAFIADFFGLTSLFLDVSVYT+I+SPL+++ARKR L+ RKRQ
Sbjct:   19 SRLQAAIQDLSNDDANGFFFAIDDSIQEIDTQLEAVQTLLVRSEDDADEFQATDNLPASCAVDLESHMFTAAEVSQALHRDDTGSRLQPVASSQGSSSRSK---RRFGSVRSQQHEQLN-PGER--GKTRLSRGMFGSRSTPIKWSLSNYLQSVASTREKRLVAVSAWLMSLAGLIISLAFVTKDFLASKEELASTIRYEKTTEIQLPTLHFCTTGTQLPPFAELPNGEYQGQPLVWLDFIKGTSSNVSYIYPETKDLPQVRVESYTSAGDACTALKQMDPAQFEKENTQAPACFHCFTVDRSSLFQFKEATGSNAGSVSNKFLVRVSQHALVSRCRKTQFGLPFDVLDFFRSTIAHHAPNLKVAGIVDYGDYNPTDEEHRYILWPSYRRGFKNKSTDTMMLDMADMFCNVYMFSGYFYPSTSPGIKYRFNSEDYTWVRTGAGPYYPQDYNLLVGRNRAFGSQSHVEVIGNEVLEERAVYPGQHLFVMTNYSADGVNDVLAVVPTDTIASLRLERNLALGKNESFQSDTVLEDVLGGDIRTMADVYVIDVSMQRFLTKVTGEQQSVSWSAFIADFFGLTSLFLDVSVYTVIVSPLIVQARKRKLKARKRQ 622          
BLAST of Gchil5360.t1 vs. uniprot
Match: R7QDA1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDA1_CHOCR)

HSP 1 Score: 102 bits (254), Expect = 4.630e-19
Identity = 107/465 (23.01%), Postives = 198/465 (42.58%), Query Frame = 0
Query:  186 AWLLALIGLIISLVFVTKDFLASREQLSSTIGYEKTDAVQLPTLHLCTIGTELPPFSHLPNGPYQGQPLVWVD-FIRATSSNVSF--------VYPETKSLPQVRV-------------ESFTAAGGRCIALNQMDPAHFESENTNPPSCFHCFTI---ERDSMFRLEEEKATSSKAPSHKFITRLSQNALVSRCRKTSFGLPFYLIEFFRDVFTHHSMDLKLLEILDYSGYDPQNEAHKYILWPKYRRGFQNKTR-DSRMVDQA-DMFCNVYMFSGYFYPST-SVGVRYRFNSENFT-WERSGAGPYYPKDFSSISGKQAALSSLTHSAIIG-DEVLEERALYPGQNIFVM----TNCSEDGTIEL---LGVVPAAKIAVLQLERNLILGQNESFQSQTVLEDVRSGDVRAQADVYVIEVSMLSFLTKVVGKQLSVSWSAFIADFFGLTSLFLDVSVYTLIISP 613
            AW  A+IG+I+++ F++KDF  ++  ++  I       ++LP + +C     LPPFS+ P   + G PL  +  +IR   +  SF          P+ +  P   V             + F A        +  +   FE  + N    F+CF +   +R+ ++  +     +   PS +    + ++ L+  CR         L   F       +  L+   ILD++G+       K +L         NKT  D ++V+   D +CNVY FSG+FYP+  +  + YR+N E    WE++G GPYY           A   + +   ++G D    E+  Y   +I +     T  + +  +     + ++  A  ++   ++  + G+N    +Q + +  R        D Y + +   +F T+ +    ++SW  F+ D F    LF  + ++TLI++P
Sbjct:  179 AWACAVIGMIVTIGFLSKDFYVAQRNIAIQIERSAPSPLELPAVTICGDTPNLPPFSNFPTDEHPGLPLFGITTYIRTNRTQSSFRKEIHFPDTLPDAEKSPVEEVVLAEDGERVNQLRKGFDARREMKSLRDVANTGSFEDLSENKMQAFYCFRVGRKKRELLYPFDPRDGANLFNPSLQ--VTVFKSRLLGACRIRFLQRDMVLYRAFAAELYLFADRLQERGILDFNGHP------KSVL---------NKTAYDLKIVNHPIDFYCNVYFFSGFFYPTLDNASISYRYNPEYPNLWEKTGRGPYY----------SAYTWNYSDPLLVGPDNRALEKDFYTLNSIRLFAEDPTEANNNSIVSPSTGMSILDMASSSIYSFKKMNVEGKNVYQMAQGLSQSSRLHF--KVVDHYQVNMDFSTFETERILTLPTMSWPEFLTDVFEFVGLFTGICIFTLIVAP 614          
BLAST of Gchil5360.t1 vs. uniprot
Match: A0A2V3J668_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J668_9FLOR)

HSP 1 Score: 95.1 bits (235), Expect = 9.920e-17
Identity = 117/532 (21.99%), Postives = 209/532 (39.29%), Query Frame = 0
Query:  116 SFRGKDGTAPMGTRRSASGTLIQEPREREDGRSKSVLGIYGSHGS-PFKWNLSNYLQSVASTREKRI--VAVSAWLLALIGLIISLVFVTKDFLASREQLSSTIGYEKTDAVQLPTLHLCTIGTELPPFSHLPNGPYQGQPLVWVD---FIRATSSNVS--FVYPET-------KSLPQVRVESFTAAGGRCIALNQMDPAHFE------------SENTNPPSCFHCFTIERDSMFRLEEEKATSSKAPSHKFITRLSQNALVSRCRKTSFGLPFYLIEFFRDVFTHHSMDLKLLEILDYSGYDPQNEAHKYILWPKYRRGFQNKTRDSRMVDQADMFCNVYMFSGYFYPSTSVG-VRYRFNSENFT-WERSGAGPYYPK-----DFSSISGKQAALSSLTHSAIIGDEVLEERALYPGQNIFVMTNCSEDGTIELLGVVPAAKIAVLQLERNLILGQNESFQSQTVLEDVRSGDVRAQADVYVIEVSMLSFLTKVVGKQLSVSWSAFIADFFGLTSLFLDVSVYTLIISP 613
            SF   DG   M      S T + +       +  ++L I  S+G  P K+            R+KR+  +   AW+ A+ G+++++ F+  DF  +++ ++  I   K   ++LP + LC   + +P FSH P   Y G PL  +        +SS+VS   +YP+T        SL +    S+  +  +C  +++      E            S +T   SC HC  +      +L   +             ++ +  L + C+         +   F      +S +LK   IL + G + +N    +         FQ            D  CNVY FSG+FYPS+ +  + Y +  ++   W ++G GPY+       +   I G         +  +   E+  E A    +   +            +  + AA+ A+ + +R    G+NE    ++       G      DVY +     +F TK +    +++W  FI D F    LF  + ++TLI++P
Sbjct:  110 SFDSDDGADGM----KRSSTRVTDDSTSVSSKGGALLSILKSNGKLPQKFGDPES----KGARDKRLFYLTTGAWIFAVFGMMVTIGFLAADFWYAQKNVAIQIESSKPRPLELPVVTLCNFISNVPHFSHFPTDEYPGLPLFGIQRFALYNRSSSSVSTDLIYPDTLPNSVDSDSLFEDVFVSWDIS--QCKKVDEGFDVEREMNTLRSNYDLGISGDTGSTSCQHCIRLGYKKRIKLTPPQHREEGLAPPAVNVKVYRTKLFAACQTGLHRRVSIIAALFVAEIQQYSTELKDRGILQFDGEEYRNINMNW---------FQEDNEQF-----FDFCCNVYFFSGFFYPSSDLADISYEYVPDSTEKWVQTGDGPYFSAFAWKANDHQIPGPSRDALEKDYFTLDSIEIFAEDADGINRTAAISPRTK-------ISAISAAQTALYKFKRVTNQGKNEYEIRRSTSNS--QGYQSTTIDVYDLHFDFDTFETKTILTTPTMTWPEFITDVFEFVGLFTGICIFTLIVAP 608          
BLAST of Gchil5360.t1 vs. uniprot
Match: R7QCX8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCX8_CHOCR)

HSP 1 Score: 83.6 bits (205), Expect = 3.970e-13
Identity = 106/473 (22.41%), Postives = 190/473 (40.17%), Query Frame = 0
Query:  170 LQSVASTREKRIVAVSAWLLALIGLIISLVFVTKDFLASREQLSSTIGYEKTDAVQLPTLHLCTIGTELPPFSHLPNGPYQGQPLVWVDFIRATSSNVSFVYPETKSLPQVRVESFTAAGGRCIALNQM-------DPAHFESENTNPPSCFHCFTIERDSMFRLEEEKATSSKAPSHKFITRLSQNALVSRCRKTSFGLPFYLIEFFRDVFTHHSMDLKLLEILDYSGYDPQNEAHKYILWPKYRRGFQNKTRDSRMVDQADMFCNVYMFSGYFYPSTS---VGVRYRFNSENFTWERSGAGPYYPKDFSSISGKQAALS-SLTHSAIIGDEVLEERALYPGQNIFVMTNCSEDGTIELLGV-----VPAA-KIAVLQLERN----LILGQNESFQSQTVLEDVRSGDVRAQADV-----YVIEVSMLSFLTKVVGKQLSVSWSAFIADFFGLTSLFLDVSVYTLIISPLVM 616
            ++ V    ++  ++  AW  A++G+++++ F+  DF +++   + +    + D + LP ++ C     +P F  LPN  Y+G  L  +       S  + ++P+T S+ +    SF      C  +++        D   FE + +    C  C  I R   FRL  E A  S  P        + + L+  C   S G    +    RDV      DL+  +I++       + A  Y  +  ++ G   + R+  +  +  + CN+Y FSG+F+P  S       Y  N    +W+  G    +   F S+S         ++  AI+     E R     +  FV+     D  IE+  V      P A K  V  L RN    L   +       T       G+ +    V     Y I +   +F T+V+ ++ + S + F+ D F    LF  +  Y++++ P  M
Sbjct:  107 IEEVTEEEQRSCISKCAWGFAILGMVVAISFLIADFWSAQVSPAISTNLVRNDDLVLPVIYACLSLPNIPIFEDLPNERYKGSSLWGLRSYENLESGENMMFPDTNSIAE---PSFLGNLDHCPNVSRKLSAEALKDALGFEPDPSK--RCHSCLRIGRKVPFRLNREAA--SVRPRGAITLEFASSRLLELCFNPSQGSNEVVKNGLRDVLKAQGEDLEKKKIVEIIAAPSLSFALNYG-FDDFKNG-NTELRNDGLQKELSVLCNLYFFSGHFFPVESGKETKYIYDLNGGVNSWKEVGNTSNF---FRSVSDTTLVSDIDVSREAILKSMTQENR-----EEAFVIA----DAGIEVFKVDDPSRPPGAYKDFVRSLRRNHRDTLSFTKKIDSGVSTYATSFHYGEQKIFKAVGLHRRYNISLDYKTFDTEVITRRPATSTAEFLTDVFEYVGLFTGICAYSVLVGPARM 558          
The following BLAST results are available for this feature:
BLAST of Gchil5360.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J648_9FLOR1.930e-26961.97Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QDA1_CHOCR4.630e-1923.01Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3J668_9FLOR9.920e-1721.99Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QCX8_CHOCR3.970e-1322.41Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..143
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 181..201
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..180
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 617..638
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 594..616
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 202..593
NoneNo IPR availableTMHMMTMhelixcoord: 594..616
NoneNo IPR availableTMHMMTMhelixcoord: 180..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:1274923..1276839 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5360.t1Gchil5360.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 1274923..1276839 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5360.t1 ID=Gchil5360.t1|Name=Gchil5360.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=639bp
MLRKRNVRKQDQNEDEPPESKLNSKFAELGTDDINGLYFAVEKSLGELET
QLEAARQTTERRVDGIDDFHATDLLPASCTVDQVSHMFTAAEVNEALHRE
DTEFMTRSSLVRRASSFRGKDGTAPMGTRRSASGTLIQEPREREDGRSKS
VLGIYGSHGSPFKWNLSNYLQSVASTREKRIVAVSAWLLALIGLIISLVF
VTKDFLASREQLSSTIGYEKTDAVQLPTLHLCTIGTELPPFSHLPNGPYQ
GQPLVWVDFIRATSSNVSFVYPETKSLPQVRVESFTAAGGRCIALNQMDP
AHFESENTNPPSCFHCFTIERDSMFRLEEEKATSSKAPSHKFITRLSQNA
LVSRCRKTSFGLPFYLIEFFRDVFTHHSMDLKLLEILDYSGYDPQNEAHK
YILWPKYRRGFQNKTRDSRMVDQADMFCNVYMFSGYFYPSTSVGVRYRFN
SENFTWERSGAGPYYPKDFSSISGKQAALSSLTHSAIIGDEVLEERALYP
GQNIFVMTNCSEDGTIELLGVVPAAKIAVLQLERNLILGQNESFQSQTVL
EDVRSGDVRAQADVYVIEVSMLSFLTKVVGKQLSVSWSAFIADFFGLTSL
FLDVSVYTLIISPLVMRARKRNLRIRKRQRHEKESNAS*
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