Gchil5344.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5344.t1
Unique NameGchil5344.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length299
Homology
BLAST of Gchil5344.t1 vs. uniprot
Match: A0A2V3IW41_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW41_9FLOR)

HSP 1 Score: 257 bits (657), Expect = 2.060e-81
Identity = 131/235 (55.74%), Postives = 166/235 (70.64%), Query Frame = 0
Query:   70 PPVPQRHKPPDLAQPPQHAXXXXXXXXXXXAFSQQLLSVAQVDAYGLPVVSGDIPVTYPQVFGLEEKVLGAIRGAFHIRDHQGVLRYKIDSKLSLHERKVLKDVNGHVMLKLREERLRLRDRITFFSPNNVPILTLQKASAVQFKNKCVNGYLGPETTGNPSIIITGNEDNTHFRIFNNQNQEVCNIRRRRATWK------NSLTDQDSYDVTVNYGCPALMCFIGVALDEIFED 298
            P  PQ H P   AQ P                SQQL S +Q+DAYGLPVV GD+PVTYP+ F LEE++LG IRG+F  RD QG LRYK++SK+S+HERKVLKD++G+V+LKLRE RL LRDRIT F+P ++PILTLQK S VQ   K V+GY GP+  G P +IITGN+D T F ++N QN  +C+++R  ++WK      N +T +D Y+VTVNYG PALM FI VA+DEI+ED
Sbjct:   90 PQDPQTHAPQTPAQTPSAPYH-----------SQQLYSASQLDAYGLPVVPGDLPVTYPETFRLEERLLGTIRGSFVARDQQGTLRYKVESKISVHERKVLKDMSGNVLLKLREARLTLRDRITLFTPTDIPILTLQKTSVVQMSEKRVHGYAGPQPGGTPILIITGNDDKTLFSVYNAQNHLMCSVQRETSSWKHMSTYKNMITGKDCYNVTVNYGSPALMLFIAVAIDEIYED 313          
BLAST of Gchil5344.t1 vs. uniprot
Match: R7Q331_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q331_CHOCR)

HSP 1 Score: 214 bits (544), Expect = 1.720e-64
Identity = 99/189 (52.38%), Postives = 139/189 (73.54%), Query Frame = 0
Query:  110 QVDAYGLPVVSGDIPVTYPQVFGLEEKVLGAIRGAFHIRDHQGVLRYKIDSKLSLHERKVLKDVNGHVMLKLREERLRLRDRITFFSPNNVPILTLQKASAVQFKNKCVNGYLGPETTGNPSIIITGNEDNTHFRIFNNQNQEVCNIRRRRATWKNSLTDQDSYDVTVNYGCPALMCFIGVALDEIFED 298
            Q+D +GLPVV  D P+ Y Q F LEEKVL A R +F I+D QGVLRYK+D  +SLH+RK + D++G ++LKLRE RL LRDRIT F+P +V ++ LQK +A+QF  K V+GY+G      P ++ITGN + T+++I N++ QE+ ++RR++ + KN LTDQD+Y VTV  G PA +CF+ V LDEI++D
Sbjct:  117 QLDRFGLPVVDNDPPLQYAQTFRLEEKVLSASRDSFSIKDAQGVLRYKVDGSISLHDRKSISDMHGRILLKLREARLHLRDRITIFAPTDVALMILQKTTAIQFGTKRVHGYIGGHIKHAPDLVITGNHNKTYYKIMNSRGQEIADVRRQKFSLKNMLTDQDTYHVTVKAGSPAFVCFLAVVLDEIYDD 305          
The following BLAST results are available for this feature:
BLAST of Gchil5344.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IW41_9FLOR2.060e-8155.74Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q331_CHOCR1.720e-6452.38Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038595LURP-one-related superfamilyGENE3D2.40.160.200coord: 118..298
e-value: 1.1E-22
score: 82.5
IPR007612LURP-one-relatedPFAMPF04525LORcoord: 126..281
e-value: 3.6E-16
score: 59.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..102
IPR025659Tubby-like, C-terminalSUPERFAMILY54518Tubby C-terminal domain-likecoord: 117..287

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:1173272..1174168 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5344.t1Gchil5344.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 1173272..1174168 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5344.t1 ID=Gchil5344.t1|Name=Gchil5344.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=299bp
MPQPLQMPYAMPPGMVPYSPYMQPYAPYAAPYAPLPQYAPQYAPPPYAPP
PYYSTPYAPHAYAPPPYAVPPVPQRHKPPDLAQPPQHAPQHTPQPAPQPA
FSQQLLSVAQVDAYGLPVVSGDIPVTYPQVFGLEEKVLGAIRGAFHIRDH
QGVLRYKIDSKLSLHERKVLKDVNGHVMLKLREERLRLRDRITFFSPNNV
PILTLQKASAVQFKNKCVNGYLGPETTGNPSIIITGNEDNTHFRIFNNQN
QEVCNIRRRRATWKNSLTDQDSYDVTVNYGCPALMCFIGVALDEIFED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038595LOR_sf
IPR007612LOR
IPR025659Tubby-like_C