Gchil533.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil533.t1
Unique NameGchil533.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length302
Homology
BLAST of Gchil533.t1 vs. uniprot
Match: A0A2V3IPQ5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPQ5_9FLOR)

HSP 1 Score: 293 bits (749), Expect = 1.010e-95
Identity = 158/274 (57.66%), Postives = 193/274 (70.44%), Query Frame = 0
Query:   26 SSACERSCALRFCGGPAVAFIGAPDAPATPAVCGPVGHGVMRRRALRRVGHTQLRLRGYKRLKRADKLGLNATLFKPVLAPLRFGG-SALALSTPLNDRQRQRLHGACAVVRVLEWG-DELASRSSARRRRXXXXXWHRRGRRADCVAFRVRVAELRVDLEWDSRDDLDLFVTQPDNKEVFFQSTSNSGHLLRDDNRRACGRATPGGVETAVYARALPTSGAYRVFAEHSRSCAQGATHWRLRIALRGRVISDVSGSSQLPLGGVIHTSVARFN 297
            S+AC RSC+LRFCGGP+ A+IGA   PATPAVC  +   +  R  +R VG   +RLRG +R  RA KLGL    FKPVLAPLR GG SALALS  +++  RQRLHGAC +V V  W  D  AS SSA                  CV+FRV V ++RVDLEWDSRDDLD+FVTQPD ++VFFQ TS  G LLRDDNRRACGR +PGG+ET VY  AL  +GAY+VFAEH+R+C +G+T WRLRIA++GR++ D+ G++ LPLGGVI  S + FN
Sbjct:   24 SNACARSCSLRFCGGPSRAYIGAAHTPATPAVCKSLSF-LRYRPTIRGVGPAHIRLRGRRRFVRASKLGLVPIPFKPVLAPLRVGGGSALALSPLVSNVDRQRLHGACVIVPVRSWHYDRSASPSSA-----------------PCVSFRVSVTDIRVDLEWDSRDDLDVFVTQPDGRQVFFQPTSTKGRLLRDDNRRACGRRSPGGLETVVYEGALQLTGAYKVFAEHTRNCGKGSTTWRLRIAVQGRIVHDIGGTTNLPLGGVIEDSRSSFN 279          
BLAST of Gchil533.t1 vs. uniprot
Match: R7Q9Z3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9Z3_CHOCR)

HSP 1 Score: 90.9 bits (224), Expect = 1.720e-17
Identity = 60/181 (33.15%), Postives = 91/181 (50.28%), Query Frame = 0
Query:  112 SALALSTPLNDRQRQRLHGACAVVRVLEWGDELASRSSARRRRXXXXXWHRRGRRADCVAFRVRVAELRVDLEWDSRDDLDLFVTQPDNKEVF-FQSTSNSGHLLRDDNRRACGRATPGGVETAVYARALP--TSGAYRVFAEHSRSCAQGATHWRLRIALRGRVISDVSGSSQLPLGGVI 289
            S+   ++ L   Q + L  +C +  ++++  EL  R    RRR         G   DCV+FR R A + VDL W+S DD D+ +T+PD   +  FQ  + +G +  D N  ACG     G ETA Y        +G YR  A H+ +C QG T W+L +++ G+V+    G S   LG ++
Sbjct:  120 SSAITTSELQGNQFKFLEDSCIIFPIVKY--ELLDR----RRRRVKRVVKTNGSEGDCVSFRTRTAAILVDLTWNSGDDFDIQITEPDGVTLSRFQPETKTGRINGDANSDACG-LIDFGRETARYLTTTDGVKNGIYRAEARHNVNCGQGGTKWKLEVSIDGKVVETKEGFSNGDLGDMV 293          
BLAST of Gchil533.t1 vs. uniprot
Match: R7Q9I4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9I4_CHOCR)

HSP 1 Score: 83.2 bits (204), Expect = 8.920e-15
Identity = 85/298 (28.52%), Postives = 124/298 (41.61%), Query Frame = 0
Query:   19 AALCIALSSACERSCALRFC--------GGPAVAFIGAPDAPATPAVCGPVGHGVMRRRALRRVGHTQLRLRGYKRLKRADKLGLNATLFKPV--LAPLRFGGSALALST-PLNDRQRQRLHGACAVVRVLEWG----DELASRSSARRRRXXXXXWHRRGRRADCVAFRVRVAELRVDLEWDSRDDLDLFVTQPDNKEVFFQST-SNSGHLLRDDNRRACGRATPGGVETAVYARALPT-SGAYRVFAEHSRSCAQGATHWRLRIALRGRVISDVSGSSQLPLGGVIHTSVARFNVS 299
            AAL +  S+ C ++C  RFC        G  A  F+ AP    +  +C P  +    R     V   Q +      + +    GL+ +  K    L PL+F      +        Q++ L   C V+ +  +G    DE  +R S              G R DCV+FR R   + ++L WDS DD DL VT+P+   V   +  +  G L  D+N  AC    P G E  +Y +     SG Y    +H  +C  G T +RLR+ + G V+   +G S  P      T V R N S
Sbjct:   13 AALALTASAQCGKTCRFRFCRLSDMSLRGKGARTFLRAPFTSLSGVICLPGSNVTDLRSGQAMV--AQGKDPNMVPISQFSPAGLDTSFPKRFFRLFPLQFVPEEQGMGRLRTRGNQQEFLDDLCVVLPITSYGEFEKDESITRVSG-------------GGRKDCVSFRTRNPMVLIELSWDSADDFDLEVTEPNGTVVSRDAPDAGVGELNNDNNVGACNIMIPAGKEAVLYRQEDELMSGDYTATIKHFNNCGDGRTRYRLRVIVDGEVVVFRTGLSNAPKD----TVVTRVNFS 291          
BLAST of Gchil533.t1 vs. uniprot
Match: R7Q2Y4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2Y4_CHOCR)

HSP 1 Score: 67.0 bits (162), Expect = 4.310e-9
Identity = 80/293 (27.30%), Postives = 116/293 (39.59%), Query Frame = 0
Query:   29 CERSCALRFCGG-------PAVAF--IGAPDAPATPAVCGP---VGHGVMRRRALRRVGHTQLRLRG-YKRLKRADKLGLN----ATLFKPVLAPLRFGGSALALSTPLNDRQRQRLHGACAVVRVLEWGDELASRSSARRRRXXXXXWHRRGRRADCVAFRVRVAELRVDLEWDSRDDLDLFVTQPDNKEVFFQSTSNS-GHLLRDDNRRACGRATP--GGVETAVYARALPT----SGAYRVFAEHSRSCAQGATHWRLRIALRGRVISDVSGSSQLPLGGVIHTSVARFN 297
            C   C  R C         P  +F  +GAP     P +C P   VG  +       + G  Q+   G Y  +      GL     +T  +P   P         LS+ +N  Q   LH  C ++ V  +  E+ + ++ R  R           R +CVAFR     + V L WDS+DD DL V +PD   + F++T    G L  D+N   C   +    G E  VY    P     +G Y+V   H   C++  T+W+L + + G V   V  S    + G      A FN
Sbjct:   25 CGSFCKFRLCNFDGDRTTLPKASFTILGAPSTAQLPFICRPGQKVGEVL-------KTGEAQVFDSGRYVPISEWSPRGLRRNFISTYIRPFKVPALPHSGLGRLSSSVN--QHSFLHDQCMIIPVNRY--EIINYATGRPTRILNASG-----RTECVAFRTTAPTIEVKLTWDSQDDFDLEVEEPDGDVLSFRNTRTEYGKLNGDNNAGRCDSDSDLFFGRENVVY---FPNPNIETGRYKVRVIHYNKCSRRPTNWKLMVVINGAV--KVKQSKFSAVEGPETVGTAAFN 296          
The following BLAST results are available for this feature:
BLAST of Gchil533.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IPQ5_9FLOR1.010e-9557.66Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q9Z3_CHOCR1.720e-1733.15Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q9I4_CHOCR8.920e-1528.52Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q2Y4_CHOCR4.310e-927.30Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..301

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000060_piloncontigtig00000060_pilon:728342..729247 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil533.t1Gchil533.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000060_pilon 728342..729247 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil533.t1 ID=Gchil533.t1|Name=Gchil533.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=302bp
MSQSASNRSFHSVLRLAAAALCIALSSACERSCALRFCGGPAVAFIGAPD
APATPAVCGPVGHGVMRRRALRRVGHTQLRLRGYKRLKRADKLGLNATLF
KPVLAPLRFGGSALALSTPLNDRQRQRLHGACAVVRVLEWGDELASRSSA
RRRRHRRRRWHRRGRRADCVAFRVRVAELRVDLEWDSRDDLDLFVTQPDN
KEVFFQSTSNSGHLLRDDNRRACGRATPGGVETAVYARALPTSGAYRVFA
EHSRSCAQGATHWRLRIALRGRVISDVSGSSQLPLGGVIHTSVARFNVSS
V*
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