Gchil5323.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil5323.t1
Unique Name	Gchil5323.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	227

Homology

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BLAST of Gchil5323.t1 vs. uniprot
Match: A0A2V3IW75_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW75_9FLOR)

HSP 1 Score: 155 bits (391), Expect = 4.010e-43
Identity = 83/141 (58.87%), Postives = 106/141 (75.18%), Query Frame = 0

Query:   65 VSNYLNYAMFALLPILAVGPQPTLAEQDVASATATDPLSWIKSLQGNPTLDRILGTTVIVLLVYVTIGAIIITIDGIIIRRNDKREREWVRKRVEGEPYPKTIWSPEIDTEFPPKSTSGASSTAGLNREQRRIEKKIQTKE 205
            + + L+YA++AL+P+L  G  PTLAE D    +  DP   +++  G+ TL R+LG   +VLLVYV++GAII+TID I+IRRND RE +WVRKRV+G PYP T WSPEIDTEFP  S SG+S T GLNREQRRIEKK++ KE
Sbjct:  101 IRHRLSYAVYALVPLLLTGALPTLAEDD----STIDPAEVVQNTSGDSTLGRVLGIITLVLLVYVSVGAIILTIDNILIRRNDARESDWVRKRVKGLPYPPTQWSPEIDTEFP--SRSGSSKTTGLNREQRRIEKKMKEKE 235

The following BLAST results are available for this feature:

BLAST of Gchil5323.t1 vs. uniprot

BLAST of Gchil5323.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IW75_9FLOR	4.010e-43	58.87	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 187..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..226
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..226
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 117..142
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..63
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 84..116
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 64..83
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 143..226
None	No IPR available	TMHMM	TMhelix		coord: 64..83
None	No IPR available	TMHMM	TMhelix		coord: 121..143

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004418_pilon	contig	tig00004418_pilon:1045858..1046538 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil5323.t1	Gchil5323.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004418_pilon 1045858..1046538 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil5323.t1 ID=Gchil5323.t1|Name=Gchil5323.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=227bp
MPKRLHSFRSARMVLSPGGPRQTALISTSNPATPDIHDQVFSSPLCGTTN
ETSRADHISHPLHVVSNYLNYAMFALLPILAVGPQPTLAEQDVASATATD
PLSWIKSLQGNPTLDRILGTTVIVLLVYVTIGAIIITIDGIIIRRNDKRE
REWVRKRVEGEPYPKTIWSPEIDTEFPPKSTSGASSTAGLNREQRRIEKK
IQTKEEKEKKRREARGASKKKDNGDK*