Gchil5315.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5315.t1
Unique NameGchil5315.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length563
Homology
BLAST of Gchil5315.t1 vs. uniprot
Match: A0A2V3IXG8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXG8_9FLOR)

HSP 1 Score: 549 bits (1414), Expect = 3.700e-188
Identity = 308/572 (53.85%), Postives = 371/572 (64.86%), Query Frame = 0
Query:   32 RYKGVGRFRLLQLFSVKNLTLLLIVFAFMLIWSKQTGFAPSLDFATTQILTPTQHVFNI-----SDTLLSNHQEASSSNGGVESEQS-SIQDTKVDSKVPPIAEQ-------------TDAKLSSFPLIET------SKNESNAQPSKF--------GEKEITENSISGEDTKGREEDMKVDGG----------DISEGNEVIGAQLDAPQKPEERSNAQQDPEKDFSLEVRKEELPIADRIAAREAPAPVKTPKPLAEVLNFTPATAINFMHFHKTGGVSFKTSLHKFYYDKFKGNGEKVQVQDACYSREGVQKDSSTPSFLVWRCDWDPIREKNEEERNKIDFTFGHQFWGNGVGDLLNHRDVRSFTIMRHPFDRKVSFYFHFFVREVGRKEEDVTYEEIRDFLLYDKLVIKADLGRDLGPNYMAGRLLSDGIRGYVGNNSFRYYDVEQDKKYDVSEEALDLIRGYVFVGLQAESGAAKCMLKKVVELFNQVNGVDNIGLELIDDGAKKLNSGSYSLDAGRIWSRFSAEEKITFDRKERVDLLIYEEGERLFQEHVQLFGCGHRVVGARY 560
            R KG+ R RL  LFS++N+     VF   L+WS+Q G   S D + TQ+ T       +     SDT  + H++  +     +SEQ+ S+Q    +S    + E+             TD +      +        S  E N    K+           ++   S   ED    +++     G          D+S     + +  +   K           E D S   +   +  A  IA+     P KT   LAEVLNFTPATAINFMHFHKTGGVSFKTSLHKFYY+K+K NGEKV+V+DACYSR+    D STPSF++WRCDWDPIRE +E ERNK+DFTFGHQFWGNGVG LLN RDVRSFTIMRHPFDRKVSF++HFFVREVGR+EED+T+EEIRDFLLYDKL I ADLGRDLGPNYMAGRLLSDG++GYVGNNSFRYYDVE  +K +V+EEAL L+R YVFVGLQ ESGAAKCMLKKVVE +N VN VDN  LELIDDGA+KLNSGSYSL A RIW  FS EE+  FDRKE+VDLLIYEEGERLF++HV+LFGC  R+V  +Y
Sbjct:    2 RQKGLARLRLSPLFSIRNIVFTFAVFMSALLWSRQYGLVSSFDISATQMTTNFAQASKLPSVDSSDTANAQHEQTHA-----QSEQNTSLQKDATESGSKTVLEEQSGSDGNSDHANKTDERHEHAESVRDEQGSYQSHEEHNINSQKYTAAAANTADRAKVQAESNESEDVSHLKKENNQQHGTSQVYTARIDDVSGTKAKLLSSEEKADKSVPHEEGSAGSESDVSESRKGTNVAPAAAIASPPLQEPEKT---LAEVLNFTPATAINFMHFHKTGGVSFKTSLHKFYYEKYKKNGEKVRVRDACYSRKNSNADPSTPSFMMWRCDWDPIREMSESERNKLDFTFGHQFWGNGVGTLLNKRDVRSFTIMRHPFDRKVSFFYHFFVREVGRREEDITFEEIRDFLLYDKLAINADLGRDLGPNYMAGRLLSDGVQGYVGNNSFRYYDVEPHRKREVAEEALKLVRDYVFVGLQVESGAAKCMLKKVVEQYNNVNDVDNSNLELIDDGAEKLNSGSYSLGAKRIWGMFSDEERTLFDRKEKVDLLIYEEGERLFKKHVKLFGCSDRIVAEKY 565          
BLAST of Gchil5315.t1 vs. uniprot
Match: R7QI20_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI20_CHOCR)

HSP 1 Score: 419 bits (1076), Expect = 4.000e-137
Identity = 201/317 (63.41%), Postives = 244/317 (76.97%), Query Frame = 0
Query:  243 KPLAEVLNFTPATAINFMHFHKTGGVSFKTSLHKFYYDKFKGNGEKVQVQDACYSREGVQKDSSTPSFLVWRCDWDPIREKNEEERNKIDFTFGHQFWGNGVGDLLNHRDVRSFTIMRHPFDRKVSFYFHFFVREVGRKEEDVTYEEIRDFLLYDKLVIKADLGRDLGPNYMAGRLLSDGIRGYVGNNSFRYYDVEQDKKYDVSEEALDLIRGYVFVGLQAESGAAKCMLKKVVELFNQVNGVDNIGLELIDDGAKKLNSGSYSLDAGRIWSRFSAEEKITFDRKERVDLLIYEEGERLFQEHVQLFGCGHRVVGAR 559
            K L EVL+FTP TAINFMHFHKTGGVSFKTSLH FY  KFK +G +V  +D+CY RE         SF VWRCDWDPI + N +ERN+ DF FGHQF  +GV +LLN RD+R+FT+MRHPFDRKVSFY+HFFVREVGRKE +V++EE+R+FLL+DKL I A+LGRDLGPNYMAGRLLSDG  G+ GN+   YY VE  +   V E+A+ +I  YVFVGLQ ES A++CML+K +E++N+VNGV N+GLE ID    +LNSGSYS+ A  IW RFS E++I FD KE+VDL IY EG RLF++HVQ+FGC  RV   R
Sbjct:  255 KSLEEVLHFTPKTAINFMHFHKTGGVSFKTSLHVFYNRKFKSDGSQVVARDSCYKRESTL-GGGEQSFAVWRCDWDPILQLNNQERNRHDFVFGHQFGLHGVDELLNLRDLRTFTVMRHPFDRKVSFYYHFFVREVGRKESEVSFEEVREFLLFDKLRIDAELGRDLGPNYMAGRLLSDGKEGFTGNSYHSYYGVEGRQVEGVVEKAVKIIGKYVFVGLQEESAASRCMLRKTMEVYNKVNGVSNVGLEAIDGRNGRLNSGSYSMSAQAIWGRFSMEDRIVFDMKEKVDLAIYREGSRLFRKHVQVFGCADRVKSGR 570          
BLAST of Gchil5315.t1 vs. uniprot
Match: A0A2V3IWK6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWK6_9FLOR)

HSP 1 Score: 251 bits (641), Expect = 1.870e-72
Identity = 135/331 (40.79%), Postives = 200/331 (60.42%), Query Frame = 0
Query:  232 AREAPAPVKTPKPLAEVLNFTPATAINFMHFHKTGGVSFKTSLHKFYY--DKFKGNGEKVQVQDACYSREGVQKDSSTPSFLV---WRCDWDPIREKNEEERNKIDFTFGHQFWGNGVGDLLNHRDVRSFTIMRHPFDRKVSFYFHFFVREVGRKEEDVTYEEIRDFLLYDKLVIKADLGRDLGPNYMAGRLLSDGIRGYVGNNSFRYYDVEQDKKYDVSEEALD-LIRGYVFVGLQAESGAAKCMLKKVVELFNQVNGVDNI-GLELIDDGAKKLNSGSYSLDAGRIWSRFSAEEKITFDRKERVDLLIYEEGERLFQEHVQLFGCGHRV 555
            A  A  P    +   +  NF   TA+N+ H HKTGGVSFK  L  F+   +K    G++V V D C+           P+  +   W CDW  + + +E ER++ID   GHQ+W  G    + +RD+R FT+MRHP  RK+SF++HFFVR  G+KEE V +EE+  F++  K + ++ L RD GPNY A RL SDG  G+  N+ FR   V+++K  D+  ++++ L R +VF+GLQ +  A+ CML+K V  F++ +G++ + GLELID   +++NSGSYS     +W + S +E+  F R E+VDL IY+E  ++F E V+ FGC H V
Sbjct:  244 AXAATTPQPNQRDPTDFSNFDSNTALNYFHLHKTGGVSFKERLFDFFNLENKVTSLGKRVNVLDTCH-----MSGPDRPALGIEAQWSCDWGSMEQLSEAERDQIDVILGHQYWEKGAEYWVPNRDLRYFTVMRHPLHRKISFFYHFFVRNAGKKEESVQFEELIRFIV-GKDMPESTLIRDAGPNYYASRLCSDGFSGFE-NHMFR---VDEEKSNDMVRKSIERLRRKFVFIGLQTQEKASLCMLRKSVAAFSEAHGIEELDGLELIDKARERMNSGSYSYTGKIVWEKMSEQERNEFKRVEKVDLAIYQESVKMFDEMVRKFGCRHLV 564          
BLAST of Gchil5315.t1 vs. uniprot
Match: R7Q8D2_CHOCR (Sulfotransferase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8D2_CHOCR)

HSP 1 Score: 77.4 bits (189), Expect = 1.060e-11
Identity = 67/228 (29.39%), Postives = 100/228 (43.86%), Query Frame = 0
Query:  259 FMHFHKTGGVSFKTSLHKFYYDKFKGNGEKVQVQDACYSREGVQKDSSTPSFLVWR---------CDWDPIREKNEEERNKIDFTFGHQFWGNGVGDLLNHRDVRSFTIMRHPFDRKVSFYFHFFVREVGRKEED-VTYEEIRDFLLYDKLVIKADLGRDLGPNYMAGRLLSDGIRGYVGNNSFRYYDVEQDKKYDVSEEALDLIRGYVFVGLQAESGAAKCMLKKVV 476
            F+H HKTGG S KTSL  F     K NG  + +   C++  G   D    ++   R         C+ D +      +R +ID   GHQF G     L   RDVR FT +RHP  RKVS + HF   + G++       E  R+++            + L  +  AG L +D    +V  +SF      +  K++       LI  + FVGLQ     + C+L +++
Sbjct:   70 FLHLHKTGGNSLKTSLFSF----AKRNG--LGLHHTCHATSG---DGLLSAWWFHRTKRMGKGLDCNLDVLAALPSHKRAEIDLVMGHQFVG--AHSLFPDRDVRYFTFVRHPLARKVSHFIHFERGKPGKRSMTRYLVERNRNYMT-----------KRLATDVRAGELATDLRARFVDLDSFAARAALRAAKHN-------LIDRFFFVGLQERYAESVCVLARIL 268          
The following BLAST results are available for this feature:
BLAST of Gchil5315.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IXG8_9FLOR3.700e-18853.85Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QI20_CHOCR4.000e-13763.41Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IWK6_9FLOR1.870e-7240.79Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q8D2_CHOCR1.060e-1129.39Sulfotransferase n=1 Tax=Chondrus crispus TaxID=27... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 254..549
e-value: 7.2E-13
score: 50.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..160
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..214
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..63
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 64..562
NoneNo IPR availableTMHMMTMhelixcoord: 41..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:1030602..1032290 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5315.t1Gchil5315.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 1030602..1032290 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5315.t1 ID=Gchil5315.t1|Name=Gchil5315.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=563bp
MRSQASQILNLQSTSRPKGRVAPFFRLRSMQRYKGVGRFRLLQLFSVKNL
TLLLIVFAFMLIWSKQTGFAPSLDFATTQILTPTQHVFNISDTLLSNHQE
ASSSNGGVESEQSSIQDTKVDSKVPPIAEQTDAKLSSFPLIETSKNESNA
QPSKFGEKEITENSISGEDTKGREEDMKVDGGDISEGNEVIGAQLDAPQK
PEERSNAQQDPEKDFSLEVRKEELPIADRIAAREAPAPVKTPKPLAEVLN
FTPATAINFMHFHKTGGVSFKTSLHKFYYDKFKGNGEKVQVQDACYSREG
VQKDSSTPSFLVWRCDWDPIREKNEEERNKIDFTFGHQFWGNGVGDLLNH
RDVRSFTIMRHPFDRKVSFYFHFFVREVGRKEEDVTYEEIRDFLLYDKLV
IKADLGRDLGPNYMAGRLLSDGIRGYVGNNSFRYYDVEQDKKYDVSEEAL
DLIRGYVFVGLQAESGAAKCMLKKVVELFNQVNGVDNIGLELIDDGAKKL
NSGSYSLDAGRIWSRFSAEEKITFDRKERVDLLIYEEGERLFQEHVQLFG
CGHRVVGARYQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase