Gchil5307.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5307.t1
Unique NameGchil5307.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length466
Homology
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BLAST of Gchil5307.t1 vs. uniprot
Match: A0A2V3II21_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II21_9FLOR)

HSP 1 Score: 311 bits (798), Expect = 2.730e-98
Identity = 180/435 (41.38%), Postives = 259/435 (59.54%), Query Frame = 0 
Query:   46 GKTVLVKPVRYPLWNEGLFQRQASHAALFLIRLVCLSIPVYLETRFISESNRLLVSKVLPSAYIPEPKDLDVTPS-QISNDIFNSHMFPTELFYRCTFINDDGWLVARTVNVTDSRPDRRNVQCVKDSEQIIYRNLERLQPYQQFS------DGGSISLETPIVKLEVRRDEGLFKAFPPWPGIKSK-PHREFVQVKNVTVLSAIGLECSFWRSPLELN--FDASESHAKH--NSFVCQNVTMNVVDYFFVSTADMLQKSNANVWKRSSNGGMVTKSYTVSVDLQFIGSLEFKDRILVSAATFIRQAWT--PDSTHGFPSALRTMLYTRTNNYTVNVPGNKIKESVRLDNVVLIVGSAEVVSILALWVISSVYQEMKRKSMQKINTVDGLSRCWWRNRAE---DVGSTGTGAPISLRLKHLLRGGVKRTLYVPVD 463
            GK++ V+ + YPLWNEGLF RQ SH  LFLIR+ C+ IPVYLETRFIS SN + V K++ +AY+ +P   DV P      D  N  + P E+F+RC   +DDGW++A+  NVT    DR  + CVK +EQ +YR +E+   + + S            +  P + LEV RDEG FK F PWP ++   P+R+++QVKNVTVL     +C FWR+P+     FD  +   ++  +SFVCQNVT N VD++F S  D+  +SN  + ++  N  +V+K   VS   +FIGSLE+K+ I+++A    R  +   P +   F   +R +LY+R +N TV VPG++   SV LD VV++VG+ EV+ +L L +  +V    K   MQ+ NTV+GLS  W   ++    D+ S   G PISLRLK  +  G +R +Y  V 
Sbjct:    2 GKSIRVRSIPYPLWNEGLFHRQPSHLLLFLIRIACIVIPVYLETRFISHSNPIPVKKLIRNAYVSQPNYHDVHPLWSEQRDPRNVVLLPEEVFHRCAARDDDGWVIAKIANVTLVGKDRDLIHCVKGTEQAVYRTVEKTPHFVESSVVVNDQSKEKTFVYQPNLTLEVWRDEGPFKRFSPWPSVEDDDPNRQYLQVKNVTVLDTKDFQCFFWRAPVAEGHAFDREDRIYEYVLDSFVCQNVTGNFVDFYFTSVQDLANESNTRILEQGGN--LVSKQSIVSTTFEFIGSLEYKNEIIINAGHLSRHQFRFPPTTRFQFLLMIRAILYSRASNVTVEVPGDEKTRSVELDVVVIVVGAMEVIVVLVLGLTLAVISRYKWDDMQRANTVEGLSHIWAMTQSRTWWDLSSKKNG-PISLRLKRYICDGKERFMYDAVQ 433
The following BLAST results are available for this feature:
BLAST of Gchil5307.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3II21_9FLOR2.730e-9841.38Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 88..381
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..87
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 29..67
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 405..465
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 382..404
NoneNo IPR availableTMHMMTMhelixcoord: 382..404
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:895233..896630 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5307.t1Gchil5307.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 895233..896630 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5307.t1 ID=Gchil5307.t1|Name=Gchil5307.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=466bp
MFTLPFGTGVVTAFIFAFLELFLIPILMHATSTLASIFVVKHVAKGKTVL
VKPVRYPLWNEGLFQRQASHAALFLIRLVCLSIPVYLETRFISESNRLLV
SKVLPSAYIPEPKDLDVTPSQISNDIFNSHMFPTELFYRCTFINDDGWLV
ARTVNVTDSRPDRRNVQCVKDSEQIIYRNLERLQPYQQFSDGGSISLETP
IVKLEVRRDEGLFKAFPPWPGIKSKPHREFVQVKNVTVLSAIGLECSFWR
SPLELNFDASESHAKHNSFVCQNVTMNVVDYFFVSTADMLQKSNANVWKR
SSNGGMVTKSYTVSVDLQFIGSLEFKDRILVSAATFIRQAWTPDSTHGFP
SALRTMLYTRTNNYTVNVPGNKIKESVRLDNVVLIVGSAEVVSILALWVI
SSVYQEMKRKSMQKINTVDGLSRCWWRNRAEDVGSTGTGAPISLRLKHLL
RGGVKRTLYVPVDLV*
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