Gchil5291.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5291.t1
Unique NameGchil5291.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length122
Homology
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BLAST of Gchil5291.t1 vs. uniprot
Match: A0A2V3IW88_9FLOR (Ubiquitinyl hydrolase 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW88_9FLOR)

HSP 1 Score: 90.1 bits (222), Expect = 1.080e-18
Identity = 53/110 (48.18%), Postives = 70/110 (63.64%), Query Frame = 0 
Query:    1 MERISTFREHQTPFLLFAVTSDVRAPSAPPKERTKKRKYMNQSMMYSEGRDSYI--------ESDDEAEEELTAEELKRIRAVHNYDSFFVEMMKLMGSRGDILHIVQHE 102
            MER++TFREHQTPFLLFAV+S V         R K     ++S++Y   +   I        ++DDE +E+L+ EEL R  A HNYD+FFVEMMKLM SRGDI  I++ +
Sbjct:  318 MERVATFREHQTPFLLFAVSSSVYQTM----RRRKNHDPHSRSLIYKGQKKPSIPLRHFTDYDTDDELQEQLSQEELTRTLAAHNYDTFFVEMMKLMASRGDIYKIIRRD 423
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BLAST of Gchil5291.t1 vs. uniprot
Match: R7QGL6_CHOCR (Ubiquitinyl hydrolase 1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGL6_CHOCR)

HSP 1 Score: 62.8 bits (151), Expect = 3.580e-9
Identity = 41/126 (32.54%), Postives = 59/126 (46.83%), Query Frame = 0 
Query:    3 RISTFREHQTPFLLFAVTSDVRAPSAPPKERTKKRKY---------MNQSMMYSEGRDSYI--------------ESDDEAEEELTAEELKRIRAVHNYDSFFVEMMKLMGSRGDILHIVQHEENY 105
            + +TF+EH TPFL FAV  D    S       +K  +         + Q     E   S +              E  DE + E   EE++RIRA HNYD+FF E +KL+ SRGD+  +++ +  Y
Sbjct:  164 KATTFQEHNTPFLFFAVVEDTPENSTVRAANKRKSTWSDGDSSSPELQQQSSEEEKEGSDVAPAESAADRDSDKPEGGDEVDGETIREEVQRIRATHNYDAFFTEFLKLLASRGDLNAMIRAQSEY 289
The following BLAST results are available for this feature:
BLAST of Gchil5291.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IW88_9FLOR1.080e-1848.18Ubiquitinyl hydrolase 1 n=1 Tax=Gracilariopsis cho... [more]
R7QGL6_CHOCR3.580e-932.54Ubiquitinyl hydrolase 1 n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:787638..788003 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5291.t1Gchil5291.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 787638..788003 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5291.t1 ID=Gchil5291.t1|Name=Gchil5291.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=122bp
MERISTFREHQTPFLLFAVTSDVRAPSAPPKERTKKRKYMNQSMMYSEGR
DSYIESDDEAEEELTAEELKRIRAVHNYDSFFVEMMKLMGSRGDILHIVQ
HEENYLSSQATSEEEDDDQLS*
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