Gchil5283.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5283.t1
Unique NameGchil5283.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length156
Homology
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BLAST of Gchil5283.t1 vs. uniprot
Match: A0A2V3IHZ7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHZ7_9FLOR)

HSP 1 Score: 231 bits (590), Expect = 4.840e-76
Identity = 101/132 (76.52%), Postives = 124/132 (93.94%), Query Frame = 0 
Query:   24 KEAQLEFKVVPNKAEKIEIALDTPPIESSTCIFEWDSSGATVEQWIARIWGDPRTGELECEISRKGGAETYLLFSKFKTSLGTNPILEAIVHDNDGEMDTDSFVSDGECVENAHEWSGGTIRRIHLKSMVIS 155
            KE ++EF++VPNK  K+E+ALDTPPIESSTCIFEWDSSGATVEQW ARIWG+PRTGELEC++SRK GAETYL+F+KFKT+LGTNP+L+A+VHDNDGEM+ ++F+ DGEC+ENAH+W+GGTIRRI LKSMV+S
Sbjct:    8 KEVEIEFRIVPNKPGKVEVALDTPPIESSTCIFEWDSSGATVEQWTARIWGNPRTGELECDVSRKEGAETYLMFTKFKTTLGTNPVLDALVHDNDGEMEAENFLRDGECIENAHDWAGGTIRRIKLKSMVVS 139
The following BLAST results are available for this feature:
BLAST of Gchil5283.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IHZ7_9FLOR4.840e-7676.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018887Myeloid-derived growth factorPFAMPF10572UPF0556coord: 49..149
e-value: 2.0E-10
score: 40.8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:643956..644585 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5283.t1Gchil5283.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 643956..644585 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5283.t1 ID=Gchil5283.t1|Name=Gchil5283.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=156bp
MMLPKWSFPFILMFLSSITAVVTKEAQLEFKVVPNKAEKIEIALDTPPIE
SSTCIFEWDSSGATVEQWIARIWGDPRTGELECEISRKGGAETYLLFSKF
KTSLGTNPILEAIVHDNDGEMDTDSFVSDGECVENAHEWSGGTIRRIHLK
SMVIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018887MYDGF