Gchil5278.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5278.t1
Unique NameGchil5278.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length646
Homology
BLAST of Gchil5278.t1 vs. uniprot
Match: A0A2V3IYY0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYY0_9FLOR)

HSP 1 Score: 72.8 bits (177), Expect = 1.090e-9
Identity = 129/477 (27.04%), Postives = 209/477 (43.82%), Query Frame = 0
Query:  175 VNNQSSASAVEIVGRSDATIGQALEQLAILSSIPRRRGRPSKSVIEQRNRLKKLREQLDDDIQRLDATGTAHVSTATSDKTTAIAKTGQKSCKRPSRSMMRTASPRAVESPDRDANRTRKASSSTRTTTITYIDSSSPSSEDEKATRATKRQRPVSIEGKLKTTKLKRLTDIDRDGAMTPISTKKKVRAISPRKRAQKAPKTSLGGQRPNAEKGGKTVSQNDENESDXXXXXXXXXXXXXXXXXXXXXXXXHKEGRSKEGAEEEHTANNIRRTDESEEKGEQCCG----------------REKQDEDAKNKK---IERLQGEVDELKERLQNEMYRAVELEEALGLDVRAEVANRTEVQDMKKHIAELEGQMSSWKWKMEQKEDEVREKDAALRGLLAQVKDLEARKCEMCGRKEGHGADAQVEGKKEWMLGAEEAAEDRQE-EVDELKRYATEVSGRLKRVVQANRRLQQKMLRL 631
            + + +  +A  IVGR +ATI QAL +L++L S+PRRRGRPSKS +EQR+RL +LR +L +++ +L       V   +  +    A++ + + KRP       A+   V   +   +  +    ST     T  DS+S S           +Q    ++G  +T          ++GAM+  +   K      RK+A K       G  P+  K     S + +++ +       XXXXXX            +   S +  +   +  + ++TD+ E+   +  G                REK  E  +++K   IE LQ E+ E++E+LQ E  RA ELEEAL ++V+   +N  + + +K+ +  LE                                  E+R+CE CG     G  +     K W        ED  + +VD LK Y   ++ RLKRV+Q NRR+QQ++  L
Sbjct:  185 IRHMTCIAAEHIVGRPNATIAQALHRLSLLDSVPRRRGRPSKSEVEQRSRLDRLRSELCEEMHQL------RVKHDSLTRVEPPAQSMKAATKRPP-----IANVTGVLGAESTGSTNQAGIQST-----TNNDSNSAS-----------KQACTILKGNGET----------KEGAMSGHAVPCK------RKQAMKT------GSTPDTMKTYNVSSSSGQSDVNETTAGAKXXXXXXTGGGDECGRGVKRNADSTDVEQSGRSCKSPKQTDDEEKMLNRNAGEILEARGGDSDNNNECREKDGETGRDEKQAVIESLQREISEVREQLQRESKRADELEEALNVEVQVHASNTAQEEMLKEKVKALEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESRRCEGCG-----GCRS-----KTWREDDSVGGEDTTQCQVDGLKEYVETLNARLKRVLQRNRRMQQRLYEL 602          
The following BLAST results are available for this feature:
BLAST of Gchil5278.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IYY0_9FLOR1.090e-927.04Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 218..242
NoneNo IPR availableCOILSCoilCoilcoord: 589..609
NoneNo IPR availableCOILSCoilCoilcoord: 521..562
NoneNo IPR availableCOILSCoilCoilcoord: 465..499
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 295..313
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 418..471
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 314..355
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 398..417
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..471
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:498260..500197 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5278.t1Gchil5278.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 498260..500197 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5278.t1 ID=Gchil5278.t1|Name=Gchil5278.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=646bp
MSSPSSHAPLPVLPPPRSVPYPSSNTRKEPVDGRSRVRDGGTSRVRDETP
NFVTLVKRKSSPPRSISSFDSSDSSSEASNPSSSSLSSAQVRVGPSSPSS
SSNYHSSAPSSPSNRARFSSSPSIKPPIQKHIKHSSVEKPRSPISNIRRK
LSEEGNRNKTKLTVHGYPQKVLSKVNNQSSASAVEIVGRSDATIGQALEQ
LAILSSIPRRRGRPSKSVIEQRNRLKKLREQLDDDIQRLDATGTAHVSTA
TSDKTTAIAKTGQKSCKRPSRSMMRTASPRAVESPDRDANRTRKASSSTR
TTTITYIDSSSPSSEDEKATRATKRQRPVSIEGKLKTTKLKRLTDIDRDG
AMTPISTKKKVRAISPRKRAQKAPKTSLGGQRPNAEKGGKTVSQNDENES
DNEDSDEDSDEKSDGSGDENSDETSHKEGRSKEGAEEEHTANNIRRTDES
EEKGEQCCGREKQDEDAKNKKIERLQGEVDELKERLQNEMYRAVELEEAL
GLDVRAEVANRTEVQDMKKHIAELEGQMSSWKWKMEQKEDEVREKDAALR
GLLAQVKDLEARKCEMCGRKEGHGADAQVEGKKEWMLGAEEAAEDRQEEV
DELKRYATEVSGRLKRVVQANRRLQQKMLRLHRLEVGDKEAQELL*
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