Gchil5274.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5274.t1
Unique NameGchil5274.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length162
Homology
BLAST of Gchil5274.t1 vs. uniprot
Match: A0A2V3J0A2_9FLOR (Endoplasmic reticulum transmembrane protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0A2_9FLOR)

HSP 1 Score: 241 bits (615), Expect = 1.990e-79
Identity = 123/161 (76.40%), Postives = 141/161 (87.58%), Query Frame = 0
Query:    1 MSLLWRSVSVVLVVELIILLTLCAPLPWGVRKNISRWIFRVKAQEKLNSFVKYITFALFLALAESLNGLRIALERTQKQKEAQFHQDPGYVTPATDYRWQKVRAERNLYLASFAIVALVAIARLVRLASIEVQLRDMIKSYNGNKPISETGESLGEQDKND 161
            MSL+WRSVSVVL++E+I+LL LCAPLPWGVRKNISRWIFRVKA+E+LNS +KYITFALF+ALAESLN LRI  ERT++Q E    QDP Y+TPATDYRW+KVRAERN YLASF+I+ LVAI RLVRLA+IEVQLR  IKSYNGNKPISETGE+L  + K D
Sbjct:    1 MSLMWRSVSVVLLIEVIVLLALCAPLPWGVRKNISRWIFRVKARERLNSIIKYITFALFMALAESLNALRIVAERTREQNEGHLTQDPVYITPATDYRWKKVRAERNFYLASFSIITLVAITRLVRLAAIEVQLRQRIKSYNGNKPISETGETLEIRGKTD 161          
BLAST of Gchil5274.t1 vs. uniprot
Match: UPI001E1DC6BA (B-cell receptor-associated protein 31-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DC6BA)

HSP 1 Score: 99.4 bits (246), Expect = 3.540e-23
Identity = 60/146 (41.10%), Postives = 82/146 (56.16%), Query Frame = 0
Query:    2 SLLWRSVSVVLVVELIILLTLCAPLPWGVRKNISRWIFRVKAQEKLNSFVKYITFALFLALAESLNGLR--------IALERTQKQKEAQFHQDPGYVTPATDYRWQKVRAERNLYLASFAIVALVAIARLVRLASIEVQLRDMIK 139
            S LW  V+VVL +EL++L    APLPWGVRKN++R+  R   +      ++Y+ F L LA+ ES++GL+           ER      A    D      A D+RWQ V A+RNLYLA F +V L  ++R++ L S E  LRD IK
Sbjct:    3 SFLWACVTVVLALELLVLSLFVAPLPWGVRKNVTRFFQRPAVEAAFQRVLRYVGFGLALAIVESIHGLQNLHKVIQFSVDERVSLDASANVASDVS----AHDFRWQSVLAQRNLYLAGFCLVLLFTLSRVIELVSHETALRDKIK 144          
BLAST of Gchil5274.t1 vs. uniprot
Match: A0A5J4Z992_PORPP (Endoplasmic reticulum transmembrane protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z992_PORPP)

HSP 1 Score: 73.9 bits (180), Expect = 1.300e-13
Identity = 48/152 (31.58%), Postives = 84/152 (55.26%), Query Frame = 0
Query:    2 SLLWRSVSVVLVVELIILLTLCAPLPWGVRKNISRWIFRVKAQEKLNSFVKYITFALFLALAESLNGLRIALERTQKQKEAQFHQDPGY-VTPATDYRWQKVRAERNLYLASFAIVALVAIARLVRLASIEVQLRDMIK--SYNGNKPISET 150
            S++W +V  +LV EL++++ LC PLPWG+RK + + +   K    + + + ++  AL LA A S+  +    E++   K  +     GY V   +  R +K R+ERN+YL+ F +   + + RL  L + EVQLR  ++  S   + P ++T
Sbjct:    4 SIVWMAVFCLLVFELVLVVLLCLPLPWGMRKFVVKLVGSAKGIHHVQTGIVFLLLALTLAFASSVQEMLFVTEKSNAYK-FELSSASGYEVWEYSKLRQEKFRSERNMYLSLFCLTLSLVLRRLFELFANEVQLRSQLEGASKGTDAPAAQT 154          
The following BLAST results are available for this feature:
BLAST of Gchil5274.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J0A2_9FLOR1.990e-7976.40Endoplasmic reticulum transmembrane protein n=1 Ta... [more]
UPI001E1DC6BA3.540e-2341.10B-cell receptor-associated protein 31-like n=1 Tax... [more]
A0A5J4Z992_PORPP1.300e-1331.58Endoplasmic reticulum transmembrane protein n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040463BAP29/BAP31, transmembrane domainPFAMPF05529Bap31coord: 1..139
e-value: 2.6E-19
score: 69.5
IPR008417B-cell receptor-associated protein 29/31PANTHERPTHR12701BCR-ASSOCIATED PROTEIN, BAPcoord: 1..134
NoneNo IPR availablePANTHERPTHR12701:SF50LP10861Pcoord: 1..134
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 108..125
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 74..107
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 126..161
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..73
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..49
NoneNo IPR availableTMHMMTMhelixcoord: 108..130
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 49..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:490861..491346 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5274.t1Gchil5274.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 490861..491346 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5274.t1 ID=Gchil5274.t1|Name=Gchil5274.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=162bp
MSLLWRSVSVVLVVELIILLTLCAPLPWGVRKNISRWIFRVKAQEKLNSF
VKYITFALFLALAESLNGLRIALERTQKQKEAQFHQDPGYVTPATDYRWQ
KVRAERNLYLASFAIVALVAIARLVRLASIEVQLRDMIKSYNGNKPISET
GESLGEQDKND*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040463BAP29/BAP31_N
IPR008417BAP29/BAP31