Gchil5259.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5259.t1
Unique NameGchil5259.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length346
Homology
BLAST of Gchil5259.t1 vs. uniprot
Match: A0A2V3J1S7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1S7_9FLOR)

HSP 1 Score: 446 bits (1146), Expect = 2.450e-154
Identity = 227/346 (65.61%), Postives = 270/346 (78.03%), Query Frame = 0
Query:    1 MGVYTAFARRGSEEYSTRTSTFPARCRRKHVSARSIHNRYPNLFFLLSIVGILSSAYWVLRLLGCFVVWV-SDKSKERQLTAEKTIANGAPRPIFVIAGGGARTGSTLIFNVLRVLLRIRDPNTVASSNWMLAKLIPENNTMIEYDRIALLKTMGTSILVKVHTAKQYYDFTGPAHNKSFAEEVDLLVTGYRDLREETVSAFKMFAKNRSEWEHESKWAEQCQVLIRRRNTLILEAGSAVPVVDIRYESWGDGTPSSMMWLIRKLGSSLPWNYSELDYRSTLHEVSRLRVPLGGEPDTRVDWHVSNLMSPKHISTEYLSQEFLERGKRAVSAEPKCATWLTKKGYM 345
            MG   A  ++GS E S   S    R RR+H   R I + Y N  FL S++GI++  +++LR L   +  + S  SK    T++       PRPI VIAGGGARTGST IFN+LRVL+RIRDPNTVASSNWMLAKL+PENNT+  YDRIALLK+MGTSIL+KVHTAKQYYDF GPAH  +FA+EVDLLVTGYRDLR+ETVSA+KMFAKNRSEWE ESKWAEQCQ LIRRRN+LILEAGS VPVVDIRYESW DG  +  + LIR+LGS +PW+Y+E DY+STL+EV RLRVP GG+P  R+DWH+SNLMSP+HISTE LS EF++ G RA+  EPKCA WLT+KGY+
Sbjct:    1 MGGGLAGNQKGSLEPSKHAS-LSVRSRRRHFPVRKIVSHYSNAVFLFSLIGIIAFVWFILRALSQTLHNIPSTHSKWSFSTSKGNEMEAVPRPILVIAGGGARTGSTFIFNILRVLMRIRDPNTVASSNWMLAKLVPENNTLTNYDRIALLKSMGTSILIKVHTAKQYYDFAGPAHRNTFAKEVDLLVTGYRDLRDETVSAYKMFAKNRSEWESESKWAEQCQALIRRRNSLILEAGSNVPVVDIRYESWRDGGSACFLQLIRQLGSRIPWSYTEQDYKSTLNEVLRLRVPSGGDPSGRIDWHISNLMSPRHISTEQLSTEFVDMGIRAIIREPKCAAWLTEKGYL 345          
BLAST of Gchil5259.t1 vs. uniprot
Match: A0A7S2ZYK3_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZYK3_9RHOD)

HSP 1 Score: 65.5 bits (158), Expect = 2.870e-8
Identity = 70/305 (22.95%), Postives = 127/305 (41.64%), Query Frame = 0
Query:   70 VSDKSKERQLTAEKTIANGAPRPIFVIAGGGARTGSTLIFNVLRVLLRIRDPNTVASSNWMLAKLIPENNTMIEYDRIALLKTMGTSILVKVHTAKQYYDFTGPAHNKSFAEEVDLLVTGYRDLREETVSAFKM------FAKNRSEWEHESKWAEQCQVL----IRRRNTLILEAGSAVPVVDIRYESWG--DGT--------------PSSMMWLIRKLGSSLPW----NYSELDYRSTLHEVSRLRVPLGGEPDTRVDWHVSNLMSPKHISTEYLSQEFLERGKRAVSAEPKCATWLTKKGY 344
            V D    ++ + E        +   V+  G  RTGST+++N++R  L   +PNT++     L       +T         L++MG  ++VK+H     Y   GP         +D ++   RDLR + +S  +M      + +N  + +      +  Q+L    +    T +L+A + +  +D + + W   DG               P    WL ++L   LP     + SEL+  +T  +  +   PL  +  + V  + S  M   HI      +++   G  A+ A+P C+ WL++ GY
Sbjct:   44 VYDSGFPKEFSCEDDGDTNNEKTPLVLVMGLPRTGSTIVYNMIRKALEADNPNTLSGYVGDLVSTARAFSTDDSASAALALRSMGVPLVVKLHLMPHIYQLFGPVQQAPAELGIDKIICTCRDLRMQVLSNIRMGWSSMVYEENLLQEDFCLGELKSTQLLSPSDLEDPRTWVLQARAQIRCLD-KIKDWAGRDGIQWIRTEDIPRKFADPQGRAWLKQEL-EPLPGTRQRSESELEVLATFLDGIK---PL--QCSSTVAVNPSTHMHRGHIRKSEALKDYERAGIEAIEADPDCSAWLSEHGY 341          
BLAST of Gchil5259.t1 vs. uniprot
Match: A0A1X6NVY7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NVY7_PORUM)

HSP 1 Score: 64.7 bits (156), Expect = 6.860e-8
Identity = 42/134 (31.34%), Postives = 69/134 (51.49%), Query Frame = 0
Query:   91 RPIFVIAGGGARTGSTLIFNVLRVLLRIRDPNTVASSNWM---------LAKLIPENNTMIEYD---RIALLKTMGTSILVKVHTAKQYYDFTGPAHNKS-----------------FAEEVDLLVTGYRDLRE 195
            RP+ V+A GG+R+ ST ++NV R+LLR+RDPNTVA   W           A+L   N T    +   R+  L+++ TS+L+K+H  +++    G A   +                  +   D+++T +RD+RE
Sbjct:   84 RPLLVVAAGGSRSASTWVYNVARILLRVRDPNTVAG--WYEDLAGLTGAYAQLEAGNGTYPHVEVASRLDALRSLDTSVLLKIHLVQEWATLLGGADAATTTATGGASDADLVPLTELSAAADVVLTSHRDVRE 215          
The following BLAST results are available for this feature:
BLAST of Gchil5259.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J1S7_9FLOR2.450e-15465.61Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S2ZYK3_9RHOD2.870e-822.95Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A1X6NVY7_PORUM6.860e-831.34Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 43..70
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..42
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 71..345
NoneNo IPR availableTMHMMTMhelixcoord: 43..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:395920..396957 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5259.t1Gchil5259.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 395920..396957 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5259.t1 ID=Gchil5259.t1|Name=Gchil5259.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=346bp
MGVYTAFARRGSEEYSTRTSTFPARCRRKHVSARSIHNRYPNLFFLLSIV
GILSSAYWVLRLLGCFVVWVSDKSKERQLTAEKTIANGAPRPIFVIAGGG
ARTGSTLIFNVLRVLLRIRDPNTVASSNWMLAKLIPENNTMIEYDRIALL
KTMGTSILVKVHTAKQYYDFTGPAHNKSFAEEVDLLVTGYRDLREETVSA
FKMFAKNRSEWEHESKWAEQCQVLIRRRNTLILEAGSAVPVVDIRYESWG
DGTPSSMMWLIRKLGSSLPWNYSELDYRSTLHEVSRLRVPLGGEPDTRVD
WHVSNLMSPKHISTEYLSQEFLERGKRAVSAEPKCATWLTKKGYM*
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