Gchil524.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil524.t1
Unique NameGchil524.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length124
Homology
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BLAST of Gchil524.t1 vs. uniprot
Match: A0A2V3ISH0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISH0_9FLOR)

HSP 1 Score: 97.1 bits (240), Expect = 1.250e-23
Identity = 50/107 (46.73%), Postives = 74/107 (69.16%), Query Frame = 0 
Query:   11 HESEQGPAIEPAPPANKLSTQNA-----PTPEEILNLECHVSQLRSDVSNLQHQLLCLRQLNKTLGDSALTMPEDLGEWEDANPRISGLVNRIRQTYHLSEQVQSLR 112
            H S+Q  ++E APP +     +A     PT  +I ++  ++S+LR+++  L HQ++CL  L  +LGD AL MPEDLG+W  ANPR+SGLVNRI QTY L++QV++L+
Sbjct:    5 HPSDQK-SVEQAPPQSSSVRTHAADSFIPTHHQITDMYINLSELRNELDRLNHQVVCLETLTHSLGDKALAMPEDLGDWSQANPRLSGLVNRILQTYQLAQQVRALK 110
The following BLAST results are available for this feature:
BLAST of Gchil524.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ISH0_9FLOR1.250e-2346.73Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 39..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000060_piloncontigtig00000060_pilon:700070..700441 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil524.t1Gchil524.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000060_pilon 700070..700441 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil524.t1 ID=Gchil524.t1|Name=Gchil524.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=124bp
MSSRDPPSIEHESEQGPAIEPAPPANKLSTQNAPTPEEILNLECHVSQLR
SDVSNLQHQLLCLRQLNKTLGDSALTMPEDLGEWEDANPRISGLVNRIRQ
TYHLSEQVQSLRKQKRAVGWKGS*
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