Gchil5233.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5233.t1
Unique NameGchil5233.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length300
Homology
BLAST of Gchil5233.t1 vs. uniprot
Match: R7QF31_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF31_CHOCR)

HSP 1 Score: 417 bits (1073), Expect = 1.860e-145
Identity = 205/236 (86.86%), Postives = 224/236 (94.92%), Query Frame = 0
Query:   61 PALAAAKFSKKTVSEKLSQVPVFAVTNASGQPYLAKMDGSGSQIGLIFFSHHDALNMLKDMKKNPGASDARVYIMGLDKAYEMVKAKPTPSGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMRLSSSVQGVPVFVAKGLTLRKGNENIVPLFLTKEDLDASWEKLRETNKDLPNSAPVVVGNLLYIIQQMENDEQPELKNLGFFAPRASVEYVSKEQAGPTGQARLHQNPVNPQ 296
            PA AAAKFSKKTVSEKLSQVPVFAVTNASGQPYLA MDGSGSQIGLIFFSHHDALNMLKDMKKNPGASDARVYIMGLDKAYEMVKAKP PSGIRG+ GEE+TMVFRF+PDSKQVKAAEGLQRK+R    V+G+PVFVAKGLTLRKG+EN+VPLFLTKEDLD++W KLR++NKDLPN+A VVVGNLLYIIQQME+D +PEL+NLGFFAP+ASVEYV+KEQAGPTGQAR+HQNPV PQ
Sbjct:   15 PAFAAAKFSKKTVSEKLSQVPVFAVTNASGQPYLANMDGSGSQIGLIFFSHHDALNMLKDMKKNPGASDARVYIMGLDKAYEMVKAKPQPSGIRGAAGEELTMVFRFFPDSKQVKAAEGLQRKLRRRRGVEGIPVFVAKGLTLRKGSENVVPLFLTKEDLDSAWSKLRDSNKDLPNNASVVVGNLLYIIQQMESDGEPELRNLGFFAPKASVEYVTKEQAGPTGQARMHQNPVTPQ 250          
BLAST of Gchil5233.t1 vs. uniprot
Match: A0A2V3IZ91_9FLOR (Protein TIC 22, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ91_9FLOR)

HSP 1 Score: 384 bits (987), Expect = 4.130e-133
Identity = 192/203 (94.58%), Postives = 198/203 (97.54%), Query Frame = 0
Query:   97 MDGSGSQIGLIFFSHHDALNMLKDMKKNPGASDARVYIMGLDKAYEMVKAKPTPSGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMRLSSSVQGVPVFVAKGLTLRKGNENIVPLFLTKEDLDASWEKLRETNKDLPNSAPVVVGNLLYIIQQMENDEQPELKNLGFFAPRASVEYVSKEQAGPTGQARLHQNPVNPQQSK 299
            MDGSGSQIGLIFFSH DALNMLKDM+KNPGASDARVYIMGLDKAYEMVKAKPTPSGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMRLSSSVQGVPVFVAKGLTLRKGNENIVPLFLTKEDLDASW KLRE+NK LPNSAPV VGNLLYIIQQME+DEQP+L+NLGFFAPRASVEYVSKEQAGPTGQARLHQNPVNPQ +K
Sbjct:    1 MDGSGSQIGLIFFSHLDALNMLKDMQKNPGASDARVYIMGLDKAYEMVKAKPTPSGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMRLSSSVQGVPVFVAKGLTLRKGNENIVPLFLTKEDLDASWAKLRESNKHLPNSAPVAVGNLLYIIQQMESDEQPQLRNLGFFAPRASVEYVSKEQAGPTGQARLHQNPVNPQNNK 203          
BLAST of Gchil5233.t1 vs. uniprot
Match: A0A7S0MD44_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MD44_9CRYP)

HSP 1 Score: 233 bits (595), Expect = 5.240e-72
Identity = 115/213 (53.99%), Postives = 153/213 (71.83%), Query Frame = 0
Query:   66 AKFSKKTVSEKLSQVPVFAVTNASGQPYLAKMDGSGSQIGLIFFSHHDALNMLKDMKKNPGASDARVYIMGLDKAYEMVKAKPTPSGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMRLSSSVQGVPVFVAKGLTLRKGNENIVPLFLTKEDLDASWEKLRETNKDLPNSAPVVVGNLLYIIQQMENDEQPELKNLGFFAPRASVEYVSKE 278
            AKFS K   +KLSQVPVFAVTN+SGQPYLA  +  G Q+GLIFFSH DAL +L+ M+K    SDAR+YIMGLDKAY+MV +    SGI+G  G+E+ M+FRFYP+ KQ+K A  +   +  S   +GVP+F+A GLT+RKGNE+I+P+FLTKEDLD +W K+   N D+     +++G+L+ II+ MEN++    K  GFF P+ S E+V KE
Sbjct:   89 AKFSNKNFYQKLSQVPVFAVTNSSGQPYLAN-NSKGEQVGLIFFSHEDALGLLRAMQKARQVSDARIYIMGLDKAYKMVLSNAASSGIKGYQGQELKMIFRFYPNQKQIKYANSIVNGINFSEKFKGVPIFIADGLTIRKGNEDIIPIFLTKEDLDEAWLKMSLNNPDINPKPTILIGDLIKIIRTMENNKNDYCK-FGFFPPKESTEFVKKE 299          
BLAST of Gchil5233.t1 vs. uniprot
Match: M1URJ3_CYAM1 (Similar to chloroplast inner membrane protein Tic22 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1URJ3_CYAM1)

HSP 1 Score: 226 bits (577), Expect = 1.030e-68
Identity = 122/250 (48.80%), Postives = 173/250 (69.20%), Query Frame = 0
Query:   61 PALAAAK-----FSKKTVSEKLSQVPVFAVTNASGQPYLAKMDGSGSQIGLIFFSHHDALNMLKDMKKNPG--ASDARVYIMGLDKAYEMVKAKPTPSGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMRLSSSVQGVPVFVAKGLTLRKGNENIVPLFLTKEDLDASWEKLRETNKDLPNSAPVVVGNLLYIIQQMEN----------DEQPELKNLGFFAPRASVEYVSKEQAGP-TGQARLHQNP 292
            PA++AAK     +S+KT+SEKL+QVPVFAVTN SGQP+LA M+  G Q+GLIFF   DA+ ML+D+K++ G  A DAR++IMGLD+A+EMVK+KP PSG+RG  G+E+ MVFRFYP+ +Q++ A  + +K +   +V+GVP FVAKGLTLRKG E ++P+FL K DLD +W +LR+   +LP    + VG+L+ +I ++E            E  +L+ + FF    SVE++ +E A    G AR+H  P
Sbjct:  115 PAVSAAKTPHARYSRKTLSEKLAQVPVFAVTNESGQPFLAAME-RGLQVGLIFFDPDDAIKMLEDLKRSSGKEAEDARIFIMGLDRAFEMVKSKPQPSGLRGPRGDELKMVFRFYPNQQQLEYARTVAKKTK-QPTVRGVPCFVAKGLTLRKGKEFVIPIFLDKRDLDEAWNRLRQELAELPKQPEIEVGDLIEVILRLEEAAKNPKSLNETELQDLRRVAFFPSSKSVEFMKRESAKQFKGTARMHSRP 362          
BLAST of Gchil5233.t1 vs. uniprot
Match: A0A5J4Z7G8_PORPP (Protein TIC 22, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7G8_PORPP)

HSP 1 Score: 225 bits (573), Expect = 2.990e-68
Identity = 118/246 (47.97%), Postives = 165/246 (67.07%), Query Frame = 0
Query:   55 TATLVQPALAAAKFSKKTVSEKLSQVPVFAVTNASGQPYLAKMDGSGSQIGLIFFSHHDALNMLKDMKKNPGASDARVYIMGLDKAYEMVKAKPTPSGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMR-LSSSVQGVPVFVAKGLTLRKGNENIVPLFLTKEDLDASWEKLRETNKDLPNSAPVVVGNLLYIIQQMEN-------DEQPELKNLGFFAPRASVEYVSKEQAGPTGQARLHQNP 292
            TA LV  A A  ++SK +V EKLSQ+ VFAVTNA+GQPYLA  DG  +Q+GLIFFS  DA  M  +M KNP  +DA+++ M LDKA++MV+++P  SGIRG  G+E++MVFRFYPDS+ +KAA    +K+R L  S QGVPVF A+GL++RKG E I P F T EDL+A+W K+R  N  +P+   V + +LL ++  +E        ++  +L  +GF     +++Y+ K Q G +  AR+H NP
Sbjct:  102 TAPLVPAANAVIRYSKMSVKEKLSQIAVFAVTNAAGQPYLANSDGE-NQVGLIFFSIDDAYKMQMEMHKNPSTADAKIFSMSLDKAFDMVRSEPQSSGIRGPNGKELSMVFRFYPDSEAMKAANDPLKKLRSLKKSFQGVPVFSARGLSIRKGGEMIKPFFFTMEDLNAAWNKMRRENGGVPSRPQVDIEDLLVLVSALEKYTGEHAEEQDAQLVTVGFVPSSRTLDYLKKSQTGSSRTARMHANP 346          
BLAST of Gchil5233.t1 vs. uniprot
Match: A0A7J7IP27_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IP27_9RHOD)

HSP 1 Score: 225 bits (573), Expect = 5.140e-68
Identity = 118/240 (49.17%), Postives = 166/240 (69.17%), Query Frame = 0
Query:   66 AKFSKKTVSEKLSQVPVFAVTNASGQPYLAKMDGSGSQIGLIFFSHHDALNMLKDMKKNPG--ASDARVYIMGLDKAYEMVKAKPTPSGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMRLSSSVQGVPVFVAKGLTLRKGNENIVPLFLTKEDLDASWEKLRETNKDLPNSAPVVVGNLLYIIQQMEN----------DEQPELKNLGFFAPRASVEYVSKEQAGP-TGQARLHQNP 292
            A++S+KT+ EKL+QVPVFAVTN SGQP+LA M+  G+Q+GLIFF   DA+ ML+D+K++ G  A DAR+++MGLD+A+EMVK+KP PSG+RG  G+E+ MVFRFYP+ +QV+ A  L RK +    V+GVP FVAKGLTLRKG E ++P+FL K DL+ +W +LR+   DLP    V VG+L+ +I ++E            E  +++ + FF    SVE++ +E      G AR+H  P
Sbjct:  133 ARYSRKTLDEKLAQVPVFAVTNESGQPFLAAME-RGTQVGLIFFDPSDAMKMLEDLKRSSGKEAEDARIFVMGLDRAFEMVKSKPQPSGLRGPRGDELKMVFRFYPNQQQVEHARSLARKTK-QPLVRGVPCFVAKGLTLRKGKEFVIPVFLDKRDLEDAWSRLRQDMSDLPKHPEVEVGDLIEVILRLEEAAKNPKSLDEKELQDIRRVAFFPSSKSVEFMKQESMKQFKGTARMHARP 370          
BLAST of Gchil5233.t1 vs. uniprot
Match: A0A1X6NSW5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NSW5_PORUM)

HSP 1 Score: 221 bits (562), Expect = 4.300e-67
Identity = 121/222 (54.50%), Postives = 142/222 (63.96%), Query Frame = 0
Query:   74 SEKLSQVPVFAVTNASGQPYLAKMDGSGSQIGLIFFSHHDALNMLKDMKKNPGASDARVYIMGLDKAYEMVKAKPTPSGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMRLSSSVQ--GVPVFVAKGLTLRKGNENIVPLFLTKEDLDASWEKLRETNKDLPNSAPVVVGNLLYIIQQMENDEQPELKNLGFFAPRASVEYVSKEQAGPTGQARLHQNPV 293
            S KL+QVPVFAVTNA GQPYLA +DG+G+Q+GLIFFSH +AL+M  DM+K+P  +DARVYIMGLDKAYEMVKAKPTPSGIRG  GEE+ MVFRF PD KQV  A  L R + +    +  GVPVF A GLTLRK  E +VPLFL KED                                ME+   PEL    F AP AS EY+  +Q G +  AR+HQNP+
Sbjct:  121 SAKLAQVPVFAVTNAGGQPYLANVDGAGTQVGLIFFSHEEALSMQADMQKSPTTADARVYIMGLDKAYEMVKAKPTPSGIRGPAGEELRMVFRFSPDRKQVGHAARLLRAVPIGGGGETAGVPVFAAPGLTLRKAGEPVVPLFLAKED--------------------------------MESGVHPELARHAFVAPTASTEYMQSQQGGASKNARMHQNPL 310          
BLAST of Gchil5233.t1 vs. uniprot
Match: A0A7S3A3T2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A3T2_9RHOD)

HSP 1 Score: 212 bits (540), Expect = 7.510e-64
Identity = 106/235 (45.11%), Postives = 162/235 (68.94%), Query Frame = 0
Query:   59 VQPALAAAKFSKKTVSEKLSQVPVFAVTNASGQPYLAKMDGSGSQIGLIFFSHHDALNMLKDMKKNPGASDARVYIMGLDKAYEMVKAKPTPSGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMRLSSSVQGVPVFVAKGLTLRKGNENIVPLFLTKEDLDASWEKLRETNKDLPNSAPVVVGNLLYIIQQMENDEQPELKNLGFFAPRASVEYVSKEQAGPTGQARLHQNPV 293
            V+ ALA   +  K++  KL+QVPVF +T+A GQPYLA ++ S  Q+GLIFFS  DA  +++ MK N GA +AR++ + LDKA EMVKAKPTPSG++  GG+++ MVFR YPD+ QVK A  +  + + +S+   +P+FVA+GL +RKG E + P+F TKEDL+++W +LR  N  LP    + V +L  I+++MEN ++  L+  GF+ P  SV ++ +++   +G+ R+H NP+
Sbjct:   74 VESALAGTLYKNKSIVGKLAQVPVFLITSAGGQPYLATLEES-RQVGLIFFSIEDATKVMEQMKMNAGAEEARIFPLTLDKAMEMVKAKPTPSGLKSQGGQDLMMVFRLYPDTAQVKNAGSVLGRRQGASNT--IPLFVARGLVVRKGREEVQPMFFTKEDLESNWNRLRSENPKLPRRPNIEVYSLQDIVEKMENGDEA-LRGWGFYPPSRSVSFMEEQKEKKSGKTRMHINPL 304          
BLAST of Gchil5233.t1 vs. uniprot
Match: M2XPU8_GALSU (Chloroplast inner membrane import protein Tic22 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XPU8_GALSU)

HSP 1 Score: 206 bits (523), Expect = 4.120e-61
Identity = 100/221 (45.25%), Postives = 149/221 (67.42%), Query Frame = 0
Query:   60 QPALAAAKFSKKTVSEKLSQVPVFAVTNASGQPYLAKMDGSGSQIGLIFFSHHDALNMLKDMKKNPGASDARVYIMGLDKAYEMVKAKPTPSGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMRLSSSVQGVPVFVAKGLTLRKGNENIVPLFLTKEDLDASWEKLRETNKDLPNSAPVVVGNLLYIIQQMENDEQPELKNLGFFAPRASVEYVSKEQA 280
            QP LAA    KK +  KLSQVPVFAVTN+ GQPYL +      Q G IFFS  DA  M+  +K+  G  D +++++GLDKAYEMV   PT SG++   G E+ M F  +PDS+QV+ A  L ++ +   +  G+PVFVA+GL LRKG+E+ VP+FL K+DL+ +W++LRE++K LP    + + +L  +++++E  ++ EL++LGFFA R S+E++   Q+
Sbjct:  100 QPVLAAGLKVKKNLKSKLSQVPVFAVTNSDGQPYLVEDGNDKVQKGYIFFSPEDAGRMMTKVKQANGTEDIQIHVIGLDKAYEMVSNPPTSSGLKDEEGRELMMTFLLHPDSEQVQKARELLKREKKKPAFDGIPVFVARGLMLRKGDESNVPVFLDKDDLELAWKRLRESDKSLPQHPVIEIADLFQLLKEIEKGDKEELRSLGFFASRKSIEWIRNHQS 320          
BLAST of Gchil5233.t1 vs. uniprot
Match: F2HH75_9CRYP (Translocator of the inner chloroplast membrane n=1 Tax=Cryptomonas paramecium TaxID=2898 RepID=F2HH75_9CRYP)

HSP 1 Score: 191 bits (484), Expect = 1.580e-55
Identity = 100/218 (45.87%), Postives = 142/218 (65.14%), Query Frame = 0
Query:   61 PALAAAKFSKKTVSEKLSQVPVFAVTNASGQPYLAKMDGSGSQIGLIFFSHHDALNMLKDMKKNPGASDARVYIMGLDKAYEMVKAKPTPSGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMRLSSSVQGVPVFVAKGLTLRKGNENIVPLFLTKEDLDASWEKLRETNKDLPNSAPVVVGNLLYIIQQMENDEQPELKNLGFFAPRASVEYVSKE 278
            P  + A+FS K   +KLSQ+PVFA+TN+SGQPYL        QIGLIFFSH DAL +L  MK     SDAR+YIMGLD+AY MV A  T + +     ++   +FRFYPD KQVK A  +  K+    +++ +PVFVA GL ++KG +++ P+F +KEDL+ +W+K+   N D+     V+V +LL I++ MENDE+   K  GFF  + ++E++ KE
Sbjct:   79 PFFSHARFSSKNYYQKLSQIPVFAITNSSGQPYLTT-GPEKEQIGLIFFSHEDALALLTAMKNTHQVSDARIYIMGLDRAYRMVTADKTKNQLN----QDFKTIFRFYPDQKQVKNASLIVNKLNFYKTIRDIPVFVADGLVVKKGKDSMTPVFFSKEDLEKTWKKMISENPDINVKPTVLVVDLLKILKAMENDEKIFSK-FGFFPSQKNIEFIKKE 290          
The following BLAST results are available for this feature:
BLAST of Gchil5233.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QF31_CHOCR1.860e-14586.86Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IZ91_9FLOR4.130e-13394.58Protein TIC 22, chloroplastic n=1 Tax=Gracilariops... [more]
A0A7S0MD44_9CRYP5.240e-7253.99Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
M1URJ3_CYAM11.030e-6848.80Similar to chloroplast inner membrane protein Tic2... [more]
A0A5J4Z7G8_PORPP2.990e-6847.97Protein TIC 22, chloroplastic n=1 Tax=Porphyridium... [more]
A0A7J7IP27_9RHOD5.140e-6849.17Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A1X6NSW5_PORUM4.300e-6754.50Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S3A3T2_9RHOD7.510e-6445.11Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M2XPU8_GALSU4.120e-6145.25Chloroplast inner membrane import protein Tic22 n=... [more]
F2HH75_9CRYP1.580e-5545.87Translocator of the inner chloroplast membrane n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.1350.100coord: 72..277
e-value: 6.7E-42
score: 145.4
NoneNo IPR availableGENE3D3.40.1350.100coord: 169..266
e-value: 6.7E-42
score: 145.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 276..299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 283..299
NoneNo IPR availablePANTHERPTHR33926:SF4PROTEIN TIC 22, CHLOROPLASTICcoord: 49..284
IPR007378Tic22-likePFAMPF04278Tic22coord: 30..272
e-value: 9.9E-34
score: 116.7
IPR007378Tic22-likePANTHERPTHR33926PROTEIN TIC 22, CHLOROPLASTICcoord: 49..284

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:107956..108855 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5233.t1Gchil5233.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 107956..108855 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5233.t1 ID=Gchil5233.t1|Name=Gchil5233.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=300bp
MSASRHDSVSYNDSCPNAFPWRSIAISTTAATLATIVTPILQTSFQSPQT
SIASTATLVQPALAAAKFSKKTVSEKLSQVPVFAVTNASGQPYLAKMDGS
GSQIGLIFFSHHDALNMLKDMKKNPGASDARVYIMGLDKAYEMVKAKPTP
SGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMRLSSSVQGVPVFVAKG
LTLRKGNENIVPLFLTKEDLDASWEKLRETNKDLPNSAPVVVGNLLYIIQ
QMENDEQPELKNLGFFAPRASVEYVSKEQAGPTGQARLHQNPVNPQQSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007378Tic22-like