Gchil5231.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5231.t1
Unique NameGchil5231.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length276
Homology
BLAST of Gchil5231.t1 vs. uniprot
Match: A0A2V3IZ75_9FLOR (Ribosomal RNA large subunit methyltransferase H n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ75_9FLOR)

HSP 1 Score: 193 bits (491), Expect = 2.310e-58
Identity = 101/188 (53.72%), Postives = 129/188 (68.62%), Query Frame = 0
Query:    1 MLMLFSSPGTRNLYGSLLGNRLNCSRPKPVSFEHSKTIHIRAKLKVDIIRIGKKSGKDAIYDSLVSEYAKRLSRVISIHEKYAKCEAAPILVRDLAQRESIMLMDENGTMPRDSVHFSEMVFAALELGGSRLSIVIGDADGLPNNVLAIKSPRIQKVSLSPLTFTHKMVRLFIYEQLYRAAEIRKNNS 188
            ML++    G   L GS + N+L  ++       H+K+    AKLKV +I IGK+SGKDA++D LV+EY KR+S VI                      E++MLMDE+G MPRDS+HFSEM+FAALE GGSRLS+++GDADGLP +VL +++ R+QKVSLSPLTFTHKM RLFIYEQLYRA EIR N+ 
Sbjct:    1 MLLVRPYIGAGLLGGSFVRNKLCTTKEALKPVRHAKSATFHAKLKVQLITIGKRSGKDAVFDPLVAEYTKRMSNVIXXXXXXXXXXXXXXXXXXXXXXEAVMLMDEHGPMPRDSIHFSEMIFAALERGGSRLSMIVGDADGLPLSVLEVQNSRVQKVSLSPLTFTHKMARLFIYEQLYRATEIRNNSK 188          
BLAST of Gchil5231.t1 vs. uniprot
Match: A0A1X6PD06_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PD06_PORUM)

HSP 1 Score: 97.4 bits (241), Expect = 8.020e-21
Identity = 62/166 (37.35%), Postives = 95/166 (57.23%), Query Frame = 0
Query:   42 AKLKVDIIRIGKKSGKDAIYDSLVSEYAKRLSRVISIHEKY-AKCEAAPILVRDLAQRES-----------IMLMDENGTMPRDSVHFSEMVFAALELGGSRLSIVIGDADGL-PNNVLAIKSPR------IQKVSLSPLTFTHKMVRLFIYEQLYRAAEIRKNNS 188
            AK +V+++ +G++S KDA+YDS V  Y  R    + I  ++ A   AA  L+   + R             ++ +DE G+ P  S  F+ +++  LE GGSRL  VIG+ADGL P    A+++        ++ +SLSPLT  HK+VRL + EQLYRA+EIR+ + 
Sbjct:   47 AKARVEVVTLGRRSTKDAVYDSAVDMYITRAGPRLDIACRWVAPATAAAALLPSGSDRAGGGKATAGPRAHVICLDEGGSAPASSDAFATLLYDRLERGGSRLVFVIGEADGLSPAFREAVRAAGRGPAGGVEALSLSPLTLPHKLVRLVLVEQLYRASEIRRGSK 212          
BLAST of Gchil5231.t1 vs. uniprot
Match: A0A2E3LZ89_9BACT (Ribosomal RNA large subunit methyltransferase H n=1 Tax=Waddliaceae bacterium TaxID=2026802 RepID=A0A2E3LZ89_9BACT)

HSP 1 Score: 90.9 bits (224), Expect = 3.800e-19
Identity = 57/145 (39.31%), Postives = 84/145 (57.93%), Query Frame = 0
Query:   44 LKVDIIRIGKKSGKDAIYDSLVSEYAKRLSRVISIHEKYAKCEAAPILVRDLAQRESIMLMDENGTMPRDSVHFSEMVFAALELGGSRLSIVIGDADGLPNNVLAIKSPRIQKVSLSPLTFTHKMVRLFIYEQLYRAAEIRKNNS 188
            LK+ II +G+   K+A  ++ V +Y KRLS   SI     K      L++ + +  SI+ +D  G    +S  F  ++F  LE GGSR++ VIG A+GLP+ +      +   +SLSPLTFTH++ RL + EQ+YRA EIRK   
Sbjct:    2 LKIKIILVGR--TKEAWLENAVQDYVKRLSSSTSIEWLVLKTNEQ--LIKQIDKERSILCLDPLGEKV-NSERFCTLLFQQLETGGSRVTFVIGGAEGLPDQI----RKKHTLISLSPLTFTHQIARLILIEQIYRAFEIRKGTG 137          
BLAST of Gchil5231.t1 vs. uniprot
Match: A0A7W1RFH9_9BACT (Ribosomal RNA large subunit methyltransferase H n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1RFH9_9BACT)

HSP 1 Score: 90.5 bits (223), Expect = 5.320e-19
Identity = 60/144 (41.67%), Postives = 90/144 (62.50%), Query Frame = 0
Query:   45 KVDIIRIGKKSGKDAIYDSLVSEYAKRLSRVISIHEKYAKCEAAPILVRDLAQRE-SIMLMDENGTMPRDSVHFSEMVFAALELGGSRLSIVIGDADGLPNNVLAIKSPRIQKVSLSPLTFTHKMVRLFIYEQLYRAAEIRKNN 187
            K+ I+ IGK   K++  +  + EY KRLS++I I   +AK +   +    LA +E +++ +D NG M  +S  FS  +    E GGSRL+IVIG A+GLP  +   + P +  +SLSP+TFTH++VRL + EQ+YRA EI K +
Sbjct:    3 KLRILSIGK--TKESWLEEAIDEYLKRLSKIICIEFVWAKNDEQLLA---LASKEPTLVCLDANGKM-MNSEAFSTFIVKKFEEGGSRLAIVIGGAEGLPTKLK--QHPTL--ISLSPMTFTHQLVRLVLVEQIYRAFEIDKGS 136          
BLAST of Gchil5231.t1 vs. uniprot
Match: A0A7S0ZKI4_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZKI4_9RHOD)

HSP 1 Score: 91.7 bits (226), Expect = 1.060e-18
Identity = 57/157 (36.31%), Postives = 92/157 (58.60%), Query Frame = 0
Query:   44 LKVDIIRIGKKSGKDAIYDSLVSEYAKRL--SRVISIHEKYAKCEAAPILVRDLAQRES---IMLMDENGTMPRDSVHFSEMVFAALELGGSRLSIVIGDADGLPNNVLAIKS-PRIQKV------SLSPLTFTHKMVRLFIYEQLYRAAEIRKNNS 188
            L V+++ +G+ S K+A  +  V EY  RL  S  I +   Y +   A + +    Q++    ++ MDE+ + P  S  F++ ++  LE+GGSR + V+G A+GLP+ + + +  P  Q++      SLSPLT THK+ RL + EQ+YRAAEIRK + 
Sbjct:   51 LHVNVVSVGRASQKEAWAEIPVEEYQTRLKGSNAIDLELTYVRDNDALLRLLRNGQKKRLGCVIAMDEHCSAPSSSEKFADQLYTWLEIGGSRSTFVVGGAEGLPDEIKSEQYLPVSQRILAHHFLSLSPLTLTHKIARLVLVEQIYRAAEIRKGSK 207          
BLAST of Gchil5231.t1 vs. uniprot
Match: A0A5J4YMA3_PORPP (Ribosomal RNA large subunit methyltransferase H n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YMA3_PORPP)

HSP 1 Score: 94.4 bits (233), Expect = 3.190e-18
Identity = 60/159 (37.74%), Postives = 88/159 (55.35%), Query Frame = 0
Query:   40 IRAKLKVDIIRIGKKSGKDAIYDSLVSEYAKRL--SRVISIHEKYAKCEAAPILVRDL-AQRESIMLMDENGTMPRDSVHFSEMVFAALELGGSRLSIVIGDADGLPNNVLA-IKSPRIQK------VSLSPLTFTHKMVRLFIYEQLYRAAEIRKNNS 188
            +R  + V ++ +GKKS K+A  +  V+E+A R+  S  + +   Y K     +   D   QR  ++ +DE G  P  S  F+E+ +   ELG S ++ VIG ADGLP  +     +PR ++      +SLS LTFTHKM R  I EQ+YRA EIRK + 
Sbjct:  348 VRCLVHVSVLTVGKKSAKEAWAEVPVAEHATRMRGSNAVDLKADYIKDNETLVARLDGDKQRGYVVALDECGDAPGSSAQFAELFYKWAELGNSHITFVIGGADGLPYVIKQDAAAPRTKRKYVQHFLSLSELTFTHKMARALICEQIYRATEIRKGSG 506          
BLAST of Gchil5231.t1 vs. uniprot
Match: A0A1F8JND2_9BACT (Ribosomal RNA large subunit methyltransferase H n=1 Tax=Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_9 TaxID=1797605 RepID=A0A1F8JND2_9BACT)

HSP 1 Score: 87.4 bits (215), Expect = 7.980e-18
Identity = 59/145 (40.69%), Postives = 86/145 (59.31%), Query Frame = 0
Query:   45 KVDIIRIGKKSGKDAIYDSLVSEYAKRLSRVISIHEKYAKCEAAPILVRDLAQRESIML-MDENGTMPRDSVHFSEMVFAALELGGSRLSIVIGDADGLPNNVLAIKSPRIQKVSLSPLTFTHKMVRLFIYEQLYRAAEIRKNNS 188
            KV I+ +GK   ++      + EY KRLSR++ +    AK    P L+ DLA+ E+ ++ +D  G +   S  FS+    AL   G+RL+ +IGDADG P+ +L   +    + SLSPLTFTH+MVRL + EQ+YRA EI K + 
Sbjct:    3 KVKILTVGK--SREIWLKEALEEYEKRLSRILKLEWSIAKDR--PQLI-DLAKNETALIALDLQGEL-LSSEDFSQKFTLALIEKGARLTFIIGDADGFPDELL---NRSFWRWSLSPLTFTHQMVRLILIEQIYRALEIEKKSG 138          
BLAST of Gchil5231.t1 vs. uniprot
Match: A0A7S0I6P0_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I6P0_9EUKA)

HSP 1 Score: 87.4 bits (215), Expect = 2.440e-17
Identity = 58/149 (38.93%), Postives = 84/149 (56.38%), Query Frame = 0
Query:   40 IRAKLKVDIIRIGKKSGKDAIYDSLVSEYAKRLSRVISIHEKYAKCEAAPILVRDLAQRESIMLMDENGTMPRDSVHFSEMVFAALELGGSRLSIVIGDADGLPNNVLAIKSPRIQKVSLSPLTFTHKMVRLFIYEQLYRAAEIRKNNS 188
            +R   +V I+  GK   K+   +  +  Y  RL   + +   + + +AA  LV+      S++ +D  G     S  F+E++FAA+E GGSRLS +IG A+GLP  V A  +     VSLS LTFTH+M RL + EQ+YRA EIRK + 
Sbjct:   45 VRCGPRVRIVSPGK--NKERWLEDAIELYTTRLRGTLELECVWVRDDAA--LVKQARDAGSVIALDPLGKTCT-SEEFAELLFAAIERGGSRLSFIIGGAEGLPKEVRADAT----LVSLSRLTFTHQMARLVLAEQIYRATEIRKGSG 184          
BLAST of Gchil5231.t1 vs. uniprot
Match: A0A1M3BF22_9CHLA (Ribosomal RNA large subunit methyltransferase H n=1 Tax=Chlamydia sp. 32-24 TaxID=1895742 RepID=A0A1M3BF22_9CHLA)

HSP 1 Score: 85.1 bits (209), Expect = 6.080e-17
Identity = 57/143 (39.86%), Postives = 86/143 (60.14%), Query Frame = 0
Query:   45 KVDIIRIGKKSGKDAIYDSLVSEYAKRLSRVISIHEKYAKCEAAPILVRDLAQRESIMLMDENGTMPRDSVHFSEMVFAALELGGSRLSIVIGDADGLPNNVLAIKSPRIQKVSLSPLTFTHKMVRLFIYEQLYRAAEIRKNN 187
            K+ II IGK   K+   ++ ++EY KRL +++     +AK     + + +   ++SI+ +D NG    DS+ FS+ +   L    SRL+ VIG A+GLP   L++KS   + VSLS LT TH++ RLF+ EQLYRA EI K +
Sbjct:    3 KIKIISIGK--NKETWLENALAEYKKRLCQLVEFTFIWAKDNDHLLQIIEKESKQSIICLDPNGK-EFDSLQFSKFIQDRLIKADSRLAFVIGGAEGLP---LSLKSGY-ELVSLSRLTMTHQLTRLFLIEQLYRAFEIAKGS 138          
BLAST of Gchil5231.t1 vs. uniprot
Match: A0A0U5JCM2_9BACT (Ribosomal RNA large subunit methyltransferase H n=1 Tax=Candidatus Protochlamydia naegleriophila TaxID=389348 RepID=A0A0U5JCM2_9BACT)

HSP 1 Score: 84.7 bits (208), Expect = 8.060e-17
Identity = 57/146 (39.04%), Postives = 91/146 (62.33%), Query Frame = 0
Query:   44 LKVDIIRIGKKSGKDAIYDSLVSEYAKRLSRVISIHEKYAKCEAAPILVRDLAQRESIML-MDENGTMPRDSVHFSEMVFAALELGGSRLSIVIGDADGLPNNVLAIKSPRIQKVSLSPLTFTHKMVRLFIYEQLYRAAEIRKNNS 188
            LK+ I+ +GK   K+   D    EY KRL  ++ +  ++AK +++ +L  D A +E  ++ +D  G +   S  F+ ++  + + GGSRL+IVIG A+GLP   L +K    Q +SLSPLTFTH++ RL + EQ+YRA EI+K ++
Sbjct:    2 LKLKILSVGK--TKEKWLDEAFGEYQKRLKPLMQVDCQWAK-DSSQLL--DWALKEPYLICLDPTGCL-LSSEQFATLIEQSWDRGGSRLTIVIGGAEGLP---LELKQ-NAQLISLSPLTFTHQITRLVLIEQIYRATEIQKGSN 137          
The following BLAST results are available for this feature:
BLAST of Gchil5231.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZ75_9FLOR2.310e-5853.72Ribosomal RNA large subunit methyltransferase H n=... [more]
A0A1X6PD06_PORUM8.020e-2137.35Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A2E3LZ89_9BACT3.800e-1939.31Ribosomal RNA large subunit methyltransferase H n=... [more]
A0A7W1RFH9_9BACT5.320e-1941.67Ribosomal RNA large subunit methyltransferase H n=... [more]
A0A7S0ZKI4_9RHOD1.060e-1836.31Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4YMA3_PORPP3.190e-1837.74Ribosomal RNA large subunit methyltransferase H n=... [more]
A0A1F8JND2_9BACT7.980e-1840.69Ribosomal RNA large subunit methyltransferase H n=... [more]
A0A7S0I6P0_9EUKA2.440e-1738.93Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A1M3BF22_9CHLA6.080e-1739.86Ribosomal RNA large subunit methyltransferase H n=... [more]
A0A0U5JCM2_9BACT8.060e-1739.04Ribosomal RNA large subunit methyltransferase H n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 271..275
IPR003742RNA methyltransferase RlmHPFAMPF02590SPOUT_MTasecoord: 45..187
e-value: 2.3E-23
score: 82.9
IPR003742RNA methyltransferase RlmHPANTHERPTHR33603METHYLTRANSFERASEcoord: 28..187
IPR003742RNA methyltransferase RlmHCDDcd18081RlmH-likecoord: 48..186
e-value: 9.25309E-32
score: 112.92
IPR029026tRNA (guanine-N1-)-methyltransferase, N-terminalGENE3D3.40.1280.10coord: 44..188
e-value: 1.6E-28
score: 101.3
IPR029028Alpha/beta knot methyltransferasesSUPERFAMILY75217alpha/beta knotcoord: 45..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:105291..106327 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5231.t1Gchil5231.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 105291..106327 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5231.t1 ID=Gchil5231.t1|Name=Gchil5231.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=276bp
MLMLFSSPGTRNLYGSLLGNRLNCSRPKPVSFEHSKTIHIRAKLKVDIIR
IGKKSGKDAIYDSLVSEYAKRLSRVISIHEKYAKCEAAPILVRDLAQRES
IMLMDENGTMPRDSVHFSEMVFAALELGGSRLSIVIGDADGLPNNVLAIK
SPRIQKVSLSPLTFTHKMVRLFIYEQLYRAAEIRKNNSGVGGVTGVVGTC
WFCLAGIGLASIFSFSVSSPGSSRVSFESSCKSPIGVEITGENETALFGR
GLRMSSENCFVWLGFSLNRLVAEQS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003742RlmH-like
IPR029026tRNA_m1G_MTases_N
IPR029028Alpha/beta_knot_MTases