Gchil523.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil523.t1
Unique NameGchil523.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length150
Homology
BLAST of Gchil523.t1 vs. uniprot
Match: A0A2V3IPR5_9FLOR (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPR5_9FLOR)

HSP 1 Score: 190 bits (483), Expect = 2.980e-60
Identity = 88/110 (80.00%), Postives = 100/110 (90.91%), Query Frame = 0
Query:   40 MLRRSLVPLQRLASRSLSTPARRPHMHLPLGAVPDDTDLQSVRSKWGSDAMEKIQSTDIIEVDADVAVCNGGGGALGHPIEYIKLYVSDEHAGPQVCKYCGLKFARKNHH 149
            MLRR+++P+Q LA R+LSTPARRP  HLPLG VPDDTDL SVRSKWGSDAM+KIQ+TD+IEVD DVA+CNGGGGALGHPIEYIKL+VSDE A PQVCKYCGLKF RK+H+
Sbjct:    1 MLRRAIMPVQVLARRALSTPARRPRKHLPLGVVPDDTDLGSVRSKWGSDAMDKIQNTDVIEVDGDVAICNGGGGALGHPIEYIKLHVSDEDAAPQVCKYCGLKFVRKHHY 110          
BLAST of Gchil523.t1 vs. uniprot
Match: R7QQI5_CHOCR (NADH-ubiquinone oxidoreductase subunit iron-sulfur protein 6 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQI5_CHOCR)

HSP 1 Score: 159 bits (401), Expect = 9.690e-48
Identity = 79/111 (71.17%), Postives = 87/111 (78.38%), Query Frame = 0
Query:   40 MLRRSLVPLQRLASRSLST--PARRPHMHLPLGAVPDDTDLQSVRSKWGSDAMEKIQSTDIIEVDADVAVCNGGGGALGHPIEYIKLYVSDEHAGPQVCKYCGLKFARKNH 148
            MLRR+LVP + +  R+LS     RRP MH PLG+VP  TD + VRSKWGSDAM+KIQ T   EVD DVA CNGGGGALGHPIEYIKL VSDE AGPQVCKYCGLKF RK+H
Sbjct:    1 MLRRALVPARGVLRRALSDGPTTRRPRMHQPLGSVPAGTDPELVRSKWGSDAMDKIQETAATEVDGDVAACNGGGGALGHPIEYIKLLVSDEDAGPQVCKYCGLKFLRKHH 111          
BLAST of Gchil523.t1 vs. uniprot
Match: A0A7S0T4V0_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T4V0_9RHOD)

HSP 1 Score: 108 bits (271), Expect = 1.220e-27
Identity = 54/98 (55.10%), Postives = 67/98 (68.37%), Query Frame = 0
Query:   51 LASRSLSTPARRPHMHLPLGAVPDDTDLQSVRSKWGSDAMEKIQSTDIIEVDADVAVCNGGGGALGHPIEYIKLYVSDEHAGPQVCKYCGLKFARKNH 148
            L S    +  ++  MHLPLG+VPD TDL  VR KWGS+AM+ IQ    IEV+ +VAVC+GGGGA GHPIEYIKL    +   P VCKYCGL++  K +
Sbjct:   44 LFSSESDSQKKQSFMHLPLGSVPDGTDLSVVRHKWGSNAMDLIQQVPPIEVEGNVAVCDGGGGAEGHPIEYIKL----DSPYPAVCKYCGLRYVSKKY 137          
BLAST of Gchil523.t1 vs. uniprot
Match: A0A5J4Z2H0_PORPP (NADH dehydrogenase ubiquinone iron-sulfur protein 6, mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2H0_PORPP)

HSP 1 Score: 99.0 bits (245), Expect = 8.650e-24
Identity = 58/121 (47.93%), Postives = 72/121 (59.50%), Query Frame = 0
Query:   30 GVPVPLHRFAMLRRSLVPLQRLASRSLSTPARRPHMHLPLGAVPDDTDLQSVRSKWGSDAMEKIQSTDIIEVDADVAVCNGGGG-ALGHPIEYIKLYVSDEHAGPQVCKYCGLKFARKNHH 149
            G  + L  FA  R       R  S     P+R    HLPLG VP+ TD   V+SKWGS+AM+ IQ    I VD +V VC+GGG  ++GHPIE+IKL    +   P VCKYCGL++ARKN H
Sbjct:   23 GARLALGGFATTRAGQQGWTRFGSSD--APSR--FAHLPLGQVPEGTDPSQVKSKWGSNAMDMIQQVAPILVDGNVVVCDGGGDPSVGHPIEFIKL----DMPYPAVCKYCGLRYARKNAH 135          
BLAST of Gchil523.t1 vs. uniprot
Match: A0A485KN93_9STRA (Aste57867_9463 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KN93_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 8.320e-18
Identity = 41/64 (64.06%), Postives = 48/64 (75.00%), Query Frame = 0
Query:   87 SDAMEKIQSTDIIEVDADVAVCNGGGGALGHPIEYIKL-YVSDEHAGPQVCKYCGLKFARKNHH 149
            SDA  +I    +IEVD+D AVC+GGGGALGHP+EYI L  VSDE   PQ CKYCGL+F  K+HH
Sbjct:   58 SDAEIRIAQVPVIEVDSDTAVCDGGGGALGHPLEYIALNIVSDE---PQTCKYCGLRFKMKHHH 118          
BLAST of Gchil523.t1 vs. uniprot
Match: W4FPE3_9STRA (zf-CHCC domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FPE3_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.120e-17
Identity = 39/64 (60.94%), Postives = 50/64 (78.12%), Query Frame = 0
Query:   87 SDAMEKIQSTDIIEVDADVAVCNGGGGALGHPIEYIKL-YVSDEHAGPQVCKYCGLKFARKNHH 149
            SDA  +I    ++EVD+DVAVC+GGGGALGHP+EYI L  VSD+   PQ CKYCGL++ +K+HH
Sbjct:   56 SDAELRIAQVPVVEVDSDVAVCDGGGGALGHPVEYIALNIVSDK---PQTCKYCGLRYKQKHHH 116          
BLAST of Gchil523.t1 vs. uniprot
Match: A0A2D4BTY1_PYTIN (zf-CHCC domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BTY1_PYTIN)

HSP 1 Score: 82.8 bits (203), Expect = 1.530e-17
Identity = 48/114 (42.11%), Postives = 65/114 (57.02%), Query Frame = 0
Query:   40 MLRRSLVPLQRLASRSLSTPARRPHM-------HLPLGAVPDDTDLQSVRSKWGSDAMEKIQSTDIIEVDADVAVCNGGGGALGHPIEYIKLYVSDEHAGPQVCKYCGLKFARK 146
            MLR S   L R A RS +TPA R  M             + D+       ++  SDA ++I    I++V+ DVAVC+GGGGALGHP+EYI+L     H  PQ CKYCG+++ +K
Sbjct:    9 MLRSSSRLLVRAARRSAATPATRNVMASIASQQRAGFATIYDNKMPYEDVNRHRSDAEQRIAQVPIVDVEGDVAVCDGGGGALGHPLEYIQLDTV-RHNEPQTCKYCGIRYRKK 121          
BLAST of Gchil523.t1 vs. uniprot
Match: A0A1W0A7P4_9STRA (zf-CHCC domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7P4_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 5.360e-17
Identity = 37/63 (58.73%), Postives = 46/63 (73.02%), Query Frame = 0
Query:   87 SDAMEKIQSTDIIEVDADVAVCNGGGGALGHPIEYIKLYVSDEHAGPQVCKYCGLKFARKNHH 149
            SDA  +I    +IEVD D AVC+GGGGALGHP+EYI L +  +   PQVCKYCGL+F + +HH
Sbjct:   51 SDAEIRIAQVPVIEVDGDTAVCDGGGGALGHPLEYIALDIVSKE--PQVCKYCGLRFKKSHHH 111          
BLAST of Gchil523.t1 vs. uniprot
Match: A0A6G0WCA7_9STRA (zf-CHCC domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCA7_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 7.580e-17
Identity = 39/64 (60.94%), Postives = 48/64 (75.00%), Query Frame = 0
Query:   87 SDAMEKIQSTDIIEVDADVAVCNGGGGALGHPIEYIKLY-VSDEHAGPQVCKYCGLKFARKNHH 149
            SDA  +I    ++EVD DVAVC+GGGGALGHP+EYI+L  VS E   PQ CKYCGL++  K+HH
Sbjct:   51 SDAELRIAKVPVVEVDTDVAVCDGGGGALGHPLEYIQLNTVSKE---PQTCKYCGLRYKMKHHH 111          
BLAST of Gchil523.t1 vs. uniprot
Match: A0A024TS26_9STRA (zf-CHCC domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TS26_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 2.500e-16
Identity = 39/64 (60.94%), Postives = 48/64 (75.00%), Query Frame = 0
Query:   87 SDAMEKIQSTDIIEVDADVAVCNGGGGALGHPIEYIKLY-VSDEHAGPQVCKYCGLKFARKNHH 149
            SDA   I    ++EVD+DVAVC+GGGGALGHP+EYI L  VSD+   PQ CKYCGL++ +K HH
Sbjct:   55 SDAEILIAQVPVVEVDSDVAVCDGGGGALGHPLEYIALNTVSDK---PQTCKYCGLRYKQKPHH 115          
The following BLAST results are available for this feature:
BLAST of Gchil523.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPR5_9FLOR2.980e-6080.00NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
R7QQI5_CHOCR9.690e-4871.17NADH-ubiquinone oxidoreductase subunit iron-sulfur... [more]
A0A7S0T4V0_9RHOD1.220e-2755.10Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A5J4Z2H0_PORPP8.650e-2447.93NADH dehydrogenase ubiquinone iron-sulfur protein ... [more]
A0A485KN93_9STRA8.320e-1864.06Aste57867_9463 protein n=1 Tax=Aphanomyces stellat... [more]
W4FPE3_9STRA1.120e-1760.94zf-CHCC domain-containing protein n=4 Tax=Aphanomy... [more]
A0A2D4BTY1_PYTIN1.530e-1742.11zf-CHCC domain-containing protein (Fragment) n=1 T... [more]
A0A1W0A7P4_9STRA5.360e-1758.73zf-CHCC domain-containing protein n=1 Tax=Thrausto... [more]
A0A6G0WCA7_9STRA7.580e-1760.94zf-CHCC domain-containing protein n=1 Tax=Aphanomy... [more]
A0A024TS26_9STRA2.500e-1660.94zf-CHCC domain-containing protein n=1 Tax=Aphanomy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.260.40q5lls5 like domainscoord: 96..149
e-value: 7.9E-16
score: 59.5
NoneNo IPR availablePANTHERPTHR13156NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-A SUBUNITcoord: 88..149
NoneNo IPR availablePANTHERPTHR13156:SF0NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 6, MITOCHONDRIALcoord: 88..149
IPR019401Zinc finger, CHCC-typePFAMPF10276zf-CHCCcoord: 104..143
e-value: 7.4E-13
score: 48.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000060_piloncontigtig00000060_pilon:699257..699706 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil523.t1Gchil523.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000060_pilon 699257..699706 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil523.t1 ID=Gchil523.t1|Name=Gchil523.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=150bp
MRCAQPQHAAAVRKQLADTVSASPSIVNLGVPVPLHRFAMLRRSLVPLQR
LASRSLSTPARRPHMHLPLGAVPDDTDLQSVRSKWGSDAMEKIQSTDIIE
VDADVAVCNGGGGALGHPIEYIKLYVSDEHAGPQVCKYCGLKFARKNHH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019401Znf_CHCC